RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 MON2Q7Z3U7 1717 aa16.37■□□□□ 0.21
PPFIA1-220ENST00000532024 TRPM3Q9HCF6 1732 aaPredicted RBP16.37■□□□□ 0.21
PPFIA1-220ENST00000532024 LMOD2Q6P5Q4 547 aa16.37■□□□□ 0.21
PPFIA1-220ENST00000532024 SPATA31A3Q5VYP0 1347 aa16.37■□□□□ 0.21
PPFIA1-220ENST00000532024 KIF7Q2M1P5 1343 aa16.36■□□□□ 0.21
PPFIA1-220ENST00000532024 A0A1W2PP64 1363 aa16.36■□□□□ 0.21
PPFIA1-220ENST00000532024 EDC4Q6P2E9 1401 aaKnown RBP16.36■□□□□ 0.21
PPFIA1-220ENST00000532024 SPATA31A6Q5VVP1 1343 aa16.35■□□□□ 0.21
PPFIA1-220ENST00000532024 TTC21AQ8NDW8 1320 aa16.35■□□□□ 0.21
PPFIA1-220ENST00000532024 PNPLA6Q8IY17 1366 aa16.35■□□□□ 0.21
PPFIA1-220ENST00000532024 CCDC7Q96M83 1385 aa16.35■□□□□ 0.21
PPFIA1-220ENST00000532024 CD163L1Q9NR16 1453 aa16.35■□□□□ 0.21
PPFIA1-220ENST00000532024 NRKQ7Z2Y5 1582 aa16.34■□□□□ 0.21
PPFIA1-220ENST00000532024 COL22A1Q8NFW1 1626 aaPredicted RBP16.34■□□□□ 0.21
PPFIA1-220ENST00000532024 ALS2Q96Q42 1657 aa16.34■□□□□ 0.21
PPFIA1-220ENST00000532024 C11orf95C9JLR9 678 aaPredicted RBP16.32■□□□□ 0.2
PPFIA1-220ENST00000532024 HAP1P54257 671 aaPredicted RBP16.32■□□□□ 0.2
PPFIA1-220ENST00000532024 ABTB2Q8N961 1025 aa16.32■□□□□ 0.2
PPFIA1-220ENST00000532024 WASHC2AQ641Q2 1341 aa16.31■□□□□ 0.2
PPFIA1-220ENST00000532024 TTC21BQ7Z4L5 1316 aa16.31■□□□□ 0.2
PPFIA1-220ENST00000532024 SSH2Q76I76 1423 aa16.3■□□□□ 0.2
PPFIA1-220ENST00000532024 NLRP13Q86W25 1043 aa16.29■□□□□ 0.2
PPFIA1-220ENST00000532024 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.29■□□□□ 0.27e-6■■■■□ 19.6
PPFIA1-220ENST00000532024 PIK3C2AO00443 1686 aa16.28■□□□□ 0.2
PPFIA1-220ENST00000532024 NSD3Q9BZ95 1437 aa16.28■□□□□ 0.2
PPFIA1-220ENST00000532024 NLRP6P59044 892 aa16.27■□□□□ 0.2
PPFIA1-220ENST00000532024 CGNL1Q0VF96 1302 aa16.26■□□□□ 0.19
PPFIA1-220ENST00000532024 NUTM2BA6NNL0 878 aaPredicted RBP16.26■□□□□ 0.19
PPFIA1-220ENST00000532024 NUTM2EB1AL46 878 aaPredicted RBP16.26■□□□□ 0.19
PPFIA1-220ENST00000532024 MEX3CQ5U5Q3 659 aaKnown RBP16.26■□□□□ 0.19
PPFIA1-220ENST00000532024 NUTM2AQ8IVF1 878 aaPredicted RBP16.26■□□□□ 0.19
PPFIA1-220ENST00000532024 PHF23Q9BUL5 403 aaPredicted RBP16.26■□□□□ 0.19
PPFIA1-220ENST00000532024 PANK3Q9H999 370 aa16.26■□□□□ 0.19
PPFIA1-220ENST00000532024 ABCA3Q99758 1704 aa16.25■□□□□ 0.19
PPFIA1-220ENST00000532024 NUTM2GQ5VZR2 741 aa16.25■□□□□ 0.19
PPFIA1-220ENST00000532024 KNSTRNQ9Y448 316 aa16.25■□□□□ 0.19
PPFIA1-220ENST00000532024 KIF20BQ96Q89 1820 aa16.24■□□□□ 0.19
PPFIA1-220ENST00000532024 PHRF1Q9P1Y6 1649 aaKnown RBP16.24■□□□□ 0.19
PPFIA1-220ENST00000532024 PLEKHG5O94827 1062 aa16.24■□□□□ 0.19
PPFIA1-220ENST00000532024 USP31Q70CQ4 1352 aa16.24■□□□□ 0.19
PPFIA1-220ENST00000532024 USP54Q70EL1 1684 aa16.24■□□□□ 0.19
PPFIA1-220ENST00000532024 USP19O94966 1318 aa16.23■□□□□ 0.19
PPFIA1-220ENST00000532024 CRYBG1Q9Y4K1 1723 aa16.23■□□□□ 0.19
PPFIA1-220ENST00000532024 NME9Q86XW9 330 aa16.23■□□□□ 0.19
PPFIA1-220ENST00000532024 KCNH5Q8NCM2 988 aa16.23■□□□□ 0.19
PPFIA1-220ENST00000532024 COG3Q96JB2 828 aa16.23■□□□□ 0.19
PPFIA1-220ENST00000532024 CABLES1Q8TDN4 633 aa16.22■□□□□ 0.19
PPFIA1-220ENST00000532024 CARD14Q9BXL6 1004 aa16.22■□□□□ 0.19
PPFIA1-220ENST00000532024 SLIT3O75094 1523 aa16.22■□□□□ 0.19
PPFIA1-220ENST00000532024 LRP6O75581 1613 aa16.22■□□□□ 0.19
PPFIA1-220ENST00000532024 NSD2O96028 1365 aa16.22■□□□□ 0.19
PPFIA1-220ENST00000532024 ZNF316A6NFI3 1004 aaPredicted RBP16.21■□□□□ 0.19
PPFIA1-220ENST00000532024 ADAMTS2O95450 1211 aa16.21■□□□□ 0.19
PPFIA1-220ENST00000532024 OVOS2A0A0J9YW53 1432 aa16.2■□□□□ 0.18
PPFIA1-220ENST00000532024 OVOS2Q6IE36 1432 aa16.2■□□□□ 0.18
PPFIA1-220ENST00000532024 MARF1Q9Y4F3 1742 aaKnown RBP16.2■□□□□ 0.18
PPFIA1-220ENST00000532024 GCP02774 474 aa16.19■□□□□ 0.18
PPFIA1-220ENST00000532024 FYB1O15117 783 aa16.18■□□□□ 0.18
PPFIA1-220ENST00000532024 GGNBP2Q9H3C7 697 aa16.18■□□□□ 0.18
PPFIA1-220ENST00000532024 PRDM11Q9NQV5 511 aa16.18■□□□□ 0.18
PPFIA1-220ENST00000532024 ANKRD26Q9UPS8 1709 aa16.17■□□□□ 0.18
PPFIA1-220ENST00000532024 NGLY1Q96IV0 654 aa16.17■□□□□ 0.18
PPFIA1-220ENST00000532024 C8orf37Q96NL8 207 aa16.17■□□□□ 0.18
PPFIA1-220ENST00000532024 CPDO75976 1380 aa16.16■□□□□ 0.18
PPFIA1-220ENST00000532024 COL14A1Q05707 1796 aaKnown RBP16.16■□□□□ 0.18
PPFIA1-220ENST00000532024 KIAA0232Q92628 1395 aa16.15■□□□□ 0.18
PPFIA1-220ENST00000532024 SOX12O15370 315 aa16.15■□□□□ 0.18
PPFIA1-220ENST00000532024 ZC3H6P61129 1189 aaKnown RBP16.15■□□□□ 0.18
PPFIA1-220ENST00000532024 ZRANB1Q9UGI0 708 aa16.15■□□□□ 0.18
PPFIA1-220ENST00000532024 NFAT5O94916 1531 aa16.14■□□□□ 0.18
PPFIA1-220ENST00000532024 ABCC6O95255 1503 aa16.14■□□□□ 0.17
PPFIA1-220ENST00000532024 NPC1L1Q9UHC9 1359 aa16.13■□□□□ 0.17
PPFIA1-220ENST00000532024 ZBTB7CA1YPR0 619 aa16.13■□□□□ 0.17
PPFIA1-220ENST00000532024 DDX10Q13206 875 aaKnown RBP16.13■□□□□ 0.17
PPFIA1-220ENST00000532024 MORC1Q86VD1 984 aa16.13■□□□□ 0.17
PPFIA1-220ENST00000532024 PLCH1Q4KWH8 1693 aa16.13■□□□□ 0.17
PPFIA1-220ENST00000532024 NWD2Q9ULI1 1742 aa16.13■□□□□ 0.17
PPFIA1-220ENST00000532024 PER1O15534 1290 aaPredicted RBP16.12■□□□□ 0.17
PPFIA1-220ENST00000532024 ZNF772Q68DY9 489 aaPredicted RBP16.12■□□□□ 0.17
PPFIA1-220ENST00000532024 AFF2P51816 1311 aa16.12■□□□□ 0.17
PPFIA1-220ENST00000532024 AMER1Q5JTC6 1135 aaPredicted RBP16.11■□□□□ 0.17
PPFIA1-220ENST00000532024 AATKQ6ZMQ8 1374 aa16.11■□□□□ 0.17
PPFIA1-220ENST00000532024 LTN1O94822 1766 aa16.1■□□□□ 0.17
PPFIA1-220ENST00000532024 ARHGEF25Q86VW2 580 aa16.1■□□□□ 0.17
PPFIA1-220ENST00000532024 FNBP4Q8N3X1 1017 aaPredicted RBP16.1■□□□□ 0.17
PPFIA1-220ENST00000532024 SLIT2O94813 1529 aa16.09■□□□□ 0.17
PPFIA1-220ENST00000532024 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.09■□□□□ 0.17
PPFIA1-220ENST00000532024 FAM83GA6ND36 823 aa16.09■□□□□ 0.17
PPFIA1-220ENST00000532024 CHRNA2Q15822 529 aa16.09■□□□□ 0.17
PPFIA1-220ENST00000532024 USP21Q9UK80 565 aa16.09■□□□□ 0.17
PPFIA1-220ENST00000532024 RTL1A6NKG5 1358 aa16.09■□□□□ 0.17
PPFIA1-220ENST00000532024 KIF24Q5T7B8 1368 aa16.09■□□□□ 0.17
PPFIA1-220ENST00000532024 AMPHP49418 695 aa16.08■□□□□ 0.16
PPFIA1-220ENST00000532024 CC2D1BQ5T0F9 858 aaKnown RBP16.08■□□□□ 0.16
PPFIA1-220ENST00000532024 BTG4Q9NY30 223 aa16.08■□□□□ 0.16
PPFIA1-220ENST00000532024 LMO7Q8WWI1 1683 aa16.08■□□□□ 0.16
PPFIA1-220ENST00000532024 UNC5CLQ8IV45 518 aa16.07■□□□□ 0.16
PPFIA1-220ENST00000532024 BLMP54132 1417 aaPredicted RBP16.07■□□□□ 0.16
PPFIA1-220ENST00000532024 MAP3K19Q56UN5 1328 aa16.06■□□□□ 0.16
PPFIA1-220ENST00000532024 TNNT2P45379 298 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms