RNA–Protein interactions for RNA: ENST00000531931.1

EEF1D-241, Transcript of eukaryotic translation elongation factor 1 delta, human

TSL 3

Gene EEF1D, Length 614 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EEF1D-241	ENST00000531931	USP47	Q96K76	1375 aa		32.54	■■■□□ 2.8
EEF1D-241	ENST00000531931	QTRT2	Q9H974	415 aa	Known RBP	32.5	■■■□□ 2.79
EEF1D-241	ENST00000531931	ALS2	Q96Q42	1657 aa		32.5	■■■□□ 2.79
EEF1D-241	ENST00000531931	FNBP4	Q8N3X1	1017 aa	Predicted RBP	32.49	■■■□□ 2.79
EEF1D-241	ENST00000531931	USP21	Q9UK80	565 aa		32.49	■■■□□ 2.79
EEF1D-241	ENST00000531931	ATAD2	Q6PL18	1390 aa		32.48	■■■□□ 2.79
EEF1D-241	ENST00000531931	ABTB2	Q8N961	1025 aa		32.48	■■■□□ 2.79
EEF1D-241	ENST00000531931	TMC1	Q8TDI8	760 aa		32.48	■■■□□ 2.79
EEF1D-241	ENST00000531931	SLC12A5	Q9H2X9	1139 aa		32.46	■■■□□ 2.79
EEF1D-241	ENST00000531931	FAM83G	A6ND36	823 aa		32.43	■■■□□ 2.78
EEF1D-241	ENST00000531931	RXRB	P28702	533 aa		32.43	■■■□□ 2.78
EEF1D-241	ENST00000531931	USP6	P35125	1406 aa		32.43	■■■□□ 2.78
EEF1D-241	ENST00000531931	ZNF692	Q9BU19	519 aa	Predicted RBP	32.42	■■■□□ 2.78
EEF1D-241	ENST00000531931	MARF1	Q9Y4F3	1742 aa	Known RBP	32.4	■■■□□ 2.78
EEF1D-241	ENST00000531931	PUS7	Q96PZ0	661 aa	Known RBP	32.39	■■■□□ 2.78
EEF1D-241	ENST00000531931	BCL9L	Q86UU0	1499 aa		32.38	■■■□□ 2.77
EEF1D-241	ENST00000531931	SLC24A1	O60721	1099 aa		32.38	■■■□□ 2.77
EEF1D-241	ENST00000531931	TMF1	P82094	1093 aa		32.38	■■■□□ 2.77
EEF1D-241	ENST00000531931	ABCA3	Q99758	1704 aa		32.37	■■■□□ 2.77
EEF1D-241	ENST00000531931	CPSF1	Q10570	1443 aa	Known RBP	32.36	■■■□□ 2.77
EEF1D-241	ENST00000531931	SSH2	Q76I76	1423 aa		32.36	■■■□□ 2.77
EEF1D-241	ENST00000531931	KTN1	Q86UP2	1357 aa	Known RBP	32.36	■■■□□ 2.77
EEF1D-241	ENST00000531931	TTC21B	Q7Z4L5	1316 aa		32.36	■■■□□ 2.77
EEF1D-241	ENST00000531931	ZC3H6	P61129	1189 aa	Known RBP	32.36	■■■□□ 2.77
EEF1D-241	ENST00000531931	NLRP13	Q86W25	1043 aa		32.36	■■■□□ 2.77
EEF1D-241	ENST00000531931	TRPC5	Q9UL62	973 aa	Predicted RBP	32.36	■■■□□ 2.77
EEF1D-241	ENST00000531931	NLRP6	P59044	892 aa		32.35	■■■□□ 2.77
EEF1D-241	ENST00000531931	BRD4	O60885	1362 aa	Predicted RBP	32.34	■■■□□ 2.77
EEF1D-241	ENST00000531931	RBM6	P78332	1123 aa	Known RBP	32.34	■■■□□ 2.77
EEF1D-241	ENST00000531931	UNC5CL	Q8IV45	518 aa		32.34	■■■□□ 2.77
EEF1D-241	ENST00000531931	SLIT2	O94813	1529 aa		32.33	■■■□□ 2.77
EEF1D-241	ENST00000531931	CD163L1	Q9NR16	1453 aa		32.32	■■■□□ 2.76
EEF1D-241	ENST00000531931	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	32.32	■■■□□ 2.76
EEF1D-241	ENST00000531931	HSPA5	P11021	654 aa	Known RBP	32.31	■■■□□ 2.76
EEF1D-241	ENST00000531931	CHRNA2	Q15822	529 aa		32.31	■■■□□ 2.76
EEF1D-241	ENST00000531931	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	32.31	■■■□□ 2.76
EEF1D-241	ENST00000531931	ATRN	O75882	1429 aa		32.3	■■■□□ 2.76
EEF1D-241	ENST00000531931	EIF4G2	P78344	907 aa	Known RBP eCLIP	32.3	■■■□□ 2.76	4e-8	■□□□□ 9.9
EEF1D-241	ENST00000531931	PRDM11	Q9NQV5	511 aa		32.3	■■■□□ 2.76
EEF1D-241	ENST00000531931	CRYBG1	Q9Y4K1	1723 aa		32.3	■■■□□ 2.76
EEF1D-241	ENST00000531931	AKAP12	Q02952	1782 aa		32.3	■■■□□ 2.76
EEF1D-241	ENST00000531931	USP19	O94966	1318 aa		32.29	■■■□□ 2.76
EEF1D-241	ENST00000531931	GC	P02774	474 aa		32.29	■■■□□ 2.76
EEF1D-241	ENST00000531931	BTG4	Q9NY30	223 aa		32.29	■■■□□ 2.76
EEF1D-241	ENST00000531931	TERF2IP	Q9NYB0	399 aa		32.29	■■■□□ 2.76
EEF1D-241	ENST00000531931	KIAA0232	Q92628	1395 aa		32.29	■■■□□ 2.76
EEF1D-241	ENST00000531931	ZRANB1	Q9UGI0	708 aa		32.28	■■■□□ 2.76
EEF1D-241	ENST00000531931	GJD4	Q96KN9	370 aa	Predicted RBP	32.26	■■■□□ 2.75
EEF1D-241	ENST00000531931		A0A1W2PP64	1363 aa		32.25	■■■□□ 2.75
EEF1D-241	ENST00000531931	TTC21A	Q8NDW8	1320 aa		32.25	■■■□□ 2.75
EEF1D-241	ENST00000531931	PHRF1	Q9P1Y6	1649 aa	Known RBP	32.23	■■■□□ 2.75
EEF1D-241	ENST00000531931	CDCA8	Q53HL2	280 aa		32.23	■■■□□ 2.75
EEF1D-241	ENST00000531931	NME9	Q86XW9	330 aa		32.23	■■■□□ 2.75
EEF1D-241	ENST00000531931	ZBTB7C	A1YPR0	619 aa		32.22	■■■□□ 2.75
EEF1D-241	ENST00000531931	CCDC9	Q9Y3X0	531 aa	Known RBP	32.22	■■■□□ 2.75
EEF1D-241	ENST00000531931	PIK3C2A	O00443	1686 aa		32.21	■■■□□ 2.75
EEF1D-241	ENST00000531931	PLCH1	Q4KWH8	1693 aa		32.21	■■■□□ 2.75
EEF1D-241	ENST00000531931	SOX12	O15370	315 aa		32.21	■■■□□ 2.75
EEF1D-241	ENST00000531931	VPS72	Q15906	364 aa		32.2	■■■□□ 2.75
EEF1D-241	ENST00000531931	POLR3GL	Q9BT43	218 aa		32.2	■■■□□ 2.75
EEF1D-241	ENST00000531931	MON2	Q7Z3U7	1717 aa		32.19	■■■□□ 2.74
EEF1D-241	ENST00000531931	NINL	Q9Y2I6	1382 aa		32.19	■■■□□ 2.74
EEF1D-241	ENST00000531931	COL14A1	Q05707	1796 aa	Known RBP	32.18	■■■□□ 2.74
EEF1D-241	ENST00000531931	RGS12	O14924	1447 aa		32.17	■■■□□ 2.74
EEF1D-241	ENST00000531931	NRK	Q7Z2Y5	1582 aa		32.17	■■■□□ 2.74
EEF1D-241	ENST00000531931	STRN4	Q9NRL3	753 aa		32.16	■■■□□ 2.74
EEF1D-241	ENST00000531931	EDC4	Q6P2E9	1401 aa	Known RBP	32.16	■■■□□ 2.74
EEF1D-241	ENST00000531931	CDK12	Q9NYV4	1490 aa	Predicted RBP	32.16	■■■□□ 2.74
EEF1D-241	ENST00000531931	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.15	■■■□□ 2.74
EEF1D-241	ENST00000531931	NWD2	Q9ULI1	1742 aa		32.14	■■■□□ 2.74
EEF1D-241	ENST00000531931	CPD	O75976	1380 aa		32.14	■■■□□ 2.74
EEF1D-241	ENST00000531931	SLIT3	O75094	1523 aa		32.12	■■■□□ 2.73
EEF1D-241	ENST00000531931	ANKRD36B	Q8N2N9	1353 aa		32.12	■■■□□ 2.73
EEF1D-241	ENST00000531931	EVA1C	P58658	441 aa		32.11	■■■□□ 2.73
EEF1D-241	ENST00000531931	KCNH5	Q8NCM2	988 aa		32.11	■■■□□ 2.73
EEF1D-241	ENST00000531931	GLI3	P10071	1580 aa		32.11	■■■□□ 2.73
EEF1D-241	ENST00000531931	USP31	Q70CQ4	1352 aa		32.1	■■■□□ 2.73
EEF1D-241	ENST00000531931	C11orf95	C9JLR9	678 aa	Predicted RBP	32.1	■■■□□ 2.73
EEF1D-241	ENST00000531931	NRAP	Q86VF7	1730 aa		32.09	■■■□□ 2.73
EEF1D-241	ENST00000531931	ARHGEF25	Q86VW2	580 aa		32.08	■■■□□ 2.73
EEF1D-241	ENST00000531931	CAMTA1	Q9Y6Y1	1673 aa		32.08	■■■□□ 2.73
EEF1D-241	ENST00000531931	CARD14	Q9BXL6	1004 aa		32.07	■■■□□ 2.72
EEF1D-241	ENST00000531931	SPATA31A5	Q5VU36	1347 aa		32.06	■■■□□ 2.72
EEF1D-241	ENST00000531931	SPATA31A7	Q8IWB4	1347 aa		32.06	■■■□□ 2.72
EEF1D-241	ENST00000531931	AXIN2	Q9Y2T1	843 aa		32.06	■■■□□ 2.72
EEF1D-241	ENST00000531931	FAM98C	Q17RN3	349 aa	Known RBP	32.05	■■■□□ 2.72
EEF1D-241	ENST00000531931	LARP1	Q6PKG0	1096 aa	Known RBP	32.04	■■■□□ 2.72
EEF1D-241	ENST00000531931	SEPT12	Q8IYM1	358 aa		32.04	■■■□□ 2.72
EEF1D-241	ENST00000531931	USP35	Q9P2H5	1018 aa		32.04	■■■□□ 2.72
EEF1D-241	ENST00000531931	AATK	Q6ZMQ8	1374 aa		32.03	■■■□□ 2.72
EEF1D-241	ENST00000531931	FYB1	O15117	783 aa		32.02	■■■□□ 2.72
EEF1D-241	ENST00000531931	ONECUT3	O60422	494 aa	Predicted RBP	32.02	■■■□□ 2.72
EEF1D-241	ENST00000531931		A0A0G2JS52	829 aa		32.01	■■■□□ 2.71
EEF1D-241	ENST00000531931	MYT1	Q01538	1121 aa		32.01	■■■□□ 2.71
EEF1D-241	ENST00000531931	GGNBP2	Q9H3C7	697 aa		32.01	■■■□□ 2.71
EEF1D-241	ENST00000531931	FBLN1	P23142	703 aa		32	■■■□□ 2.71
EEF1D-241	ENST00000531931	COG3	Q96JB2	828 aa		32	■■■□□ 2.71
EEF1D-241	ENST00000531931	SPATA31A1	Q5TZJ5	1347 aa		32	■■■□□ 2.71
EEF1D-241	ENST00000531931	MYOM1	P52179	1685 aa		31.99	■■■□□ 2.71
EEF1D-241	ENST00000531931	LMO7	Q8WWI1	1683 aa		31.99	■■■□□ 2.71

Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms