RNA–Protein interactions for RNA: ENST00000532912.1

TRIM53BP-201, Transcript of tripartite motif containing 53B, pseudogene, humanhuman

BASIC

Gene TRIM53BP, Length 1,720 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53BP-201ENST00000532912 TERF2IPQ9NYB0 399 aa10.72□□□□□ -0.69
TRIM53BP-201ENST00000532912 ATP7BP35670 1465 aa10.71□□□□□ -0.69
TRIM53BP-201ENST00000532912 RIMS2Q9UQ26 1411 aa10.71□□□□□ -0.69
TRIM53BP-201ENST00000532912 MYH16Q9H6N6 1097 aa10.71□□□□□ -0.69
TRIM53BP-201ENST00000532912 TRIM35Q9UPQ4 493 aa10.71□□□□□ -0.69
TRIM53BP-201ENST00000532912 TNNQ9UQP3 1299 aa10.71□□□□□ -0.69
TRIM53BP-201ENST00000532912 CT47B1P0C2W7 299 aaPredicted RBP10.7□□□□□ -0.7
TRIM53BP-201ENST00000532912 NBR1Q14596 966 aa10.7□□□□□ -0.7
TRIM53BP-201ENST00000532912 POGKQ9P215 609 aa10.7□□□□□ -0.7
TRIM53BP-201ENST00000532912 TMPOP42166 694 aaKnown RBP10.7□□□□□ -0.7
TRIM53BP-201ENST00000532912 DDRGK1Q96HY6 314 aa10.7□□□□□ -0.7
TRIM53BP-201ENST00000532912 KNDC1Q76NI1 1749 aa10.69□□□□□ -0.7
TRIM53BP-201ENST00000532912 IL16Q14005 1332 aa10.69□□□□□ -0.7
TRIM53BP-201ENST00000532912 RGS3P49796 1198 aa10.69□□□□□ -0.7
TRIM53BP-201ENST00000532912 CABP1Q9NZU7 370 aa10.69□□□□□ -0.7
TRIM53BP-201ENST00000532912 CPSF1Q10570 1443 aaKnown RBP10.69□□□□□ -0.7
TRIM53BP-201ENST00000532912 CANXP27824 592 aaKnown RBP10.68□□□□□ -0.7
TRIM53BP-201ENST00000532912 HDGFL2Q7Z4V5 671 aaPredicted RBP10.68□□□□□ -0.7
TRIM53BP-201ENST00000532912 FRAT1Q92837 279 aaPredicted RBP10.68□□□□□ -0.7
TRIM53BP-201ENST00000532912 PCDHB15Q9Y5E8 787 aa10.68□□□□□ -0.7
TRIM53BP-201ENST00000532912 LRRC7Q96NW7 1537 aa10.68□□□□□ -0.7
TRIM53BP-201ENST00000532912 ZMYM3Q14202 1370 aa10.68□□□□□ -0.7
TRIM53BP-201ENST00000532912 USP19O94966 1318 aa10.68□□□□□ -0.7
TRIM53BP-201ENST00000532912 TECPR2O15040 1411 aa10.67□□□□□ -0.7
TRIM53BP-201ENST00000532912 DEKP35659 375 aaKnown RBP10.67□□□□□ -0.7
TRIM53BP-201ENST00000532912 MAPK8IP3Q9UPT6 1336 aa10.67□□□□□ -0.7
TRIM53BP-201ENST00000532912 FAM135BQ49AJ0 1406 aa10.67□□□□□ -0.7
TRIM53BP-201ENST00000532912 WAPLQ7Z5K2 1190 aa10.67□□□□□ -0.7
TRIM53BP-201ENST00000532912 BCL2L13Q9BXK5 485 aa10.67□□□□□ -0.7
TRIM53BP-201ENST00000532912 KIF13AQ9H1H9 1805 aa10.66□□□□□ -0.7
TRIM53BP-201ENST00000532912 U2SURPO15042 1029 aaKnown RBP10.66□□□□□ -0.7
TRIM53BP-201ENST00000532912 DIAPH1O60610 1272 aaKnown RBP10.66□□□□□ -0.7
TRIM53BP-201ENST00000532912 PMFBP1Q8TBY8 1022 aa10.66□□□□□ -0.7
TRIM53BP-201ENST00000532912 TSR2Q969E8 191 aaKnown RBP10.66□□□□□ -0.7
TRIM53BP-201ENST00000532912 STAG3Q9UJ98 1225 aa10.66□□□□□ -0.7
TRIM53BP-201ENST00000532912 METP08581 1390 aa10.66□□□□□ -0.7
TRIM53BP-201ENST00000532912 CPS1P31327 1500 aa10.65□□□□□ -0.7
TRIM53BP-201ENST00000532912 MON2Q7Z3U7 1717 aa10.65□□□□□ -0.7
TRIM53BP-201ENST00000532912 EXOSC9Q06265 439 aaKnown RBP10.65□□□□□ -0.7
TRIM53BP-201ENST00000532912 MVPQ14764 893 aaKnown RBP10.65□□□□□ -0.7
TRIM53BP-201ENST00000532912 POLKQ9UBT6 870 aa10.65□□□□□ -0.7
TRIM53BP-201ENST00000532912 EDC4Q6P2E9 1401 aaKnown RBP10.65□□□□□ -0.7
TRIM53BP-201ENST00000532912 ZKSCAN2Q63HK3 967 aa10.64□□□□□ -0.71
TRIM53BP-201ENST00000532912 RSPH6AQ9H0K4 717 aa10.64□□□□□ -0.71
TRIM53BP-201ENST00000532912 MAP2P11137 1827 aaKnown RBP10.64□□□□□ -0.71
TRIM53BP-201ENST00000532912 PPIP5K1Q6PFW1 1433 aa10.64□□□□□ -0.71
TRIM53BP-201ENST00000532912 FCHSD2O94868 740 aa10.64□□□□□ -0.71
TRIM53BP-201ENST00000532912 SIRT1Q96EB6 747 aa10.64□□□□□ -0.71
TRIM53BP-201ENST00000532912 USP35Q9P2H5 1018 aa10.64□□□□□ -0.71
TRIM53BP-201ENST00000532912 LAS1LQ9Y4W2 734 aaKnown RBP10.64□□□□□ -0.71
TRIM53BP-201ENST00000532912 AKAP12Q02952 1782 aa10.63□□□□□ -0.71
TRIM53BP-201ENST00000532912 CDK12Q9NYV4 1490 aaPredicted RBP10.63□□□□□ -0.71
TRIM53BP-201ENST00000532912 AATKQ6ZMQ8 1374 aa10.63□□□□□ -0.71
TRIM53BP-201ENST00000532912 WASLO00401 505 aaPredicted RBP10.63□□□□□ -0.71
TRIM53BP-201ENST00000532912 PPM1GO15355 546 aaPredicted RBP10.63□□□□□ -0.71
TRIM53BP-201ENST00000532912 RIPK4P57078 832 aa10.63□□□□□ -0.71
TRIM53BP-201ENST00000532912 DZIP1LQ8IYY4 767 aaKnown RBP10.63□□□□□ -0.71
TRIM53BP-201ENST00000532912 SSH1Q8WYL5 1049 aa10.63□□□□□ -0.71
TRIM53BP-201ENST00000532912 BCL11AQ9H165 835 aa10.63□□□□□ -0.71
TRIM53BP-201ENST00000532912 C3P01024 1663 aa10.63□□□□□ -0.71
TRIM53BP-201ENST00000532912 TRIM27P14373 513 aa10.62□□□□□ -0.71
TRIM53BP-201ENST00000532912 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.62□□□□□ -0.71
TRIM53BP-201ENST00000532912 PNNQ9H307 717 aaKnown RBP10.62□□□□□ -0.71
TRIM53BP-201ENST00000532912 PDZRN3Q9UPQ7 1066 aa10.62□□□□□ -0.71
TRIM53BP-201ENST00000532912 UBR1Q8IWV7 1749 aa10.62□□□□□ -0.71
TRIM53BP-201ENST00000532912 SEC24BO95487 1268 aa10.61□□□□□ -0.71
TRIM53BP-201ENST00000532912 FBLN1P23142 703 aa10.61□□□□□ -0.71
TRIM53BP-201ENST00000532912 RTL5Q5HYW3 569 aaPredicted RBP10.61□□□□□ -0.71
TRIM53BP-201ENST00000532912 POTEHQ6S545 545 aa10.61□□□□□ -0.71
TRIM53BP-201ENST00000532912 IL13P35225 146 aa10.61□□□□□ -0.71
TRIM53BP-201ENST00000532912 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.61□□□□□ -0.71
TRIM53BP-201ENST00000532912 SMC4Q9NTJ3 1288 aa10.61□□□□□ -0.71
TRIM53BP-201ENST00000532912 PRKAR2BP31323 418 aa10.6□□□□□ -0.71
TRIM53BP-201ENST00000532912 SLC4A3P48751 1232 aa10.6□□□□□ -0.71
TRIM53BP-201ENST00000532912 BRPF1P55201 1214 aaPredicted RBP10.6□□□□□ -0.71
TRIM53BP-201ENST00000532912 HDAC1Q13547 482 aaPredicted RBP10.6□□□□□ -0.71
TRIM53BP-201ENST00000532912 MLECQ14165 292 aa10.6□□□□□ -0.71
TRIM53BP-201ENST00000532912 ATF7IPQ6VMQ6 1270 aa10.6□□□□□ -0.71
TRIM53BP-201ENST00000532912 RWDD1Q9H446 243 aaPredicted RBP10.6□□□□□ -0.71
TRIM53BP-201ENST00000532912 NRKQ7Z2Y5 1582 aa10.6□□□□□ -0.71
TRIM53BP-201ENST00000532912 ADAMTS13Q76LX8 1427 aa10.59□□□□□ -0.71
TRIM53BP-201ENST00000532912 TOPAZ1Q8N9V7 1692 aa10.59□□□□□ -0.71
TRIM53BP-201ENST00000532912 NEFMP07197 916 aa10.59□□□□□ -0.71
TRIM53BP-201ENST00000532912 ALDH1L2Q3SY69 923 aa10.59□□□□□ -0.71
TRIM53BP-201ENST00000532912 EMILIN1Q9Y6C2 1016 aa10.59□□□□□ -0.71
TRIM53BP-201ENST00000532912 TNRQ92752 1358 aa10.59□□□□□ -0.71
TRIM53BP-201ENST00000532912 TMEM2Q9UHN6 1383 aa10.59□□□□□ -0.71
TRIM53BP-201ENST00000532912 ITSN1Q15811 1721 aa10.59□□□□□ -0.71
TRIM53BP-201ENST00000532912 NFE2L2Q16236 605 aa10.58□□□□□ -0.72
TRIM53BP-201ENST00000532912 TXNDC2Q86VQ3 553 aa10.58□□□□□ -0.72
TRIM53BP-201ENST00000532912 NME9Q86XW9 330 aa10.58□□□□□ -0.72
TRIM53BP-201ENST00000532912 FTSJ3Q8IY81 847 aaKnown RBP10.58□□□□□ -0.72
TRIM53BP-201ENST00000532912 NUDT16Q96DE0 195 aaKnown RBP10.58□□□□□ -0.72
TRIM53BP-201ENST00000532912 PHACTR3Q96KR7 559 aa10.58□□□□□ -0.72
TRIM53BP-201ENST00000532912 NOB1Q9ULX3 412 aaKnown RBP10.58□□□□□ -0.72
TRIM53BP-201ENST00000532912 DDX19BQ9UMR2 479 aa10.58□□□□□ -0.72
TRIM53BP-201ENST00000532912 PRR36Q9H6K5 1346 aa10.58□□□□□ -0.72
TRIM53BP-201ENST00000532912 ZNF853P0CG23 659 aa10.58□□□□□ -0.72
TRIM53BP-201ENST00000532912 ZRANB1Q9UGI0 708 aa10.58□□□□□ -0.72
TRIM53BP-201ENST00000532912 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms