RNA–Protein interactions for RNA: ENST00000532781.1

ARID1A-208, Transcript of AT-rich interaction domain 1A, humanhuman

TSL 1 (best)

Gene ARID1A, Length 2,583 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1A-208ENST00000532781 MED14O60244 1454 aa18.43■□□□□ 0.54
ARID1A-208ENST00000532781 ARHGAP23Q9P227 1491 aa18.43■□□□□ 0.54
ARID1A-208ENST00000532781 PMFBP1Q8TBY8 1022 aa18.42■□□□□ 0.54
ARID1A-208ENST00000532781 RUNDC1Q96C34 613 aa18.42■□□□□ 0.54
ARID1A-208ENST00000532781 CCDC61Q9Y6R9 512 aa18.42■□□□□ 0.54
ARID1A-208ENST00000532781 SOX12O15370 315 aa18.42■□□□□ 0.54
ARID1A-208ENST00000532781 RRS1Q15050 365 aaKnown RBP18.41■□□□□ 0.54
ARID1A-208ENST00000532781 ERICH6BQ5W0A0 696 aa18.41■□□□□ 0.54
ARID1A-208ENST00000532781 DNAJC5Q9H3Z4 198 aa18.41■□□□□ 0.54
ARID1A-208ENST00000532781 CPSF1Q10570 1443 aaKnown RBP18.41■□□□□ 0.54
ARID1A-208ENST00000532781 COL3A1P02461 1466 aaPredicted RBP18.41■□□□□ 0.54
ARID1A-208ENST00000532781 CEP170BQ9Y4F5 1589 aaPredicted RBP18.41■□□□□ 0.54
ARID1A-208ENST00000532781 NKTRP30414 1462 aaKnown RBP18.4■□□□□ 0.54
ARID1A-208ENST00000532781 POLKQ9UBT6 870 aa18.4■□□□□ 0.54
ARID1A-208ENST00000532781 IQSEC2Q5JU85 1478 aa18.4■□□□□ 0.54
ARID1A-208ENST00000532781 BCAR3O75815 825 aa18.39■□□□□ 0.54
ARID1A-208ENST00000532781 KCNA6P17658 529 aa18.39■□□□□ 0.54
ARID1A-208ENST00000532781 CRBNQ96SW2 442 aa18.39■□□□□ 0.54
ARID1A-208ENST00000532781 ITSN1Q15811 1721 aa18.39■□□□□ 0.54
ARID1A-208ENST00000532781 CDC42BPGQ6DT37 1551 aa18.39■□□□□ 0.53
ARID1A-208ENST00000532781 ACEP12821 1306 aa18.38■□□□□ 0.53
ARID1A-208ENST00000532781 MON2Q7Z3U7 1717 aa18.38■□□□□ 0.53
ARID1A-208ENST00000532781 AKAP12Q02952 1782 aa18.37■□□□□ 0.53
ARID1A-208ENST00000532781 HMOX1P09601 288 aa18.37■□□□□ 0.53
ARID1A-208ENST00000532781 SKAP1Q86WV1 359 aa18.37■□□□□ 0.53
ARID1A-208ENST00000532781 TRMT2AQ8IZ69 625 aaKnown RBP18.37■□□□□ 0.53
ARID1A-208ENST00000532781 EDC4Q6P2E9 1401 aaKnown RBP18.36■□□□□ 0.53
ARID1A-208ENST00000532781 TBX22Q9Y458 520 aa18.36■□□□□ 0.53
ARID1A-208ENST00000532781 DIAPH1O60610 1272 aaKnown RBP18.35■□□□□ 0.53
ARID1A-208ENST00000532781 SIRT1Q96EB6 747 aa18.35■□□□□ 0.53
ARID1A-208ENST00000532781 PLEKHF1Q96S99 279 aa18.34■□□□□ 0.53
ARID1A-208ENST00000532781 E9PSI1 815 aa18.34■□□□□ 0.53
ARID1A-208ENST00000532781 BCL2L13Q9BXK5 485 aa18.34■□□□□ 0.53
ARID1A-208ENST00000532781 TSR2Q969E8 191 aaKnown RBP18.33■□□□□ 0.52
ARID1A-208ENST00000532781 ADAMTSL3P82987 1691 aa18.33■□□□□ 0.52
ARID1A-208ENST00000532781 TOPAZ1Q8N9V7 1692 aa18.32■□□□□ 0.52
ARID1A-208ENST00000532781 COG3Q96JB2 828 aa18.32■□□□□ 0.52
ARID1A-208ENST00000532781 RBM19Q9Y4C8 960 aaKnown RBP18.32■□□□□ 0.52
ARID1A-208ENST00000532781 ADGRB2O60241 1585 aa18.31■□□□□ 0.52
ARID1A-208ENST00000532781 NUTM2GQ5VZR2 741 aa18.31■□□□□ 0.52
ARID1A-208ENST00000532781 DIP2AQ14689 1571 aa18.3■□□□□ 0.52
ARID1A-208ENST00000532781 TTC21BQ7Z4L5 1316 aa18.3■□□□□ 0.52
ARID1A-208ENST00000532781 LRRC7Q96NW7 1537 aa18.3■□□□□ 0.52
ARID1A-208ENST00000532781 PNPLA6Q8IY17 1366 aa18.3■□□□□ 0.52
ARID1A-208ENST00000532781 PHACTR3Q96KR7 559 aa18.3■□□□□ 0.52
ARID1A-208ENST00000532781 XRN1Q8IZH2 1706 aaKnown RBP18.29■□□□□ 0.52
ARID1A-208ENST00000532781 PRKAR2BP31323 418 aa18.29■□□□□ 0.52
ARID1A-208ENST00000532781 TMPOP42166 694 aaKnown RBP18.29■□□□□ 0.52
ARID1A-208ENST00000532781 PHF23Q9BUL5 403 aaPredicted RBP18.29■□□□□ 0.52
ARID1A-208ENST00000532781 TNNQ9UQP3 1299 aa18.29■□□□□ 0.52
ARID1A-208ENST00000532781 TRIM35Q9UPQ4 493 aa18.29■□□□□ 0.52
ARID1A-208ENST00000532781 MAPK8IP3Q9UPT6 1336 aa18.28■□□□□ 0.52
ARID1A-208ENST00000532781 NRKQ7Z2Y5 1582 aa18.28■□□□□ 0.52
ARID1A-208ENST00000532781 THUMPD2Q9BTF0 503 aaKnown RBP18.28■□□□□ 0.52
ARID1A-208ENST00000532781 PLEKHG5O94827 1062 aa18.27■□□□□ 0.52
ARID1A-208ENST00000532781 ANKLE2Q86XL3 938 aa18.27■□□□□ 0.52
ARID1A-208ENST00000532781 USP6P35125 1406 aa18.27■□□□□ 0.51
ARID1A-208ENST00000532781 RIPK4P57078 832 aa18.27■□□□□ 0.51
ARID1A-208ENST00000532781 NGDNQ8NEJ9 315 aaKnown RBP18.27■□□□□ 0.51
ARID1A-208ENST00000532781 PTCH1Q13635 1447 aa18.26■□□□□ 0.51
ARID1A-208ENST00000532781 FRAT1Q92837 279 aaPredicted RBP18.26■□□□□ 0.51
ARID1A-208ENST00000532781 RSPH6AQ9H0K4 717 aa18.25■□□□□ 0.51
ARID1A-208ENST00000532781 PLEKHG3A1L390 1219 aa18.25■□□□□ 0.51
ARID1A-208ENST00000532781 ZNF692Q9BU19 519 aaPredicted RBP18.25■□□□□ 0.51
ARID1A-208ENST00000532781 IL13P35225 146 aa18.24■□□□□ 0.51
ARID1A-208ENST00000532781 AEBP1Q8IUX7 1158 aa18.24■□□□□ 0.51
ARID1A-208ENST00000532781 NALCNQ8IZF0 1738 aa18.23■□□□□ 0.51
ARID1A-208ENST00000532781 PANK1Q8TE04 598 aa18.23■□□□□ 0.51
ARID1A-208ENST00000532781 SETD1BQ9UPS6 1966 aaKnown RBP18.23■□□□□ 0.51
ARID1A-208ENST00000532781 ZNF142P52746 1687 aaPredicted RBP18.23■□□□□ 0.51
ARID1A-208ENST00000532781 CHD2O14647 1828 aaKnown RBP18.23■□□□□ 0.51
ARID1A-208ENST00000532781 HSP90AB2PQ58FF8 381 aa18.23■□□□□ 0.51
ARID1A-208ENST00000532781 LAS1LQ9Y4W2 734 aaKnown RBP18.22■□□□□ 0.51
ARID1A-208ENST00000532781 PEAK1Q9H792 1746 aa18.22■□□□□ 0.51
ARID1A-208ENST00000532781 FANCIQ9NVI1 1328 aa18.22■□□□□ 0.51
ARID1A-208ENST00000532781 WDR63Q8IWG1 891 aa18.21■□□□□ 0.51
ARID1A-208ENST00000532781 OVOS2A0A0J9YW53 1432 aa18.2■□□□□ 0.5
ARID1A-208ENST00000532781 OVOS2Q6IE36 1432 aa18.2■□□□□ 0.5
ARID1A-208ENST00000532781 PAK3O75914 559 aaPredicted RBP18.2■□□□□ 0.5
ARID1A-208ENST00000532781 CCDC27Q2M243 656 aa18.2■□□□□ 0.5
ARID1A-208ENST00000532781 CDK12Q9NYV4 1490 aaPredicted RBP18.2■□□□□ 0.5
ARID1A-208ENST00000532781 FAM83GA6ND36 823 aa18.2■□□□□ 0.5
ARID1A-208ENST00000532781 CANXP27824 592 aaKnown RBP18.2■□□□□ 0.5
ARID1A-208ENST00000532781 RARSP54136 660 aaKnown RBP18.2■□□□□ 0.5
ARID1A-208ENST00000532781 EXOSC9Q06265 439 aaKnown RBP18.2■□□□□ 0.5
ARID1A-208ENST00000532781 CLUAP1Q96AJ1 413 aa18.2■□□□□ 0.5
ARID1A-208ENST00000532781 C14orf37Q86TY3 774 aa18.19■□□□□ 0.5
ARID1A-208ENST00000532781 DCTN1Q14203 1278 aa18.19■□□□□ 0.5
ARID1A-208ENST00000532781 EIF4A2Q14240 407 aaKnown RBP18.19■□□□□ 0.5
ARID1A-208ENST00000532781 NGEFQ8N5V2 710 aa18.19■□□□□ 0.5
ARID1A-208ENST00000532781 COG6Q9Y2V7 657 aa18.19■□□□□ 0.5
ARID1A-208ENST00000532781 DLG5Q8TDM6 1919 aa18.19■□□□□ 0.5
ARID1A-208ENST00000532781 FCHSD2O94868 740 aa18.18■□□□□ 0.5
ARID1A-208ENST00000532781 PIK3C2AO00443 1686 aa18.18■□□□□ 0.5
ARID1A-208ENST00000532781 SSH2Q76I76 1423 aa18.18■□□□□ 0.5
ARID1A-208ENST00000532781 AATKQ6ZMQ8 1374 aa18.18■□□□□ 0.5
ARID1A-208ENST00000532781 XPCQ01831 940 aaPredicted RBP18.18■□□□□ 0.5
ARID1A-208ENST00000532781 FMN2Q9NZ56 1722 aa18.17■□□□□ 0.5
ARID1A-208ENST00000532781 RLBP1P12271 317 aa18.17■□□□□ 0.5
ARID1A-208ENST00000532781 SULT6B1Q6IMI4 303 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms