RNA–Protein interactions for RNA: ENST00000531668.1

CAPRIN1-210, Transcript of cell cycle associated protein 1, humanhuman

TSL 3

Gene CAPRIN1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-210ENST00000531668 TMF1P82094 1093 aa23.92■■□□□ 1.42
CAPRIN1-210ENST00000531668 POTEAQ6S8J7 498 aa23.92■■□□□ 1.42
CAPRIN1-210ENST00000531668 ABTB2Q8N961 1025 aa23.92■■□□□ 1.42
CAPRIN1-210ENST00000531668 ZNF772Q68DY9 489 aaPredicted RBP23.91■■□□□ 1.42
CAPRIN1-210ENST00000531668 SLC24A1O60721 1099 aa23.9■■□□□ 1.42
CAPRIN1-210ENST00000531668 SLC12A5Q9H2X9 1139 aa23.89■■□□□ 1.41
CAPRIN1-210ENST00000531668 EIF4G2P78344 907 aaKnown RBP eCLIP23.88■■□□□ 1.41
CAPRIN1-210ENST00000531668 ALS2Q96Q42 1657 aa23.87■■□□□ 1.41
CAPRIN1-210ENST00000531668 POLR3GLQ9BT43 218 aa23.87■■□□□ 1.41
CAPRIN1-210ENST00000531668 ZNF692Q9BU19 519 aaPredicted RBP23.87■■□□□ 1.41
CAPRIN1-210ENST00000531668 HSPA5P11021 654 aaKnown RBP23.86■■□□□ 1.41
CAPRIN1-210ENST00000531668 USP21Q9UK80 565 aa23.86■■□□□ 1.41
CAPRIN1-210ENST00000531668 KTN1Q86UP2 1357 aaKnown RBP23.86■■□□□ 1.41
CAPRIN1-210ENST00000531668 USP6P35125 1406 aa23.85■■□□□ 1.41
CAPRIN1-210ENST00000531668 HDGFL2Q7Z4V5 671 aaPredicted RBP23.85■■□□□ 1.41
CAPRIN1-210ENST00000531668 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.83■■□□□ 1.41
CAPRIN1-210ENST00000531668 QTRT2Q9H974 415 aaKnown RBP23.83■■□□□ 1.41
CAPRIN1-210ENST00000531668 NLRP6P59044 892 aa23.82■■□□□ 1.4
CAPRIN1-210ENST00000531668 CDCA8Q53HL2 280 aa23.82■■□□□ 1.4
CAPRIN1-210ENST00000531668 NLRP13Q86W25 1043 aa23.82■■□□□ 1.4
CAPRIN1-210ENST00000531668 PUS7Q96PZ0 661 aaKnown RBP23.82■■□□□ 1.4
CAPRIN1-210ENST00000531668 TERF2IPQ9NYB0 399 aa23.82■■□□□ 1.4
CAPRIN1-210ENST00000531668 MARF1Q9Y4F3 1742 aaKnown RBP23.81■■□□□ 1.4
CAPRIN1-210ENST00000531668 TTC21BQ7Z4L5 1316 aa23.81■■□□□ 1.4
CAPRIN1-210ENST00000531668 ZBTB7CA1YPR0 619 aa23.8■■□□□ 1.4
CAPRIN1-210ENST00000531668 ZC3H6P61129 1189 aaKnown RBP23.8■■□□□ 1.4
CAPRIN1-210ENST00000531668 ABCA3Q99758 1704 aa23.8■■□□□ 1.4
CAPRIN1-210ENST00000531668 BRD4O60885 1362 aaPredicted RBP23.79■■□□□ 1.4
CAPRIN1-210ENST00000531668 AKAP12Q02952 1782 aa23.79■■□□□ 1.4
CAPRIN1-210ENST00000531668 RXRBP28702 533 aa23.79■■□□□ 1.4
CAPRIN1-210ENST00000531668 FNBP4Q8N3X1 1017 aaPredicted RBP23.79■■□□□ 1.4
CAPRIN1-210ENST00000531668 CPSF1Q10570 1443 aaKnown RBP23.78■■□□□ 1.4
CAPRIN1-210ENST00000531668 FAM83GA6ND36 823 aa23.78■■□□□ 1.4
CAPRIN1-210ENST00000531668 SOX12O15370 315 aa23.78■■□□□ 1.4
CAPRIN1-210ENST00000531668 PRDM11Q9NQV5 511 aa23.78■■□□□ 1.4
CAPRIN1-210ENST00000531668 CHRNA2Q15822 529 aa23.76■■□□□ 1.39
CAPRIN1-210ENST00000531668 TRPC5Q9UL62 973 aaPredicted RBP23.76■■□□□ 1.39
CAPRIN1-210ENST00000531668 A0A1W2PP64 1363 aa23.76■■□□□ 1.39
CAPRIN1-210ENST00000531668 CCDC9Q9Y3X0 531 aaKnown RBP23.75■■□□□ 1.39
CAPRIN1-210ENST00000531668 TTC21AQ8NDW8 1320 aa23.75■■□□□ 1.39
CAPRIN1-210ENST00000531668 CD163L1Q9NR16 1453 aa23.75■■□□□ 1.39
CAPRIN1-210ENST00000531668 UNC5CLQ8IV45 518 aa23.74■■□□□ 1.39
CAPRIN1-210ENST00000531668 SSH2Q76I76 1423 aa23.74■■□□□ 1.39
CAPRIN1-210ENST00000531668 GCP02774 474 aa23.73■■□□□ 1.39
CAPRIN1-210ENST00000531668 NME9Q86XW9 330 aa23.73■■□□□ 1.39
CAPRIN1-210ENST00000531668 BTG4Q9NY30 223 aa23.73■■□□□ 1.39
CAPRIN1-210ENST00000531668 ZRANB1Q9UGI0 708 aa23.73■■□□□ 1.39
CAPRIN1-210ENST00000531668 KIAA0232Q92628 1395 aa23.73■■□□□ 1.39
CAPRIN1-210ENST00000531668 NINLQ9Y2I6 1382 aa23.73■■□□□ 1.39
CAPRIN1-210ENST00000531668 RBM6P78332 1123 aaKnown RBP23.72■■□□□ 1.39
CAPRIN1-210ENST00000531668 BCL9LQ86UU0 1499 aa23.72■■□□□ 1.39
CAPRIN1-210ENST00000531668 PHRF1Q9P1Y6 1649 aaKnown RBP23.72■■□□□ 1.39
CAPRIN1-210ENST00000531668 MON2Q7Z3U7 1717 aa23.72■■□□□ 1.39
CAPRIN1-210ENST00000531668 CRYBG1Q9Y4K1 1723 aa23.71■■□□□ 1.39
CAPRIN1-210ENST00000531668 USP19O94966 1318 aa23.71■■□□□ 1.39
CAPRIN1-210ENST00000531668 PIK3C2AO00443 1686 aa23.7■■□□□ 1.39
CAPRIN1-210ENST00000531668 SLIT2O94813 1529 aa23.7■■□□□ 1.38
CAPRIN1-210ENST00000531668 PLCH1Q4KWH8 1693 aa23.69■■□□□ 1.38
CAPRIN1-210ENST00000531668 EDC4Q6P2E9 1401 aaKnown RBP23.68■■□□□ 1.38
CAPRIN1-210ENST00000531668 STRN4Q9NRL3 753 aa23.68■■□□□ 1.38
CAPRIN1-210ENST00000531668 NRKQ7Z2Y5 1582 aa23.68■■□□□ 1.38
CAPRIN1-210ENST00000531668 ANKRD36BQ8N2N9 1353 aa23.67■■□□□ 1.38
CAPRIN1-210ENST00000531668 COL14A1Q05707 1796 aaKnown RBP23.67■■□□□ 1.38
CAPRIN1-210ENST00000531668 ATRNO75882 1429 aa23.67■■□□□ 1.38
CAPRIN1-210ENST00000531668 SOCS7O14512 581 aa23.66■■□□□ 1.38
CAPRIN1-210ENST00000531668 EVA1CP58658 441 aa23.66■■□□□ 1.38
CAPRIN1-210ENST00000531668 GJD4Q96KN9 370 aaPredicted RBP23.66■■□□□ 1.38
CAPRIN1-210ENST00000531668 KCNH5Q8NCM2 988 aa23.64■■□□□ 1.37
CAPRIN1-210ENST00000531668 C11orf95C9JLR9 678 aaPredicted RBP23.63■■□□□ 1.37
CAPRIN1-210ENST00000531668 NWD2Q9ULI1 1742 aa23.62■■□□□ 1.37
CAPRIN1-210ENST00000531668 A0A0G2JS52 829 aa23.62■■□□□ 1.37
CAPRIN1-210ENST00000531668 MYT1Q01538 1121 aa23.62■■□□□ 1.37
CAPRIN1-210ENST00000531668 VPS72Q15906 364 aa23.62■■□□□ 1.37
CAPRIN1-210ENST00000531668 SLIT3O75094 1523 aa23.61■■□□□ 1.37
CAPRIN1-210ENST00000531668 COG3Q96JB2 828 aa23.61■■□□□ 1.37
CAPRIN1-210ENST00000531668 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.61■■□□□ 1.37
CAPRIN1-210ENST00000531668 CPDO75976 1380 aa23.6■■□□□ 1.37
CAPRIN1-210ENST00000531668 MYOM1P52179 1685 aa23.6■■□□□ 1.37
CAPRIN1-210ENST00000531668 GGNBP2Q9H3C7 697 aa23.59■■□□□ 1.37
CAPRIN1-210ENST00000531668 USP35Q9P2H5 1018 aa23.59■■□□□ 1.37
CAPRIN1-210ENST00000531668 USP31Q70CQ4 1352 aa23.59■■□□□ 1.37
CAPRIN1-210ENST00000531668 RGS12O14924 1447 aa23.59■■□□□ 1.37
CAPRIN1-210ENST00000531668 CARD14Q9BXL6 1004 aa23.58■■□□□ 1.37
CAPRIN1-210ENST00000531668 NSD3Q9BZ95 1437 aa23.57■■□□□ 1.36
CAPRIN1-210ENST00000531668 NRAPQ86VF7 1730 aa23.56■■□□□ 1.36
CAPRIN1-210ENST00000531668 ARHGEF25Q86VW2 580 aa23.56■■□□□ 1.36
CAPRIN1-210ENST00000531668 CAMTA1Q9Y6Y1 1673 aa23.55■■□□□ 1.36
CAPRIN1-210ENST00000531668 FYB1O15117 783 aa23.55■■□□□ 1.36
CAPRIN1-210ENST00000531668 FAM98CQ17RN3 349 aaKnown RBP23.55■■□□□ 1.36
CAPRIN1-210ENST00000531668 PANK3Q9H999 370 aa23.55■■□□□ 1.36
CAPRIN1-210ENST00000531668 CDK12Q9NYV4 1490 aaPredicted RBP23.55■■□□□ 1.36
CAPRIN1-210ENST00000531668 GLI3P10071 1580 aa23.54■■□□□ 1.36
CAPRIN1-210ENST00000531668 LARP1Q6PKG0 1096 aaKnown RBP23.54■■□□□ 1.36
CAPRIN1-210ENST00000531668 KIF7Q2M1P5 1343 aa23.54■■□□□ 1.36
CAPRIN1-210ENST00000531668 AATKQ6ZMQ8 1374 aa23.53■■□□□ 1.36
CAPRIN1-210ENST00000531668 CSB-PGBD3P0DP91 1061 aa23.53■■□□□ 1.36
CAPRIN1-210ENST00000531668 FBLN1P23142 703 aa23.53■■□□□ 1.36
CAPRIN1-210ENST00000531668 SPATA31A5Q5VU36 1347 aa23.53■■□□□ 1.36
CAPRIN1-210ENST00000531668 SPATA31A7Q8IWB4 1347 aa23.53■■□□□ 1.36
CAPRIN1-210ENST00000531668 SEPT12Q8IYM1 358 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms