RNA–Protein interactions for RNA: ENST00000531657.1

PPFIA1-219, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 2

Gene PPFIA1, Length 3,036 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-219ENST00000531657 AMPHP49418 695 aa12.19□□□□□ -0.46
PPFIA1-219ENST00000531657 ZKSCAN2Q63HK3 967 aa12.19□□□□□ -0.46
PPFIA1-219ENST00000531657 NKTRP30414 1462 aaKnown RBP12.19□□□□□ -0.46
PPFIA1-219ENST00000531657 ANKRD36BQ8N2N9 1353 aa12.19□□□□□ -0.46
PPFIA1-219ENST00000531657 NLRP6P59044 892 aa12.19□□□□□ -0.46
PPFIA1-219ENST00000531657 EID1Q9Y6B2 187 aa12.19□□□□□ -0.46
PPFIA1-219ENST00000531657 RIMS2Q9UQ26 1411 aa12.19□□□□□ -0.46
PPFIA1-219ENST00000531657 MLH3Q9UHC1 1453 aa12.19□□□□□ -0.46
PPFIA1-219ENST00000531657 MAP3K4Q9Y6R4 1608 aa12.19□□□□□ -0.46
PPFIA1-219ENST00000531657 CCDC61Q9Y6R9 512 aa12.18□□□□□ -0.46
PPFIA1-219ENST00000531657 HECW2Q9P2P5 1572 aa12.18□□□□□ -0.46
PPFIA1-219ENST00000531657 ACEP12821 1306 aa12.18□□□□□ -0.46
PPFIA1-219ENST00000531657 TPRNQ4KMQ1 711 aa12.17□□□□□ -0.46
PPFIA1-219ENST00000531657 ZMYM4Q5VZL5 1548 aa12.17□□□□□ -0.46
PPFIA1-219ENST00000531657 FAM161AQ3B820 660 aa12.16□□□□□ -0.46
PPFIA1-219ENST00000531657 C8orf58Q8NAV2 365 aa12.16□□□□□ -0.46
PPFIA1-219ENST00000531657 PRR36Q9H6K5 1346 aa12.16□□□□□ -0.46
PPFIA1-219ENST00000531657 ANKRD45Q5TZF3 282 aa12.16□□□□□ -0.46
PPFIA1-219ENST00000531657 PPIP5K1Q6PFW1 1433 aa12.15□□□□□ -0.46
PPFIA1-219ENST00000531657 F6X3S4 739 aa12.15□□□□□ -0.46
PPFIA1-219ENST00000531657 DDX17Q92841 729 aaKnown RBP12.15□□□□□ -0.46
PPFIA1-219ENST00000531657 POLR1AO95602 1720 aaPredicted RBP12.15□□□□□ -0.46
PPFIA1-219ENST00000531657 KIF1BO60333 1816 aa12.15□□□□□ -0.46
PPFIA1-219ENST00000531657 POLR3AO14802 1390 aaPredicted RBP12.14□□□□□ -0.47
PPFIA1-219ENST00000531657 KCNA6P17658 529 aa12.14□□□□□ -0.47
PPFIA1-219ENST00000531657 C8orf34Q49A92 452 aa12.14□□□□□ -0.47
PPFIA1-219ENST00000531657 ABTB2Q8N961 1025 aa12.14□□□□□ -0.47
PPFIA1-219ENST00000531657 ESCO1Q5FWF5 840 aa12.13□□□□□ -0.47
PPFIA1-219ENST00000531657 KDM5AP29375 1690 aaKnown RBP12.13□□□□□ -0.47
PPFIA1-219ENST00000531657 SYNMO15061 1565 aa12.13□□□□□ -0.47
PPFIA1-219ENST00000531657 EIF2S2P20042 333 aaKnown RBP12.13□□□□□ -0.47
PPFIA1-219ENST00000531657 MBIPQ9NS73 344 aa12.13□□□□□ -0.47
PPFIA1-219ENST00000531657 TULP4Q9NRJ4 1543 aa12.13□□□□□ -0.47
PPFIA1-219ENST00000531657 DIP2CQ9Y2E4 1556 aa12.12□□□□□ -0.47
PPFIA1-219ENST00000531657 TWISTNBQ3B726 338 aaPredicted RBP12.12□□□□□ -0.47
PPFIA1-219ENST00000531657 KDM2BQ8NHM5 1336 aa12.12□□□□□ -0.47
PPFIA1-219ENST00000531657 MYOM2P54296 1465 aa12.12□□□□□ -0.47
PPFIA1-219ENST00000531657 ANXA1P04083 346 aa12.12□□□□□ -0.47
PPFIA1-219ENST00000531657 MVPQ14764 893 aaKnown RBP12.12□□□□□ -0.47
PPFIA1-219ENST00000531657 ATF7IPQ6VMQ6 1270 aa12.12□□□□□ -0.47
PPFIA1-219ENST00000531657 ROBO2Q9HCK4 1378 aa12.12□□□□□ -0.47
PPFIA1-219ENST00000531657 ADGRB3O60242 1522 aa12.12□□□□□ -0.47
PPFIA1-219ENST00000531657 TSHZ3Q63HK5 1081 aa12.11□□□□□ -0.47
PPFIA1-219ENST00000531657 TRMT2AQ8IZ69 625 aaKnown RBP12.11□□□□□ -0.47
PPFIA1-219ENST00000531657 PLEKHF1Q96S99 279 aa12.11□□□□□ -0.47
PPFIA1-219ENST00000531657 GZF1Q9H116 711 aaPredicted RBP12.11□□□□□ -0.47
PPFIA1-219ENST00000531657 RWDD1Q9H446 243 aaPredicted RBP12.11□□□□□ -0.47
PPFIA1-219ENST00000531657 A0A0G2JS52 829 aa12.11□□□□□ -0.47
PPFIA1-219ENST00000531657 HDGFP51858 240 aaKnown RBP12.11□□□□□ -0.47
PPFIA1-219ENST00000531657 EIF4A2Q14240 407 aaKnown RBP12.11□□□□□ -0.47
PPFIA1-219ENST00000531657 WDR63Q8IWG1 891 aa12.11□□□□□ -0.47
PPFIA1-219ENST00000531657 RSPH6AQ9H0K4 717 aa12.11□□□□□ -0.47
PPFIA1-219ENST00000531657 TNRQ92752 1358 aa12.11□□□□□ -0.47
PPFIA1-219ENST00000531657 NEO1Q92859 1461 aa12.11□□□□□ -0.47
PPFIA1-219ENST00000531657 RTF1Q92541 710 aaKnown RBP12.1□□□□□ -0.47
PPFIA1-219ENST00000531657 GLI2P10070 1586 aa12.1□□□□□ -0.47
PPFIA1-219ENST00000531657 SIGLEC1Q9BZZ2 1709 aa12.1□□□□□ -0.47
PPFIA1-219ENST00000531657 SMARCA5O60264 1052 aaPredicted RBP12.1□□□□□ -0.47
PPFIA1-219ENST00000531657 INSRP06213 1382 aa12.1□□□□□ -0.47
PPFIA1-219ENST00000531657 IQGAP1P46940 1657 aa12.1□□□□□ -0.47
PPFIA1-219ENST00000531657 PDE3AQ14432 1141 aa12.09□□□□□ -0.47
PPFIA1-219ENST00000531657 NGEFQ8N5V2 710 aa12.09□□□□□ -0.47
PPFIA1-219ENST00000531657 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.09□□□□□ -0.47
PPFIA1-219ENST00000531657 FRAT2O75474 233 aaPredicted RBP12.09□□□□□ -0.47
PPFIA1-219ENST00000531657 NFE2L2Q16236 605 aa12.09□□□□□ -0.47
PPFIA1-219ENST00000531657 ARAP3Q8WWN8 1544 aa12.09□□□□□ -0.47
PPFIA1-219ENST00000531657 ADGRB1O14514 1584 aa12.09□□□□□ -0.47
PPFIA1-219ENST00000531657 UPF2Q9HAU5 1272 aaKnown RBP12.08□□□□□ -0.47
PPFIA1-219ENST00000531657 VWDEQ8N2E2 1590 aa12.08□□□□□ -0.48
PPFIA1-219ENST00000531657 ZC3H6P61129 1189 aaKnown RBP12.08□□□□□ -0.48
PPFIA1-219ENST00000531657 NOL8Q76FK4 1167 aaKnown RBP12.08□□□□□ -0.48
PPFIA1-219ENST00000531657 C16orf71Q8IYS4 520 aaPredicted RBP12.08□□□□□ -0.48
PPFIA1-219ENST00000531657 LRRC59Q96AG4 307 aaKnown RBP12.08□□□□□ -0.48
PPFIA1-219ENST00000531657 ABCC11Q96J66 1382 aa12.08□□□□□ -0.48
PPFIA1-219ENST00000531657 FCHSD2O94868 740 aa12.08□□□□□ -0.48
PPFIA1-219ENST00000531657 PRKCSHP14314 528 aaPredicted RBP12.08□□□□□ -0.48
PPFIA1-219ENST00000531657 TSPYL4Q9UJ04 414 aa12.08□□□□□ -0.48
PPFIA1-219ENST00000531657 DTNBO60941 627 aa12.07□□□□□ -0.48
PPFIA1-219ENST00000531657 SLC4A2P04920 1241 aa12.07□□□□□ -0.48
PPFIA1-219ENST00000531657 RIMBP3CA6NJZ7 1639 aa12.07□□□□□ -0.48
PPFIA1-219ENST00000531657 RIMBP3BA6NNM3 1639 aa12.07□□□□□ -0.48
PPFIA1-219ENST00000531657 CAMSAP1Q5T5Y3 1602 aa12.07□□□□□ -0.48
PPFIA1-219ENST00000531657 RIMBP3Q9UFD9 1639 aa12.07□□□□□ -0.48
PPFIA1-219ENST00000531657 TTC21BQ7Z4L5 1316 aa12.07□□□□□ -0.48
PPFIA1-219ENST00000531657 MS4A1P11836 297 aa12.07□□□□□ -0.48
PPFIA1-219ENST00000531657 IL13P35225 146 aa12.07□□□□□ -0.48
PPFIA1-219ENST00000531657 PSME1Q06323 249 aa12.07□□□□□ -0.48
PPFIA1-219ENST00000531657 DEPDC5O75140 1603 aa12.06□□□□□ -0.48
PPFIA1-219ENST00000531657 QRICH2Q9H0J4 1663 aa12.06□□□□□ -0.48
PPFIA1-219ENST00000531657 NEXMIFQ5QGS0 1516 aa12.06□□□□□ -0.48
PPFIA1-219ENST00000531657 HSP90AA1P07900 732 aaKnown RBP12.06□□□□□ -0.48
PPFIA1-219ENST00000531657 HSPA2P54652 639 aa12.05□□□□□ -0.48
PPFIA1-219ENST00000531657 CABLES1Q8TDN4 633 aa12.05□□□□□ -0.48
PPFIA1-219ENST00000531657 PIK3C2BO00750 1634 aa12.05□□□□□ -0.48
PPFIA1-219ENST00000531657 PIP4K2AP48426 406 aaPredicted RBP12.05□□□□□ -0.48
PPFIA1-219ENST00000531657 G2E3Q7L622 706 aa12.05□□□□□ -0.48
PPFIA1-219ENST00000531657 ORAI2Q96SN7 254 aa12.05□□□□□ -0.48
PPFIA1-219ENST00000531657 CCDC9Q9Y3X0 531 aaKnown RBP12.05□□□□□ -0.48
PPFIA1-219ENST00000531657 MAP3K19Q56UN5 1328 aa12.05□□□□□ -0.48
PPFIA1-219ENST00000531657 NPC1L1Q9UHC9 1359 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms