RNA–Protein interactions for RNA: ENST00000532001.6

PTP4A2-213, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 911 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-213ENST00000532001 GOLGA2Q08379 1002 aa12.91□□□□□ -0.34
PTP4A2-213ENST00000532001 LRP6O75581 1613 aa12.91□□□□□ -0.34
PTP4A2-213ENST00000532001 SPATA31E1Q6ZUB1 1445 aa12.9□□□□□ -0.34
PTP4A2-213ENST00000532001 BRINP3Q76B58 766 aa12.9□□□□□ -0.34
PTP4A2-213ENST00000532001 OCEL1Q9H607 264 aa12.9□□□□□ -0.34
PTP4A2-213ENST00000532001 CCDC144AA2RUR9 1427 aa12.89□□□□□ -0.35
PTP4A2-213ENST00000532001 SETD5Q9C0A6 1442 aa12.89□□□□□ -0.35
PTP4A2-213ENST00000532001 KNDC1Q76NI1 1749 aa12.88□□□□□ -0.35
PTP4A2-213ENST00000532001 MKRN3Q13064 507 aaKnown RBP12.88□□□□□ -0.35
PTP4A2-213ENST00000532001 CDC42BPGQ6DT37 1551 aa12.87□□□□□ -0.35
PTP4A2-213ENST00000532001 ROBO2Q9HCK4 1378 aa12.87□□□□□ -0.35
PTP4A2-213ENST00000532001 SCUBE2Q9NQ36 999 aa12.87□□□□□ -0.35
PTP4A2-213ENST00000532001 TECPR2O15040 1411 aa12.87□□□□□ -0.35
PTP4A2-213ENST00000532001 C1orf167Q5SNV9 1468 aa12.86□□□□□ -0.35
PTP4A2-213ENST00000532001 ANKRD30BQ9BXX2 1392 aa12.86□□□□□ -0.35
PTP4A2-213ENST00000532001 POTEAQ6S8J7 498 aa12.86□□□□□ -0.35
PTP4A2-213ENST00000532001 CABP2Q9NPB3 220 aa12.86□□□□□ -0.35
PTP4A2-213ENST00000532001 PDCD7Q8N8D1 485 aaKnown RBP12.84□□□□□ -0.35
PTP4A2-213ENST00000532001 MPHOSPH9Q99550 1183 aa12.84□□□□□ -0.35
PTP4A2-213ENST00000532001 PIK3C2GO75747 1445 aa12.84□□□□□ -0.35
PTP4A2-213ENST00000532001 ECM2O94769 699 aaPredicted RBP12.83□□□□□ -0.36
PTP4A2-213ENST00000532001 MYOM2P54296 1465 aa12.82□□□□□ -0.36
PTP4A2-213ENST00000532001 NRXN1Q9ULB1 1477 aa12.82□□□□□ -0.36
PTP4A2-213ENST00000532001 ADGRF5Q8IZF2 1346 aa12.82□□□□□ -0.36
PTP4A2-213ENST00000532001 LRPPRCP42704 1394 aaKnown RBP12.81□□□□□ -0.36
PTP4A2-213ENST00000532001 TRIM26Q12899 539 aaPredicted RBP12.81□□□□□ -0.36
PTP4A2-213ENST00000532001 PNPLA6Q8IY17 1366 aa12.81□□□□□ -0.36
PTP4A2-213ENST00000532001 COL22A1Q8NFW1 1626 aaPredicted RBP12.8□□□□□ -0.36
PTP4A2-213ENST00000532001 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.8□□□□□ -0.36
PTP4A2-213ENST00000532001 ZNF772Q68DY9 489 aaPredicted RBP12.8□□□□□ -0.36
PTP4A2-213ENST00000532001 LRRC59Q96AG4 307 aaKnown RBP12.8□□□□□ -0.36
PTP4A2-213ENST00000532001 ZFP91Q96JP5 570 aaPredicted RBP12.8□□□□□ -0.36
PTP4A2-213ENST00000532001 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.8□□□□□ -0.36
PTP4A2-213ENST00000532001 ABCC11Q96J66 1382 aa12.8□□□□□ -0.36
PTP4A2-213ENST00000532001 CDK12Q9NYV4 1490 aaPredicted RBP12.79□□□□□ -0.36
PTP4A2-213ENST00000532001 MEX3CQ5U5Q3 659 aaKnown RBP12.79□□□□□ -0.36
PTP4A2-213ENST00000532001 FMN2Q9NZ56 1722 aa12.79□□□□□ -0.36
PTP4A2-213ENST00000532001 TAOK2Q9UL54 1235 aa12.78□□□□□ -0.36
PTP4A2-213ENST00000532001 SOS2Q07890 1332 aaPredicted RBP12.78□□□□□ -0.36
PTP4A2-213ENST00000532001 RAB3GAP2Q9H2M9 1393 aa12.78□□□□□ -0.36
PTP4A2-213ENST00000532001 YTHDC2Q9H6S0 1430 aaKnown RBP12.77□□□□□ -0.37
PTP4A2-213ENST00000532001 KIF1AQ12756 1690 aa12.77□□□□□ -0.37
PTP4A2-213ENST00000532001 RGL3Q3MIN7 710 aa12.76□□□□□ -0.37
PTP4A2-213ENST00000532001 PXDNQ92626 1479 aa12.76□□□□□ -0.37
PTP4A2-213ENST00000532001 RGL2O15211 777 aa12.75□□□□□ -0.37
PTP4A2-213ENST00000532001 SIRT1Q96EB6 747 aa12.75□□□□□ -0.37
PTP4A2-213ENST00000532001 DLC1Q96QB1 1528 aa12.74□□□□□ -0.37
PTP4A2-213ENST00000532001 EFCAB3Q8N7B9 438 aa12.74□□□□□ -0.37
PTP4A2-213ENST00000532001 DDX17Q92841 729 aaKnown RBP12.74□□□□□ -0.37
PTP4A2-213ENST00000532001 ORAI2Q96SN7 254 aa12.74□□□□□ -0.37
PTP4A2-213ENST00000532001 MARF1Q9Y4F3 1742 aaKnown RBP12.74□□□□□ -0.37
PTP4A2-213ENST00000532001 AFF2P51816 1311 aa12.73□□□□□ -0.37
PTP4A2-213ENST00000532001 NPHP3Q7Z494 1330 aa12.73□□□□□ -0.37
PTP4A2-213ENST00000532001 NUTM2BA6NNL0 878 aaPredicted RBP12.73□□□□□ -0.37
PTP4A2-213ENST00000532001 NUTM2EB1AL46 878 aaPredicted RBP12.73□□□□□ -0.37
PTP4A2-213ENST00000532001 NUTM2AQ8IVF1 878 aaPredicted RBP12.73□□□□□ -0.37
PTP4A2-213ENST00000532001 C14orf93Q9H972 538 aaKnown RBP12.73□□□□□ -0.37
PTP4A2-213ENST00000532001 ADGRB2O60241 1585 aa12.73□□□□□ -0.37
PTP4A2-213ENST00000532001 PLEKHH1Q9ULM0 1364 aa12.72□□□□□ -0.37
PTP4A2-213ENST00000532001 HRCP23327 699 aa12.72□□□□□ -0.37
PTP4A2-213ENST00000532001 ADGRB1O14514 1584 aa12.72□□□□□ -0.37
PTP4A2-213ENST00000532001 L3MBTL3Q96JM7 780 aaPredicted RBP12.71□□□□□ -0.37
PTP4A2-213ENST00000532001 DHX57Q6P158 1386 aaKnown RBP12.7□□□□□ -0.38
PTP4A2-213ENST00000532001 RXRBP28702 533 aa12.7□□□□□ -0.38
PTP4A2-213ENST00000532001 TMEM132EQ6IEE7 984 aa12.7□□□□□ -0.38
PTP4A2-213ENST00000532001 WAPLQ7Z5K2 1190 aa12.7□□□□□ -0.38
PTP4A2-213ENST00000532001 STK26Q9P289 416 aa12.7□□□□□ -0.38
PTP4A2-213ENST00000532001 RGPD8O14715 1765 aaPredicted RBP12.7□□□□□ -0.38
PTP4A2-213ENST00000532001 ESCO1Q5FWF5 840 aa12.69□□□□□ -0.38
PTP4A2-213ENST00000532001 C8orf37Q96NL8 207 aa12.69□□□□□ -0.38
PTP4A2-213ENST00000532001 BCL11BQ9C0K0 894 aaPredicted RBP12.69□□□□□ -0.38
PTP4A2-213ENST00000532001 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.68□□□□□ -0.38
PTP4A2-213ENST00000532001 RGS12O14924 1447 aa12.68□□□□□ -0.38
PTP4A2-213ENST00000532001 USP32Q8NFA0 1604 aa12.67□□□□□ -0.38
PTP4A2-213ENST00000532001 SOX12O15370 315 aa12.67□□□□□ -0.38
PTP4A2-213ENST00000532001 RBM6P78332 1123 aaKnown RBP12.67□□□□□ -0.38
PTP4A2-213ENST00000532001 CFAP70Q5T0N1 1121 aa12.67□□□□□ -0.38
PTP4A2-213ENST00000532001 DPY19L2Q6NUT2 758 aa12.67□□□□□ -0.38
PTP4A2-213ENST00000532001 STAC3Q96MF2 364 aa12.67□□□□□ -0.38
PTP4A2-213ENST00000532001 ANKARQ7Z5J8 1434 aa12.67□□□□□ -0.38
PTP4A2-213ENST00000532001 ATRNO75882 1429 aa12.66□□□□□ -0.38
PTP4A2-213ENST00000532001 FNBP4Q8N3X1 1017 aaPredicted RBP12.66□□□□□ -0.38
PTP4A2-213ENST00000532001 SLAIN1Q8ND83 568 aa12.66□□□□□ -0.38
PTP4A2-213ENST00000532001 ABCA3Q99758 1704 aa12.65□□□□□ -0.38
PTP4A2-213ENST00000532001 POTEMA6NI47 508 aa12.65□□□□□ -0.38
PTP4A2-213ENST00000532001 STK25O00506 426 aa12.65□□□□□ -0.38
PTP4A2-213ENST00000532001 FOXO3O43524 673 aa12.65□□□□□ -0.38
PTP4A2-213ENST00000532001 ADAMTS2O95450 1211 aa12.65□□□□□ -0.38
PTP4A2-213ENST00000532001 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.65□□□□□ -0.38
PTP4A2-213ENST00000532001 ARHGEF28Q8N1W1 1705 aaKnown RBP12.65□□□□□ -0.38
PTP4A2-213ENST00000532001 UPF1Q92900 1129 aaKnown RBP eCLIP12.64□□□□□ -0.396e-11■□□□□ 10.7
PTP4A2-213ENST00000532001 NGLY1Q96IV0 654 aa12.64□□□□□ -0.39
PTP4A2-213ENST00000532001 PCGF6Q9BYE7 350 aa12.64□□□□□ -0.39
PTP4A2-213ENST00000532001 QTRT2Q9H974 415 aaKnown RBP12.64□□□□□ -0.39
PTP4A2-213ENST00000532001 STK24Q9Y6E0 443 aa12.64□□□□□ -0.39
PTP4A2-213ENST00000532001 KIAA1210Q9ULL0 1709 aa12.64□□□□□ -0.39
PTP4A2-213ENST00000532001 SPATA31A3Q5VYP0 1347 aa12.63□□□□□ -0.39
PTP4A2-213ENST00000532001 TNS3Q68CZ2 1445 aa12.63□□□□□ -0.39
PTP4A2-213ENST00000532001 PRAM1Q96QH2 718 aa12.63□□□□□ -0.39
PTP4A2-213ENST00000532001 TRPC5Q9UL62 973 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms