RNA–Protein interactions for RNA: ENST00000532032.5

ATXN3-215, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,191 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-215ENST00000532032 HRCP23327 699 aa10.65□□□□□ -0.7
ATXN3-215ENST00000532032 VARSP26640 1264 aaKnown RBP10.65□□□□□ -0.7
ATXN3-215ENST00000532032 TLL2Q9Y6L7 1015 aa10.65□□□□□ -0.7
ATXN3-215ENST00000532032 CAPN5O15484 640 aaPredicted RBP10.64□□□□□ -0.71
ATXN3-215ENST00000532032 CTHP32929 405 aa10.64□□□□□ -0.71
ATXN3-215ENST00000532032 PRPF38BQ5VTL8 546 aaKnown RBP10.64□□□□□ -0.71
ATXN3-215ENST00000532032 RIC3Q7Z5B4 369 aa10.64□□□□□ -0.71
ATXN3-215ENST00000532032 PLEKHG3A1L390 1219 aa10.63□□□□□ -0.71
ATXN3-215ENST00000532032 TERTO14746 1132 aaKnown RBP10.63□□□□□ -0.71
ATXN3-215ENST00000532032 MPNDQ8N594 471 aa10.63□□□□□ -0.71
ATXN3-215ENST00000532032 BMP1P13497 986 aa10.62□□□□□ -0.71
ATXN3-215ENST00000532032 TRIM46Q7Z4K8 759 aa10.62□□□□□ -0.71
ATXN3-215ENST00000532032 WIPF1O43516 503 aa10.61□□□□□ -0.71
ATXN3-215ENST00000532032 F12P00748 615 aaPredicted RBP10.61□□□□□ -0.71
ATXN3-215ENST00000532032 CABLES1Q8TDN4 633 aa10.61□□□□□ -0.71
ATXN3-215ENST00000532032 PDE4DQ08499 809 aa10.6□□□□□ -0.71
ATXN3-215ENST00000532032 CSPP1Q1MSJ5 1256 aa10.59□□□□□ -0.71
ATXN3-215ENST00000532032 MAP10Q9P2G4 905 aa10.59□□□□□ -0.71
ATXN3-215ENST00000532032 RB1CC1Q8TDY2 1594 aa10.59□□□□□ -0.71
ATXN3-215ENST00000532032 NNTQ13423 1086 aa10.58□□□□□ -0.72
ATXN3-215ENST00000532032 LCE2CQ5TA81 110 aa10.58□□□□□ -0.72
ATXN3-215ENST00000532032 MYSM1Q5VVJ2 828 aa10.58□□□□□ -0.72
ATXN3-215ENST00000532032 FAM174AQ8TBP5 190 aa10.58□□□□□ -0.72
ATXN3-215ENST00000532032 TUSC1Q2TAM9 212 aa10.57□□□□□ -0.72
ATXN3-215ENST00000532032 LIMD1Q9UGP4 676 aa10.57□□□□□ -0.72
ATXN3-215ENST00000532032 FOXJ1Q92949 421 aa10.56□□□□□ -0.72
ATXN3-215ENST00000532032 QPCTQ16769 361 aa10.55□□□□□ -0.72
ATXN3-215ENST00000532032 PER1O15534 1290 aaPredicted RBP10.54□□□□□ -0.72
ATXN3-215ENST00000532032 ADH1CP00326 375 aa10.54□□□□□ -0.72
ATXN3-215ENST00000532032 INSM1Q01101 510 aaPredicted RBP10.54□□□□□ -0.72
ATXN3-215ENST00000532032 CDK15Q96Q40 435 aa10.54□□□□□ -0.72
ATXN3-215ENST00000532032 SLC24A3Q9HC58 644 aa10.54□□□□□ -0.72
ATXN3-215ENST00000532032 NXF1Q9UBU9 619 aaKnown RBP10.54□□□□□ -0.72
ATXN3-215ENST00000532032 NUTM2BA6NNL0 878 aaPredicted RBP10.53□□□□□ -0.72
ATXN3-215ENST00000532032 NUTM2EB1AL46 878 aaPredicted RBP10.53□□□□□ -0.72
ATXN3-215ENST00000532032 LILRB3O75022 631 aa10.53□□□□□ -0.72
ATXN3-215ENST00000532032 TIMP2P16035 220 aa10.53□□□□□ -0.72
ATXN3-215ENST00000532032 NUTM2DQ5VT03 806 aaPredicted RBP10.53□□□□□ -0.72
ATXN3-215ENST00000532032 NUTM2AQ8IVF1 878 aaPredicted RBP10.53□□□□□ -0.72
ATXN3-215ENST00000532032 SLC16A10Q8TF71 515 aa10.53□□□□□ -0.72
ATXN3-215ENST00000532032 TSC1Q92574 1164 aa10.53□□□□□ -0.72
ATXN3-215ENST00000532032 WDR4P57081 412 aaKnown RBP10.52□□□□□ -0.73
ATXN3-215ENST00000532032 ZFP42Q96MM3 310 aa10.52□□□□□ -0.73
ATXN3-215ENST00000532032 STK17AQ9UEE5 414 aa10.52□□□□□ -0.73
ATXN3-215ENST00000532032 MRPL14Q6P1L8 145 aaKnown RBP10.51□□□□□ -0.73
ATXN3-215ENST00000532032 BPHLQ86WA6 291 aaPredicted RBP10.51□□□□□ -0.73
ATXN3-215ENST00000532032 NPAS3Q8IXF0 933 aa10.51□□□□□ -0.73
ATXN3-215ENST00000532032 KLF16Q9BXK1 252 aaPredicted RBP10.51□□□□□ -0.73
ATXN3-215ENST00000532032 SCARF1Q14162 830 aa10.5□□□□□ -0.73
ATXN3-215ENST00000532032 ARID5BQ14865 1188 aa10.5□□□□□ -0.73
ATXN3-215ENST00000532032 AGERQ15109 404 aa10.5□□□□□ -0.73
ATXN3-215ENST00000532032 C4orf48Q5BLP8 95 aa10.5□□□□□ -0.73
ATXN3-215ENST00000532032 ARMC2Q8NEN0 867 aa10.5□□□□□ -0.73
ATXN3-215ENST00000532032 CLK2P49760 499 aaKnown RBP10.49□□□□□ -0.73
ATXN3-215ENST00000532032 HELBQ8NG08 1087 aaPredicted RBP10.49□□□□□ -0.73
ATXN3-215ENST00000532032 NR5A1Q13285 461 aa10.48□□□□□ -0.73
ATXN3-215ENST00000532032 NACADO15069 1562 aa10.48□□□□□ -0.73
ATXN3-215ENST00000532032 RTL5Q5HYW3 569 aaPredicted RBP10.47□□□□□ -0.73
ATXN3-215ENST00000532032 PURBQ96QR8 312 aaKnown RBP10.47□□□□□ -0.73
ATXN3-215ENST00000532032 RSPH6AQ9H0K4 717 aa10.47□□□□□ -0.73
ATXN3-215ENST00000532032 GRM5P41594 1212 aa10.46□□□□□ -0.73
ATXN3-215ENST00000532032 NBPF14Q5TI25 921 aa10.46□□□□□ -0.73
ATXN3-215ENST00000532032 ZIC2O95409 532 aaPredicted RBP10.45□□□□□ -0.74
ATXN3-215ENST00000532032 NR3C2P08235 984 aa10.45□□□□□ -0.74
ATXN3-215ENST00000532032 SH3RF1Q7Z6J0 888 aa10.45□□□□□ -0.74
ATXN3-215ENST00000532032 IRF7Q92985 503 aa10.45□□□□□ -0.74
ATXN3-215ENST00000532032 ITPKCQ96DU7 683 aa10.45□□□□□ -0.74
ATXN3-215ENST00000532032 C1QTNF2Q9BXJ5 285 aa10.45□□□□□ -0.74
ATXN3-215ENST00000532032 H3BM21 787 aa10.44□□□□□ -0.74
ATXN3-215ENST00000532032 ZFAND3Q9H8U3 227 aa10.44□□□□□ -0.74
ATXN3-215ENST00000532032 POLR3EQ9NVU0 708 aa10.44□□□□□ -0.74
ATXN3-215ENST00000532032 VEGFBP49765 207 aa10.43□□□□□ -0.74
ATXN3-215ENST00000532032 SH3BP5LQ7L8J4 393 aa10.43□□□□□ -0.74
ATXN3-215ENST00000532032 GMPRP36959 345 aa10.42□□□□□ -0.74
ATXN3-215ENST00000532032 MAP4K5Q9Y4K4 846 aa10.42□□□□□ -0.74
ATXN3-215ENST00000532032 TRMT44Q8IYL2 757 aaKnown RBP10.41□□□□□ -0.74
ATXN3-215ENST00000532032 FSHRP23945 695 aa10.4□□□□□ -0.74
ATXN3-215ENST00000532032 GPKOWQ92917 476 aaPredicted RBP eCLIP10.4□□□□□ -0.74
ATXN3-215ENST00000532032 MAGEB6P1A0A0J9YX57 407 aa10.39□□□□□ -0.75
ATXN3-215ENST00000532032 SOBPA7XYQ1 873 aa10.39□□□□□ -0.75
ATXN3-215ENST00000532032 VASH1Q7L8A9 365 aaPredicted RBP10.39□□□□□ -0.75
ATXN3-215ENST00000532032 ERBB4Q15303 1308 aa10.38□□□□□ -0.75
ATXN3-215ENST00000532032 CTDSPL2Q05D32 466 aa10.38□□□□□ -0.75
ATXN3-215ENST00000532032 C6orf118Q5T5N4 469 aa10.38□□□□□ -0.75
ATXN3-215ENST00000532032 LINC00528Q8N1L1 170 aa10.37□□□□□ -0.75
ATXN3-215ENST00000532032 MEIOBQ8N635 442 aa10.37□□□□□ -0.75
ATXN3-215ENST00000532032 UPP2O95045 317 aa10.36□□□□□ -0.75
ATXN3-215ENST00000532032 CARD14Q9BXL6 1004 aa10.36□□□□□ -0.75
ATXN3-215ENST00000532032 MAN1A2O60476 641 aa10.35□□□□□ -0.75
ATXN3-215ENST00000532032 BMP2P12643 396 aa10.35□□□□□ -0.75
ATXN3-215ENST00000532032 SKIV2LQ15477 1246 aaKnown RBP10.35□□□□□ -0.75
ATXN3-215ENST00000532032 ERFEQ4G0M1 354 aa10.35□□□□□ -0.75
ATXN3-215ENST00000532032 SH3D19Q5HYK7 790 aa10.35□□□□□ -0.75
ATXN3-215ENST00000532032 CCDC116Q8IYX3 515 aa10.35□□□□□ -0.75
ATXN3-215ENST00000532032 EMILIN1Q9Y6C2 1016 aa10.35□□□□□ -0.75
ATXN3-215ENST00000532032 FAM181BA6NEQ2 426 aa10.34□□□□□ -0.75
ATXN3-215ENST00000532032 LORP23490 312 aaPredicted RBP10.34□□□□□ -0.75
ATXN3-215ENST00000532032 ZSCAN1Q8NBB4 408 aa10.34□□□□□ -0.75
ATXN3-215ENST00000532032 PDXDC2PQ6P474 469 aa10.33□□□□□ -0.76
ATXN3-215ENST00000532032 LRRN4Q8WUT4 740 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms