RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 A0A1W2PP64 1363 aa15.49■□□□□ 0.07
TRAPPC4-211ENST00000533012 CD163L1Q9NR16 1453 aa15.49■□□□□ 0.07
TRAPPC4-211ENST00000533012 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.49■□□□□ 0.07
TRAPPC4-211ENST00000533012 ARHGEF10O15013 1369 aa15.49■□□□□ 0.07
TRAPPC4-211ENST00000533012 TTC21AQ8NDW8 1320 aa15.48■□□□□ 0.07
TRAPPC4-211ENST00000533012 COL16A1Q07092 1604 aaPredicted RBP15.48■□□□□ 0.07
TRAPPC4-211ENST00000533012 NLRP13Q86W25 1043 aa15.48■□□□□ 0.07
TRAPPC4-211ENST00000533012 TNS3Q68CZ2 1445 aa15.48■□□□□ 0.07
TRAPPC4-211ENST00000533012 SPATA31A6Q5VVP1 1343 aa15.47■□□□□ 0.07
TRAPPC4-211ENST00000533012 NUTM2GQ5VZR2 741 aa15.47■□□□□ 0.07
TRAPPC4-211ENST00000533012 SSH2Q76I76 1423 aa15.47■□□□□ 0.07
TRAPPC4-211ENST00000533012 PNPLA6Q8IY17 1366 aa15.47■□□□□ 0.07
TRAPPC4-211ENST00000533012 EDC4Q6P2E9 1401 aaKnown RBP15.46■□□□□ 0.07
TRAPPC4-211ENST00000533012 NUTM2BA6NNL0 878 aaPredicted RBP15.46■□□□□ 0.07
TRAPPC4-211ENST00000533012 NUTM2EB1AL46 878 aaPredicted RBP15.46■□□□□ 0.07
TRAPPC4-211ENST00000533012 PLEKHG5O94827 1062 aa15.46■□□□□ 0.07
TRAPPC4-211ENST00000533012 HAP1P54257 671 aaPredicted RBP15.46■□□□□ 0.07
TRAPPC4-211ENST00000533012 NLRP6P59044 892 aa15.46■□□□□ 0.07
TRAPPC4-211ENST00000533012 NUTM2AQ8IVF1 878 aaPredicted RBP15.46■□□□□ 0.07
TRAPPC4-211ENST00000533012 CARD14Q9BXL6 1004 aa15.46■□□□□ 0.07
TRAPPC4-211ENST00000533012 ZNF316A6NFI3 1004 aaPredicted RBP15.45■□□□□ 0.06
TRAPPC4-211ENST00000533012 NME9Q86XW9 330 aa15.44■□□□□ 0.06
TRAPPC4-211ENST00000533012 CABLES1Q8TDN4 633 aa15.44■□□□□ 0.06
TRAPPC4-211ENST00000533012 KNSTRNQ9Y448 316 aa15.43■□□□□ 0.06
TRAPPC4-211ENST00000533012 FYB1O15117 783 aa15.42■□□□□ 0.06
TRAPPC4-211ENST00000533012 CGNL1Q0VF96 1302 aa15.42■□□□□ 0.06
TRAPPC4-211ENST00000533012 TRPM3Q9HCF6 1732 aaPredicted RBP15.41■□□□□ 0.06
TRAPPC4-211ENST00000533012 ADAMTS2O95450 1211 aa15.41■□□□□ 0.06
TRAPPC4-211ENST00000533012 COG3Q96JB2 828 aa15.41■□□□□ 0.06
TRAPPC4-211ENST00000533012 ZRANB1Q9UGI0 708 aa15.41■□□□□ 0.06
TRAPPC4-211ENST00000533012 NSD3Q9BZ95 1437 aa15.41■□□□□ 0.06
TRAPPC4-211ENST00000533012 AKAP12Q02952 1782 aa15.4■□□□□ 0.06
TRAPPC4-211ENST00000533012 GCP02774 474 aa15.4■□□□□ 0.06
TRAPPC4-211ENST00000533012 MEX3CQ5U5Q3 659 aaKnown RBP15.4■□□□□ 0.06
TRAPPC4-211ENST00000533012 USP31Q70CQ4 1352 aa15.39■□□□□ 0.05
TRAPPC4-211ENST00000533012 PER1O15534 1290 aaPredicted RBP15.39■□□□□ 0.05
TRAPPC4-211ENST00000533012 DDX10Q13206 875 aaKnown RBP15.39■□□□□ 0.05
TRAPPC4-211ENST00000533012 KCNH5Q8NCM2 988 aa15.39■□□□□ 0.05
TRAPPC4-211ENST00000533012 GGNBP2Q9H3C7 697 aa15.39■□□□□ 0.05
TRAPPC4-211ENST00000533012 MYOM1P52179 1685 aa15.38■□□□□ 0.05
TRAPPC4-211ENST00000533012 USP19O94966 1318 aa15.38■□□□□ 0.05
TRAPPC4-211ENST00000533012 SHPRHQ149N8 1683 aa15.38■□□□□ 0.05
TRAPPC4-211ENST00000533012 MON2Q7Z3U7 1717 aa15.37■□□□□ 0.05
TRAPPC4-211ENST00000533012 ALS2Q96Q42 1657 aa15.37■□□□□ 0.05
TRAPPC4-211ENST00000533012 SOX12O15370 315 aa15.36■□□□□ 0.05
TRAPPC4-211ENST00000533012 ZC3H6P61129 1189 aaKnown RBP15.36■□□□□ 0.05
TRAPPC4-211ENST00000533012 COL22A1Q8NFW1 1626 aaPredicted RBP15.35■□□□□ 0.05
TRAPPC4-211ENST00000533012 NGLY1Q96IV0 654 aa15.35■□□□□ 0.05
TRAPPC4-211ENST00000533012 C8orf37Q96NL8 207 aa15.35■□□□□ 0.05
TRAPPC4-211ENST00000533012 NRKQ7Z2Y5 1582 aa15.35■□□□□ 0.05
TRAPPC4-211ENST00000533012 AMER1Q5JTC6 1135 aaPredicted RBP15.34■□□□□ 0.05
TRAPPC4-211ENST00000533012 MED1Q15648 1581 aaPredicted RBP15.33■□□□□ 0.05
TRAPPC4-211ENST00000533012 FAM83GA6ND36 823 aa15.33■□□□□ 0.04
TRAPPC4-211ENST00000533012 MORC1Q86VD1 984 aa15.33■□□□□ 0.04
TRAPPC4-211ENST00000533012 PRDM11Q9NQV5 511 aa15.33■□□□□ 0.04
TRAPPC4-211ENST00000533012 NSD2O96028 1365 aa15.33■□□□□ 0.04
TRAPPC4-211ENST00000533012 LRP6O75581 1613 aa15.32■□□□□ 0.04
TRAPPC4-211ENST00000533012 PIK3C2AO00443 1686 aa15.32■□□□□ 0.04
TRAPPC4-211ENST00000533012 ZBTB7CA1YPR0 619 aa15.32■□□□□ 0.04
TRAPPC4-211ENST00000533012 CC2D1BQ5T0F9 858 aaKnown RBP15.32■□□□□ 0.04
TRAPPC4-211ENST00000533012 OVOS2A0A0J9YW53 1432 aa15.32■□□□□ 0.04
TRAPPC4-211ENST00000533012 OVOS2Q6IE36 1432 aa15.32■□□□□ 0.04
TRAPPC4-211ENST00000533012 CNGB1Q14028 1251 aaPredicted RBP15.31■□□□□ 0.04
TRAPPC4-211ENST00000533012 ARHGEF25Q86VW2 580 aa15.31■□□□□ 0.04
TRAPPC4-211ENST00000533012 PHF23Q9BUL5 403 aaPredicted RBP15.31■□□□□ 0.04
TRAPPC4-211ENST00000533012 KIAA0232Q92628 1395 aa15.31■□□□□ 0.04
TRAPPC4-211ENST00000533012 CPDO75976 1380 aa15.3■□□□□ 0.04
TRAPPC4-211ENST00000533012 CHRNA2Q15822 529 aa15.3■□□□□ 0.04
TRAPPC4-211ENST00000533012 FNBP4Q8N3X1 1017 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC4-211ENST00000533012 SLIT3O75094 1523 aa15.29■□□□□ 0.04
TRAPPC4-211ENST00000533012 NPC1L1Q9UHC9 1359 aa15.29■□□□□ 0.04
TRAPPC4-211ENST00000533012 FBLN1P23142 703 aa15.29■□□□□ 0.04
TRAPPC4-211ENST00000533012 TNNT2P45379 298 aaPredicted RBP15.29■□□□□ 0.04
TRAPPC4-211ENST00000533012 AFF2P51816 1311 aa15.28■□□□□ 0.04
TRAPPC4-211ENST00000533012 ZNF772Q68DY9 489 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC4-211ENST00000533012 BTG4Q9NY30 223 aa15.28■□□□□ 0.04
TRAPPC4-211ENST00000533012 USP21Q9UK80 565 aa15.28■□□□□ 0.04
TRAPPC4-211ENST00000533012 AMPHP49418 695 aa15.27■□□□□ 0.04
TRAPPC4-211ENST00000533012 EVA1CP58658 441 aa15.27■□□□□ 0.04
TRAPPC4-211ENST00000533012 RRS1Q15050 365 aaKnown RBP15.27■□□□□ 0.04
TRAPPC4-211ENST00000533012 AATKQ6ZMQ8 1374 aa15.26■□□□□ 0.03
TRAPPC4-211ENST00000533012 UNC5CLQ8IV45 518 aa15.26■□□□□ 0.03
TRAPPC4-211ENST00000533012 MAP3K19Q56UN5 1328 aa15.25■□□□□ 0.03
TRAPPC4-211ENST00000533012 PPM1GO15355 546 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC4-211ENST00000533012 IP6K1Q92551 441 aa15.25■□□□□ 0.03
TRAPPC4-211ENST00000533012 PHRF1Q9P1Y6 1649 aaKnown RBP15.25■□□□□ 0.03
TRAPPC4-211ENST00000533012 QTRT2Q9H974 415 aaKnown RBP15.24■□□□□ 0.03
TRAPPC4-211ENST00000533012 POLKQ9UBT6 870 aa15.24■□□□□ 0.03
TRAPPC4-211ENST00000533012 AXIN2Q9Y2T1 843 aa15.24■□□□□ 0.03
TRAPPC4-211ENST00000533012 CRYBG1Q9Y4K1 1723 aa15.23■□□□□ 0.03
TRAPPC4-211ENST00000533012 NFAT5O94916 1531 aa15.23■□□□□ 0.03
TRAPPC4-211ENST00000533012 USP54Q70EL1 1684 aa15.23■□□□□ 0.03
TRAPPC4-211ENST00000533012 KIF20BQ96Q89 1820 aa15.23■□□□□ 0.03
TRAPPC4-211ENST00000533012 STRN4Q9NRL3 753 aa15.23■□□□□ 0.03
TRAPPC4-211ENST00000533012 RGS17Q9UGC6 210 aaPredicted RBP15.23■□□□□ 0.03
TRAPPC4-211ENST00000533012 TRPC5Q9UL62 973 aaPredicted RBP15.23■□□□□ 0.03
TRAPPC4-211ENST00000533012 ABCA3Q99758 1704 aa15.23■□□□□ 0.03
TRAPPC4-211ENST00000533012 SLIT2O94813 1529 aa15.22■□□□□ 0.03
TRAPPC4-211ENST00000533012 HOXC9P31274 260 aa15.22■□□□□ 0.03
TRAPPC4-211ENST00000533012 EMILIN1Q9Y6C2 1016 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms