RNA–Protein interactions for RNA: ENST00000533279.1

GMDS-210, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-210ENST00000533279 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.49■□□□□ 0.071e-6■■□□□ 12.3
GMDS-210ENST00000533279 SBNO1A3KN83 1393 aa15.48■□□□□ 0.07
GMDS-210ENST00000533279 ARHGEF10O15013 1369 aa15.48■□□□□ 0.07
GMDS-210ENST00000533279 TTC21BQ7Z4L5 1316 aa15.47■□□□□ 0.07
GMDS-210ENST00000533279 CD163L1Q9NR16 1453 aa15.47■□□□□ 0.07
GMDS-210ENST00000533279 ANP32CO43423 234 aa15.47■□□□□ 0.07
GMDS-210ENST00000533279 XPCQ01831 940 aaPredicted RBP15.46■□□□□ 0.07
GMDS-210ENST00000533279 COG3Q96JB2 828 aa15.46■□□□□ 0.07
GMDS-210ENST00000533279 NHSL1Q5SYE7 1610 aa15.46■□□□□ 0.06
GMDS-210ENST00000533279 AHDC1Q5TGY3 1603 aaPredicted RBP15.46■□□□□ 0.06
GMDS-210ENST00000533279 DIEXFQ68CQ4 756 aaKnown RBP15.45■□□□□ 0.06
GMDS-210ENST00000533279 ABTB2Q8N961 1025 aa15.45■□□□□ 0.06
GMDS-210ENST00000533279 LRRC59Q96AG4 307 aaKnown RBP15.45■□□□□ 0.06
GMDS-210ENST00000533279 TNS3Q68CZ2 1445 aa15.44■□□□□ 0.06
GMDS-210ENST00000533279 HAP1P54257 671 aaPredicted RBP15.44■□□□□ 0.06
GMDS-210ENST00000533279 NLRP13Q86W25 1043 aa15.44■□□□□ 0.06
GMDS-210ENST00000533279 NPC1L1Q9UHC9 1359 aa15.44■□□□□ 0.06
GMDS-210ENST00000533279 SOS2Q07890 1332 aaPredicted RBP15.43■□□□□ 0.06
GMDS-210ENST00000533279 PHLPP1O60346 1717 aa15.43■□□□□ 0.06
GMDS-210ENST00000533279 KIF20BQ96Q89 1820 aa15.43■□□□□ 0.06
GMDS-210ENST00000533279 CNGB1Q14028 1251 aaPredicted RBP15.43■□□□□ 0.06
GMDS-210ENST00000533279 CC2D1BQ5T0F9 858 aaKnown RBP15.43■□□□□ 0.06
GMDS-210ENST00000533279 CARD14Q9BXL6 1004 aa15.43■□□□□ 0.06
GMDS-210ENST00000533279 PXDNQ92626 1479 aa15.43■□□□□ 0.06
GMDS-210ENST00000533279 NRKQ7Z2Y5 1582 aa15.43■□□□□ 0.06
GMDS-210ENST00000533279 NLRP6P59044 892 aa15.42■□□□□ 0.06
GMDS-210ENST00000533279 MORC1Q86VD1 984 aa15.42■□□□□ 0.06
GMDS-210ENST00000533279 RALBP1Q15311 655 aa15.41■□□□□ 0.06
GMDS-210ENST00000533279 NME9Q86XW9 330 aa15.41■□□□□ 0.06
GMDS-210ENST00000533279 DDX17Q92841 729 aaKnown RBP15.41■□□□□ 0.06
GMDS-210ENST00000533279 SPATA31A3Q5VYP0 1347 aa15.41■□□□□ 0.06
GMDS-210ENST00000533279 PER1O15534 1290 aaPredicted RBP15.4■□□□□ 0.06
GMDS-210ENST00000533279 GGNBP2Q9H3C7 697 aa15.4■□□□□ 0.06
GMDS-210ENST00000533279 SSH2Q76I76 1423 aa15.4■□□□□ 0.06
GMDS-210ENST00000533279 TRPM3Q9HCF6 1732 aaPredicted RBP15.4■□□□□ 0.06
GMDS-210ENST00000533279 FYB1O15117 783 aa15.39■□□□□ 0.05
GMDS-210ENST00000533279 AMER1Q5JTC6 1135 aaPredicted RBP15.39■□□□□ 0.05
GMDS-210ENST00000533279 KCNH5Q8NCM2 988 aa15.39■□□□□ 0.05
GMDS-210ENST00000533279 FBXO41Q8TF61 875 aa15.38■□□□□ 0.05
GMDS-210ENST00000533279 USP31Q70CQ4 1352 aa15.37■□□□□ 0.05
GMDS-210ENST00000533279 NUTM2GQ5VZR2 741 aa15.37■□□□□ 0.05
GMDS-210ENST00000533279 ANKRD26Q9UPS8 1709 aa15.37■□□□□ 0.05
GMDS-210ENST00000533279 PIK3C2AO00443 1686 aa15.36■□□□□ 0.05
GMDS-210ENST00000533279 JCADQ9P266 1359 aa15.36■□□□□ 0.05
GMDS-210ENST00000533279 COL16A1Q07092 1604 aaPredicted RBP15.35■□□□□ 0.05
GMDS-210ENST00000533279 OVOS2A0A0J9YW53 1432 aa15.35■□□□□ 0.05
GMDS-210ENST00000533279 OVOS2Q6IE36 1432 aa15.35■□□□□ 0.05
GMDS-210ENST00000533279 ALS2Q96Q42 1657 aa15.35■□□□□ 0.05
GMDS-210ENST00000533279 PLEKHG5O94827 1062 aa15.35■□□□□ 0.05
GMDS-210ENST00000533279 TNNT2P45379 298 aaPredicted RBP15.34■□□□□ 0.05
GMDS-210ENST00000533279 MED1Q15648 1581 aaPredicted RBP15.33■□□□□ 0.05
GMDS-210ENST00000533279 SOX12O15370 315 aa15.33■□□□□ 0.04
GMDS-210ENST00000533279 CFAP53Q96M91 514 aa15.33■□□□□ 0.04
GMDS-210ENST00000533279 PRKRIP1Q9H875 184 aaPredicted RBP15.33■□□□□ 0.04
GMDS-210ENST00000533279 MYBBP1AQ9BQG0 1328 aaKnown RBP15.33■□□□□ 0.04
GMDS-210ENST00000533279 PARD3Q8TEW0 1356 aa15.33■□□□□ 0.04
GMDS-210ENST00000533279 USP54Q70EL1 1684 aa15.32■□□□□ 0.04
GMDS-210ENST00000533279 HSPA1LP34931 641 aa15.32■□□□□ 0.04
GMDS-210ENST00000533279 USP19O94966 1318 aa15.32■□□□□ 0.04
GMDS-210ENST00000533279 PNPLA6Q8IY17 1366 aa15.32■□□□□ 0.04
GMDS-210ENST00000533279 ZBTB7CA1YPR0 619 aa15.31■□□□□ 0.04
GMDS-210ENST00000533279 GCP02774 474 aa15.3■□□□□ 0.04
GMDS-210ENST00000533279 SHPRHQ149N8 1683 aa15.3■□□□□ 0.04
GMDS-210ENST00000533279 SPATA31A6Q5VVP1 1343 aa15.3■□□□□ 0.04
GMDS-210ENST00000533279 AATKQ6ZMQ8 1374 aa15.3■□□□□ 0.04
GMDS-210ENST00000533279 ZRANB1Q9UGI0 708 aa15.3■□□□□ 0.04
GMDS-210ENST00000533279 COL22A1Q8NFW1 1626 aaPredicted RBP15.29■□□□□ 0.04
GMDS-210ENST00000533279 SLIT3O75094 1523 aa15.29■□□□□ 0.04
GMDS-210ENST00000533279 PPM1GO15355 546 aaPredicted RBP15.29■□□□□ 0.04
GMDS-210ENST00000533279 AMPHP49418 695 aa15.29■□□□□ 0.04
GMDS-210ENST00000533279 PHRF1Q9P1Y6 1649 aaKnown RBP15.28■□□□□ 0.04
GMDS-210ENST00000533279 RTL1A6NKG5 1358 aa15.27■□□□□ 0.04
GMDS-210ENST00000533279 KIF24Q5T7B8 1368 aa15.27■□□□□ 0.04
GMDS-210ENST00000533279 MEX3CQ5U5Q3 659 aaKnown RBP15.27■□□□□ 0.04
GMDS-210ENST00000533279 PRDM11Q9NQV5 511 aa15.27■□□□□ 0.04
GMDS-210ENST00000533279 SMG6Q86US8 1419 aaKnown RBP15.26■□□□□ 0.03
GMDS-210ENST00000533279 NUTM2BA6NNL0 878 aaPredicted RBP15.26■□□□□ 0.03
GMDS-210ENST00000533279 NUTM2EB1AL46 878 aaPredicted RBP15.26■□□□□ 0.03
GMDS-210ENST00000533279 PPP2R1AP30153 589 aa15.26■□□□□ 0.03
GMDS-210ENST00000533279 NUTM2AQ8IVF1 878 aaPredicted RBP15.26■□□□□ 0.03
GMDS-210ENST00000533279 CABLES1Q8TDN4 633 aa15.26■□□□□ 0.03
GMDS-210ENST00000533279 FLT4P35916 1363 aa15.25■□□□□ 0.03
GMDS-210ENST00000533279 ZC3H6P61129 1189 aaKnown RBP15.25■□□□□ 0.03
GMDS-210ENST00000533279 RRS1Q15050 365 aaKnown RBP15.25■□□□□ 0.03
GMDS-210ENST00000533279 CPDO75976 1380 aa15.24■□□□□ 0.03
GMDS-210ENST00000533279 NFAT5O94916 1531 aa15.24■□□□□ 0.03
GMDS-210ENST00000533279 NUDCQ9Y266 331 aa15.24■□□□□ 0.03
GMDS-210ENST00000533279 ABCA3Q99758 1704 aa15.23■□□□□ 0.03
GMDS-210ENST00000533279 ABCC6O95255 1503 aa15.23■□□□□ 0.03
GMDS-210ENST00000533279 MAP3K19Q56UN5 1328 aa15.23■□□□□ 0.03
GMDS-210ENST00000533279 CDK12Q9NYV4 1490 aaPredicted RBP15.23■□□□□ 0.03
GMDS-210ENST00000533279 MTHFSP49914 203 aa15.23■□□□□ 0.03
GMDS-210ENST00000533279 MRS2Q9HD23 443 aa15.23■□□□□ 0.03
GMDS-210ENST00000533279 POLKQ9UBT6 870 aa15.23■□□□□ 0.03
GMDS-210ENST00000533279 KIAA0232Q92628 1395 aa15.23■□□□□ 0.03
GMDS-210ENST00000533279 CCER2I3L3R5 266 aa15.22■□□□□ 0.03
GMDS-210ENST00000533279 ADAMTS2O95450 1211 aa15.22■□□□□ 0.03
GMDS-210ENST00000533279 EMILIN1Q9Y6C2 1016 aa15.22■□□□□ 0.03
GMDS-210ENST00000533279 BLMP54132 1417 aaPredicted RBP15.22■□□□□ 0.03
GMDS-210ENST00000533279 MARF1Q9Y4F3 1742 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms