RNA–Protein interactions for RNA: ENST00000531201.5

IFT46-208, Transcript of intraflagellar transport 46, humanhuman

TSL 2

Gene IFT46, Length 1,496 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46-208ENST00000531201 PDE3AQ14432 1141 aa12.27□□□□□ -0.44
IFT46-208ENST00000531201 NUTM2DQ5VT03 806 aaPredicted RBP12.27□□□□□ -0.44
IFT46-208ENST00000531201 CABP2Q9NPB3 220 aa12.27□□□□□ -0.44
IFT46-208ENST00000531201 NOP58Q9Y2X3 529 aaKnown RBP12.27□□□□□ -0.44
IFT46-208ENST00000531201 BACH2Q9BYV9 841 aa12.27□□□□□ -0.45
IFT46-208ENST00000531201 VIRMAQ69YN4 1812 aaKnown RBP12.26□□□□□ -0.45
IFT46-208ENST00000531201 PDE4AP27815 886 aa12.26□□□□□ -0.45
IFT46-208ENST00000531201 AAMPQ13685 434 aa12.26□□□□□ -0.45
IFT46-208ENST00000531201 FBXO31Q5XUX0 539 aaPredicted RBP12.26□□□□□ -0.45
IFT46-208ENST00000531201 IPO9Q96P70 1041 aaKnown RBP12.26□□□□□ -0.45
IFT46-208ENST00000531201 PRAM1Q96QH2 718 aa12.26□□□□□ -0.45
IFT46-208ENST00000531201 CPS1P31327 1500 aa12.26□□□□□ -0.45
IFT46-208ENST00000531201 TECPR2O15040 1411 aa12.25□□□□□ -0.45
IFT46-208ENST00000531201 SRPK2P78362 688 aaKnown RBP12.25□□□□□ -0.45
IFT46-208ENST00000531201 TCP11L2Q8N4U5 519 aa12.25□□□□□ -0.45
IFT46-208ENST00000531201 POGKQ9P215 609 aa12.25□□□□□ -0.45
IFT46-208ENST00000531201 MON2Q7Z3U7 1717 aa12.24□□□□□ -0.45
IFT46-208ENST00000531201 STK26Q9P289 416 aa12.24□□□□□ -0.45
IFT46-208ENST00000531201 PNPLA6Q8IY17 1366 aa12.24□□□□□ -0.45
IFT46-208ENST00000531201 FAM135BQ49AJ0 1406 aa12.24□□□□□ -0.45
IFT46-208ENST00000531201 CT47B1P0C2W7 299 aaPredicted RBP12.23□□□□□ -0.45
IFT46-208ENST00000531201 HDGFL2Q7Z4V5 671 aaPredicted RBP12.23□□□□□ -0.45
IFT46-208ENST00000531201 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.23□□□□□ -0.45
IFT46-208ENST00000531201 STAG3Q9UJ98 1225 aa12.23□□□□□ -0.45
IFT46-208ENST00000531201 UBR1Q8IWV7 1749 aa12.23□□□□□ -0.45
IFT46-208ENST00000531201 AKAP12Q02952 1782 aa12.23□□□□□ -0.45
IFT46-208ENST00000531201 TNNT2P45379 298 aaPredicted RBP12.22□□□□□ -0.45
IFT46-208ENST00000531201 MINK1Q8N4C8 1332 aaPredicted RBP12.22□□□□□ -0.45
IFT46-208ENST00000531201 SIRT1Q96EB6 747 aa12.21□□□□□ -0.45
IFT46-208ENST00000531201 MYH16Q9H6N6 1097 aa12.21□□□□□ -0.45
IFT46-208ENST00000531201 ITSN1Q15811 1721 aa12.21□□□□□ -0.45
IFT46-208ENST00000531201 FYB1O15117 783 aa12.21□□□□□ -0.46
IFT46-208ENST00000531201 BCAR3O75815 825 aa12.21□□□□□ -0.46
IFT46-208ENST00000531201 SAFB2Q14151 953 aaKnown RBP eCLIP12.21□□□□□ -0.46
IFT46-208ENST00000531201 CDK19Q9BWU1 502 aa12.21□□□□□ -0.46
IFT46-208ENST00000531201 EDC4Q6P2E9 1401 aaKnown RBP12.2□□□□□ -0.46
IFT46-208ENST00000531201 IL16Q14005 1332 aa12.2□□□□□ -0.46
IFT46-208ENST00000531201 ZMYM3Q14202 1370 aa12.2□□□□□ -0.46
IFT46-208ENST00000531201 U2AF1L5P0DN76 240 aaPredicted RBP12.2□□□□□ -0.46
IFT46-208ENST00000531201 U2AF1Q01081 240 aaKnown RBP eCLIP12.2□□□□□ -0.46
IFT46-208ENST00000531201 CPSF1Q10570 1443 aaKnown RBP12.2□□□□□ -0.46
IFT46-208ENST00000531201 PNNQ9H307 717 aaKnown RBP12.2□□□□□ -0.46
IFT46-208ENST00000531201 RARSP54136 660 aaKnown RBP12.19□□□□□ -0.46
IFT46-208ENST00000531201 PLEKHF1Q96S99 279 aa12.19□□□□□ -0.46
IFT46-208ENST00000531201 CDK12Q9NYV4 1490 aaPredicted RBP12.19□□□□□ -0.46
IFT46-208ENST00000531201 LRRC7Q96NW7 1537 aa12.18□□□□□ -0.46
IFT46-208ENST00000531201 SPDYE2BA6NHP3 402 aa12.18□□□□□ -0.46
IFT46-208ENST00000531201 SPDYE6P0CI01 402 aa12.18□□□□□ -0.46
IFT46-208ENST00000531201 PRKAR2AP13861 404 aaKnown RBP12.18□□□□□ -0.46
IFT46-208ENST00000531201 SPDYE2Q495Y8 402 aa12.18□□□□□ -0.46
IFT46-208ENST00000531201 GGNBP2Q9H3C7 697 aa12.18□□□□□ -0.46
IFT46-208ENST00000531201 ZBTB47Q9UFB7 747 aaPredicted RBP12.18□□□□□ -0.46
IFT46-208ENST00000531201 C3P01024 1663 aa12.18□□□□□ -0.46
IFT46-208ENST00000531201 TOPAZ1Q8N9V7 1692 aa12.18□□□□□ -0.46
IFT46-208ENST00000531201 TNRQ92752 1358 aa12.18□□□□□ -0.46
IFT46-208ENST00000531201 CLUAP1Q96AJ1 413 aa12.17□□□□□ -0.46
IFT46-208ENST00000531201 RRP7AQ9Y3A4 280 aaKnown RBP12.17□□□□□ -0.46
IFT46-208ENST00000531201 NRKQ7Z2Y5 1582 aa12.17□□□□□ -0.46
IFT46-208ENST00000531201 CANXP27824 592 aaKnown RBP12.16□□□□□ -0.46
IFT46-208ENST00000531201 HDGFP51858 240 aaKnown RBP12.16□□□□□ -0.46
IFT46-208ENST00000531201 FAM161AQ3B820 660 aa12.16□□□□□ -0.46
IFT46-208ENST00000531201 DDRGK1Q96HY6 314 aa12.16□□□□□ -0.46
IFT46-208ENST00000531201 MAPK8IP3Q9UPT6 1336 aa12.16□□□□□ -0.46
IFT46-208ENST00000531201 AATKQ6ZMQ8 1374 aa12.16□□□□□ -0.46
IFT46-208ENST00000531201 MAP2P11137 1827 aaKnown RBP12.16□□□□□ -0.46
IFT46-208ENST00000531201 C19orf67A6NJJ6 358 aa12.15□□□□□ -0.46
IFT46-208ENST00000531201 DIAPH1O60610 1272 aaKnown RBP12.15□□□□□ -0.46
IFT46-208ENST00000531201 PAK3O75914 559 aaPredicted RBP12.15□□□□□ -0.46
IFT46-208ENST00000531201 TMPOP42166 694 aaKnown RBP12.15□□□□□ -0.46
IFT46-208ENST00000531201 PPIP5K1Q6PFW1 1433 aa12.15□□□□□ -0.46
IFT46-208ENST00000531201 NEUROD2Q15784 382 aa12.14□□□□□ -0.47
IFT46-208ENST00000531201 LHX8Q68G74 356 aa12.14□□□□□ -0.47
IFT46-208ENST00000531201 CABP1Q9NZU7 370 aa12.14□□□□□ -0.47
IFT46-208ENST00000531201 METP08581 1390 aa12.14□□□□□ -0.47
IFT46-208ENST00000531201 TMEM2Q9UHN6 1383 aa12.14□□□□□ -0.47
IFT46-208ENST00000531201 WASLO00401 505 aaPredicted RBP12.14□□□□□ -0.47
IFT46-208ENST00000531201 PMFBP1Q8TBY8 1022 aa12.14□□□□□ -0.47
IFT46-208ENST00000531201 ESF1Q9H501 851 aaKnown RBP12.14□□□□□ -0.47
IFT46-208ENST00000531201 FCHSD2O94868 740 aa12.13□□□□□ -0.47
IFT46-208ENST00000531201 NALCNQ8IZF0 1738 aa12.13□□□□□ -0.47
IFT46-208ENST00000531201 RIMS1Q86UR5 1692 aaKnown RBP12.12□□□□□ -0.47
IFT46-208ENST00000531201 ADAMTS13Q76LX8 1427 aa12.12□□□□□ -0.47
IFT46-208ENST00000531201 PLEKHG1Q9ULL1 1385 aa12.12□□□□□ -0.47
IFT46-208ENST00000531201 U2SURPO15042 1029 aaKnown RBP12.12□□□□□ -0.47
IFT46-208ENST00000531201 C8orf34Q49A92 452 aa12.12□□□□□ -0.47
IFT46-208ENST00000531201 PANK1Q8TE04 598 aa12.12□□□□□ -0.47
IFT46-208ENST00000531201 TRIM35Q9UPQ4 493 aa12.12□□□□□ -0.47
IFT46-208ENST00000531201 DIP2AQ14689 1571 aa12.11□□□□□ -0.47
IFT46-208ENST00000531201 WAPLQ7Z5K2 1190 aa12.11□□□□□ -0.47
IFT46-208ENST00000531201 COG6Q9Y2V7 657 aa12.11□□□□□ -0.47
IFT46-208ENST00000531201 SLIT1O75093 1534 aa12.11□□□□□ -0.47
IFT46-208ENST00000531201 GABBR2O75899 941 aa12.1□□□□□ -0.47
IFT46-208ENST00000531201 MLECQ14165 292 aa12.1□□□□□ -0.47
IFT46-208ENST00000531201 ZKSCAN2Q63HK3 967 aa12.1□□□□□ -0.47
IFT46-208ENST00000531201 SPDYE1Q8NFV5 336 aaPredicted RBP12.1□□□□□ -0.47
IFT46-208ENST00000531201 ZNF428Q96B54 188 aa12.1□□□□□ -0.47
IFT46-208ENST00000531201 ARHGAP23Q9P227 1491 aa12.1□□□□□ -0.47
IFT46-208ENST00000531201 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.09□□□□□ -0.47
IFT46-208ENST00000531201 IGHDP01880 384 aa12.09□□□□□ -0.47
IFT46-208ENST00000531201 NPM2Q86SE8 214 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms