RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-223ENST00000532370 QTRT2Q9H974 415 aaKnown RBP24.59■■□□□ 1.53
CTSB-223ENST00000532370 USP21Q9UK80 565 aa24.59■■□□□ 1.53
CTSB-223ENST00000532370 USP47Q96K76 1375 aa24.57■■□□□ 1.52
CTSB-223ENST00000532370 ITSN1Q15811 1721 aa24.57■■□□□ 1.52
CTSB-223ENST00000532370 ATAD2Q6PL18 1390 aa24.56■■□□□ 1.52
CTSB-223ENST00000532370 RXRBP28702 533 aa24.55■■□□□ 1.52
CTSB-223ENST00000532370 ABTB2Q8N961 1025 aa24.55■■□□□ 1.52
CTSB-223ENST00000532370 FAM83GA6ND36 823 aa24.54■■□□□ 1.52
CTSB-223ENST00000532370 BCL9LQ86UU0 1499 aa24.52■■□□□ 1.52
CTSB-223ENST00000532370 TMC1Q8TDI8 760 aa24.52■■□□□ 1.52
CTSB-223ENST00000532370 ALS2Q96Q42 1657 aa24.52■■□□□ 1.52
CTSB-223ENST00000532370 USP6P35125 1406 aa24.52■■□□□ 1.52
CTSB-223ENST00000532370 SLC12A5Q9H2X9 1139 aa24.51■■□□□ 1.51
CTSB-223ENST00000532370 TRPC5Q9UL62 973 aaPredicted RBP24.5■■□□□ 1.51
CTSB-223ENST00000532370 RBM6P78332 1123 aaKnown RBP24.49■■□□□ 1.51
CTSB-223ENST00000532370 ZNF692Q9BU19 519 aaPredicted RBP24.49■■□□□ 1.51
CTSB-223ENST00000532370 SSH2Q76I76 1423 aa24.49■■□□□ 1.51
CTSB-223ENST00000532370 SLIT2O94813 1529 aa24.48■■□□□ 1.51
CTSB-223ENST00000532370 UNC5CLQ8IV45 518 aa24.48■■□□□ 1.51
CTSB-223ENST00000532370 CPSF1Q10570 1443 aaKnown RBP24.47■■□□□ 1.51
CTSB-223ENST00000532370 PUS7Q96PZ0 661 aaKnown RBP24.47■■□□□ 1.51
CTSB-223ENST00000532370 ATRNO75882 1429 aa24.46■■□□□ 1.51
CTSB-223ENST00000532370 BRD4O60885 1362 aaPredicted RBP24.46■■□□□ 1.51
CTSB-223ENST00000532370 TTC21BQ7Z4L5 1316 aa24.46■■□□□ 1.51
CTSB-223ENST00000532370 NLRP6P59044 892 aa24.45■■□□□ 1.5
CTSB-223ENST00000532370 ZC3H6P61129 1189 aaKnown RBP24.45■■□□□ 1.5
CTSB-223ENST00000532370 NLRP13Q86W25 1043 aa24.45■■□□□ 1.5
CTSB-223ENST00000532370 KTN1Q86UP2 1357 aaKnown RBP24.44■■□□□ 1.5
CTSB-223ENST00000532370 USP19O94966 1318 aa24.44■■□□□ 1.5
CTSB-223ENST00000532370 SLC24A1O60721 1099 aa24.44■■□□□ 1.5
CTSB-223ENST00000532370 TMF1P82094 1093 aa24.44■■□□□ 1.5
CTSB-223ENST00000532370 PRDM11Q9NQV5 511 aa24.44■■□□□ 1.5
CTSB-223ENST00000532370 KIAA0232Q92628 1395 aa24.43■■□□□ 1.5
CTSB-223ENST00000532370 CHRNA2Q15822 529 aa24.43■■□□□ 1.5
CTSB-223ENST00000532370 BTG4Q9NY30 223 aa24.43■■□□□ 1.5
CTSB-223ENST00000532370 CD163L1Q9NR16 1453 aa24.43■■□□□ 1.5
CTSB-223ENST00000532370 ABCA3Q99758 1704 aa24.42■■□□□ 1.5
CTSB-223ENST00000532370 GCP02774 474 aa24.42■■□□□ 1.5
CTSB-223ENST00000532370 GJD4Q96KN9 370 aaPredicted RBP24.42■■□□□ 1.5
CTSB-223ENST00000532370 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.41■■□□□ 1.5
CTSB-223ENST00000532370 HDGFL2Q7Z4V5 671 aaPredicted RBP24.4■■□□□ 1.5
CTSB-223ENST00000532370 MARF1Q9Y4F3 1742 aaKnown RBP24.39■■□□□ 1.5
CTSB-223ENST00000532370 RGS12O14924 1447 aa24.39■■□□□ 1.5
CTSB-223ENST00000532370 TERF2IPQ9NYB0 399 aa24.39■■□□□ 1.49
CTSB-223ENST00000532370 ZRANB1Q9UGI0 708 aa24.39■■□□□ 1.49
CTSB-223ENST00000532370 VPS72Q15906 364 aa24.38■■□□□ 1.49
CTSB-223ENST00000532370 A0A1W2PP64 1363 aa24.38■■□□□ 1.49
CTSB-223ENST00000532370 TTC21AQ8NDW8 1320 aa24.37■■□□□ 1.49
CTSB-223ENST00000532370 HSPA5P11021 654 aaKnown RBP24.37■■□□□ 1.49
CTSB-223ENST00000532370 CDK12Q9NYV4 1490 aaPredicted RBP24.37■■□□□ 1.49
CTSB-223ENST00000532370 CRYBG1Q9Y4K1 1723 aa24.36■■□□□ 1.49
CTSB-223ENST00000532370 EIF4G2P78344 907 aaKnown RBP eCLIP24.36■■□□□ 1.49
CTSB-223ENST00000532370 NME9Q86XW9 330 aa24.36■■□□□ 1.49
CTSB-223ENST00000532370 CCDC9Q9Y3X0 531 aaKnown RBP24.36■■□□□ 1.49
CTSB-223ENST00000532370 SOX12O15370 315 aa24.34■■□□□ 1.49
CTSB-223ENST00000532370 CPDO75976 1380 aa24.33■■□□□ 1.49
CTSB-223ENST00000532370 NINLQ9Y2I6 1382 aa24.33■■□□□ 1.49
CTSB-223ENST00000532370 ZBTB7CA1YPR0 619 aa24.33■■□□□ 1.49
CTSB-223ENST00000532370 CDCA8Q53HL2 280 aa24.33■■□□□ 1.49
CTSB-223ENST00000532370 PHRF1Q9P1Y6 1649 aaKnown RBP24.32■■□□□ 1.48
CTSB-223ENST00000532370 PIK3C2AO00443 1686 aa24.32■■□□□ 1.48
CTSB-223ENST00000532370 NRKQ7Z2Y5 1582 aa24.32■■□□□ 1.48
CTSB-223ENST00000532370 EDC4Q6P2E9 1401 aaKnown RBP24.31■■□□□ 1.48
CTSB-223ENST00000532370 STRN4Q9NRL3 753 aa24.31■■□□□ 1.48
CTSB-223ENST00000532370 AKAP12Q02952 1782 aa24.31■■□□□ 1.48
CTSB-223ENST00000532370 PLCH1Q4KWH8 1693 aa24.3■■□□□ 1.48
CTSB-223ENST00000532370 COL14A1Q05707 1796 aaKnown RBP24.29■■□□□ 1.48
CTSB-223ENST00000532370 SLIT3O75094 1523 aa24.29■■□□□ 1.48
CTSB-223ENST00000532370 GLI3P10071 1580 aa24.28■■□□□ 1.48
CTSB-223ENST00000532370 USP31Q70CQ4 1352 aa24.28■■□□□ 1.48
CTSB-223ENST00000532370 ANKRD36BQ8N2N9 1353 aa24.28■■□□□ 1.48
CTSB-223ENST00000532370 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.27■■□□□ 1.48
CTSB-223ENST00000532370 KCNH5Q8NCM2 988 aa24.27■■□□□ 1.48
CTSB-223ENST00000532370 POLR3GLQ9BT43 218 aa24.27■■□□□ 1.48
CTSB-223ENST00000532370 SPATA31A5Q5VU36 1347 aa24.27■■□□□ 1.48
CTSB-223ENST00000532370 SPATA31A7Q8IWB4 1347 aa24.27■■□□□ 1.48
CTSB-223ENST00000532370 EVA1CP58658 441 aa24.26■■□□□ 1.47
CTSB-223ENST00000532370 ARHGEF25Q86VW2 580 aa24.26■■□□□ 1.47
CTSB-223ENST00000532370 SEPT12Q8IYM1 358 aa24.26■■□□□ 1.47
CTSB-223ENST00000532370 NWD2Q9ULI1 1742 aa24.26■■□□□ 1.47
CTSB-223ENST00000532370 CAMTA1Q9Y6Y1 1673 aa24.25■■□□□ 1.47
CTSB-223ENST00000532370 MON2Q7Z3U7 1717 aa24.25■■□□□ 1.47
CTSB-223ENST00000532370 FAM98CQ17RN3 349 aaKnown RBP24.25■■□□□ 1.47
CTSB-223ENST00000532370 ONECUT3O60422 494 aaPredicted RBP24.24■■□□□ 1.47
CTSB-223ENST00000532370 LARP1Q6PKG0 1096 aaKnown RBP24.24■■□□□ 1.47
CTSB-223ENST00000532370 AXIN2Q9Y2T1 843 aa24.24■■□□□ 1.47
CTSB-223ENST00000532370 C11orf95C9JLR9 678 aaPredicted RBP24.23■■□□□ 1.47
CTSB-223ENST00000532370 UPF1Q92900 1129 aaKnown RBP eCLIP24.23■■□□□ 1.47
CTSB-223ENST00000532370 CARD14Q9BXL6 1004 aa24.23■■□□□ 1.47
CTSB-223ENST00000532370 AATKQ6ZMQ8 1374 aa24.23■■□□□ 1.47
CTSB-223ENST00000532370 NRAPQ86VF7 1730 aa24.23■■□□□ 1.47
CTSB-223ENST00000532370 SPATA31A1Q5TZJ5 1347 aa24.22■■□□□ 1.47
CTSB-223ENST00000532370 USP35Q9P2H5 1018 aa24.22■■□□□ 1.47
CTSB-223ENST00000532370 A0A0G2JS52 829 aa24.2■■□□□ 1.46
CTSB-223ENST00000532370 MYT1Q01538 1121 aa24.2■■□□□ 1.46
CTSB-223ENST00000532370 EP400Q96L91 3159 aa24.19■■□□□ 1.46
CTSB-223ENST00000532370 FYB1O15117 783 aa24.19■■□□□ 1.46
CTSB-223ENST00000532370 NFAT5O94916 1531 aa24.19■■□□□ 1.46
CTSB-223ENST00000532370 OVOS2A0A0J9YW53 1432 aa24.18■■□□□ 1.46
CTSB-223ENST00000532370 OVOS2Q6IE36 1432 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms