RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 TMC1Q8TDI8 760 aa21.31■■□□□ 1
CCS-206ENST00000530961 SBNO1A3KN83 1393 aa21.3■■□□□ 1
CCS-206ENST00000530961 NINLQ9Y2I6 1382 aa21.29■■□□□ 1
CCS-206ENST00000530961 USP32Q8NFA0 1604 aa21.29■■□□□ 1
CCS-206ENST00000530961 SPATA31A3Q5VYP0 1347 aa21.29■■□□□ 1
CCS-206ENST00000530961 PXDNQ92626 1479 aa21.28■■□□□ 1
CCS-206ENST00000530961 SLC12A5Q9H2X9 1139 aa21.28■■□□□ 1
CCS-206ENST00000530961 BRD4O60885 1362 aaPredicted RBP21.27■■□□□ 1
CCS-206ENST00000530961 TERF2IPQ9NYB0 399 aa21.27■■□□□ 1
CCS-206ENST00000530961 HDGFL2Q7Z4V5 671 aaPredicted RBP21.26■□□□□ 0.99
CCS-206ENST00000530961 KIF1AQ12756 1690 aa21.25■□□□□ 0.99
CCS-206ENST00000530961 PAK3O75914 559 aaPredicted RBP21.25■□□□□ 0.99
CCS-206ENST00000530961 PNPLA6Q8IY17 1366 aa21.24■□□□□ 0.99
CCS-206ENST00000530961 YY1P25490 414 aa21.24■□□□□ 0.99
CCS-206ENST00000530961 EP400Q96L91 3159 aa21.24■□□□□ 0.99
CCS-206ENST00000530961 ARHGEF10O15013 1369 aa21.23■□□□□ 0.99
CCS-206ENST00000530961 NHSL1Q5SYE7 1610 aa21.23■□□□□ 0.99
CCS-206ENST00000530961 LMOD2Q6P5Q4 547 aa21.23■□□□□ 0.99
CCS-206ENST00000530961 CPSF1Q10570 1443 aaKnown RBP21.22■□□□□ 0.99
CCS-206ENST00000530961 TNS3Q68CZ2 1445 aa21.22■□□□□ 0.99
CCS-206ENST00000530961 TRPC5Q9UL62 973 aaPredicted RBP21.21■□□□□ 0.99
CCS-206ENST00000530961 USP6P35125 1406 aa21.21■□□□□ 0.99
CCS-206ENST00000530961 POLR3GLQ9BT43 218 aa21.2■□□□□ 0.98
CCS-206ENST00000530961 C11orf95C9JLR9 678 aaPredicted RBP21.19■□□□□ 0.98
CCS-206ENST00000530961 ABTB2Q8N961 1025 aa21.19■□□□□ 0.98
CCS-206ENST00000530961 KTN1Q86UP2 1357 aaKnown RBP21.19■□□□□ 0.98
CCS-206ENST00000530961 TTC21BQ7Z4L5 1316 aa21.18■□□□□ 0.98
CCS-206ENST00000530961 USP21Q9UK80 565 aa21.17■□□□□ 0.98
CCS-206ENST00000530961 TTC21AQ8NDW8 1320 aa21.17■□□□□ 0.98
CCS-206ENST00000530961 ANKRD36BQ8N2N9 1353 aa21.17■□□□□ 0.98
CCS-206ENST00000530961 SSH2Q76I76 1423 aa21.17■□□□□ 0.98
CCS-206ENST00000530961 TOPAZ1Q8N9V7 1692 aa21.16■□□□□ 0.98
CCS-206ENST00000530961 A0A1W2PP64 1363 aa21.16■□□□□ 0.98
CCS-206ENST00000530961 BLMP54132 1417 aaPredicted RBP21.15■□□□□ 0.98
CCS-206ENST00000530961 KIF7Q2M1P5 1343 aa21.15■□□□□ 0.98
CCS-206ENST00000530961 NLRP13Q86W25 1043 aa21.15■□□□□ 0.98
CCS-206ENST00000530961 ITSN1Q15811 1721 aa21.15■□□□□ 0.98
CCS-206ENST00000530961 CD163L1Q9NR16 1453 aa21.14■□□□□ 0.98
CCS-206ENST00000530961 HAP1P54257 671 aaPredicted RBP21.13■□□□□ 0.97
CCS-206ENST00000530961 EDC4Q6P2E9 1401 aaKnown RBP21.12■□□□□ 0.97
CCS-206ENST00000530961 ADAMTS2O95450 1211 aa21.12■□□□□ 0.97
CCS-206ENST00000530961 NLRP6P59044 892 aa21.12■□□□□ 0.97
CCS-206ENST00000530961 SF3B2Q13435 895 aaKnown RBP21.12■□□□□ 0.97
CCS-206ENST00000530961 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.12■□□□□ 0.97
CCS-206ENST00000530961 RGPD8O14715 1765 aaPredicted RBP21.11■□□□□ 0.97
CCS-206ENST00000530961 NUTM2GQ5VZR2 741 aa21.11■□□□□ 0.97
CCS-206ENST00000530961 CABLES1Q8TDN4 633 aa21.11■□□□□ 0.97
CCS-206ENST00000530961 WASHC2AQ641Q2 1341 aa21.09■□□□□ 0.97
CCS-206ENST00000530961 CCDC7Q96M83 1385 aa21.09■□□□□ 0.97
CCS-206ENST00000530961 PLEKHG5O94827 1062 aa21.08■□□□□ 0.97
CCS-206ENST00000530961 DEFB132Q7Z7B7 95 aa21.08■□□□□ 0.97
CCS-206ENST00000530961 CARD14Q9BXL6 1004 aa21.08■□□□□ 0.97
CCS-206ENST00000530961 PANK3Q9H999 370 aa21.08■□□□□ 0.97
CCS-206ENST00000530961 USP19O94966 1318 aa21.07■□□□□ 0.96
CCS-206ENST00000530961 ATRNO75882 1429 aa21.07■□□□□ 0.96
CCS-206ENST00000530961 NME9Q86XW9 330 aa21.07■□□□□ 0.96
CCS-206ENST00000530961 PSDA5PKW4 1024 aaPredicted RBP21.06■□□□□ 0.96
CCS-206ENST00000530961 USP31Q70CQ4 1352 aa21.06■□□□□ 0.96
CCS-206ENST00000530961 GCP02774 474 aa21.05■□□□□ 0.96
CCS-206ENST00000530961 KCNH5Q8NCM2 988 aa21.05■□□□□ 0.96
CCS-206ENST00000530961 TRPM3Q9HCF6 1732 aaPredicted RBP21.04■□□□□ 0.96
CCS-206ENST00000530961 FNBP4Q8N3X1 1017 aaPredicted RBP21.04■□□□□ 0.96
CCS-206ENST00000530961 FYB1O15117 783 aa21.03■□□□□ 0.96
CCS-206ENST00000530961 COL22A1Q8NFW1 1626 aaPredicted RBP21.03■□□□□ 0.96
CCS-206ENST00000530961 CGNL1Q0VF96 1302 aa21.03■□□□□ 0.96
CCS-206ENST00000530961 COG3Q96JB2 828 aa21.02■□□□□ 0.96
CCS-206ENST00000530961 NSD3Q9BZ95 1437 aa21.01■□□□□ 0.95
CCS-206ENST00000530961 PRDM11Q9NQV5 511 aa21■□□□□ 0.95
CCS-206ENST00000530961 KNSTRNQ9Y448 316 aa21■□□□□ 0.95
CCS-206ENST00000530961 FAM83GA6ND36 823 aa20.99■□□□□ 0.95
CCS-206ENST00000530961 ALS2Q96Q42 1657 aa20.99■□□□□ 0.95
CCS-206ENST00000530961 SENP3-EIF4A1A0A087X0R7 540 aa20.98■□□□□ 0.95
CCS-206ENST00000530961 ZC3H6P61129 1189 aaKnown RBP20.98■□□□□ 0.95
CCS-206ENST00000530961 GGNBP2Q9H3C7 697 aa20.98■□□□□ 0.95
CCS-206ENST00000530961 BCL9LQ86UU0 1499 aa20.98■□□□□ 0.95
CCS-206ENST00000530961 CPDO75976 1380 aa20.97■□□□□ 0.95
CCS-206ENST00000530961 KIAA0232Q92628 1395 aa20.97■□□□□ 0.95
CCS-206ENST00000530961 PER1O15534 1290 aaPredicted RBP20.95■□□□□ 0.94
CCS-206ENST00000530961 ARHGEF25Q86VW2 580 aa20.95■□□□□ 0.94
CCS-206ENST00000530961 GJD4Q96KN9 370 aaPredicted RBP20.95■□□□□ 0.94
CCS-206ENST00000530961 OVOS2A0A0J9YW53 1432 aa20.95■□□□□ 0.94
CCS-206ENST00000530961 OVOS2Q6IE36 1432 aa20.95■□□□□ 0.94
CCS-206ENST00000530961 DCAF8L1A6NGE4 600 aa20.94■□□□□ 0.94
CCS-206ENST00000530961 SOX12O15370 315 aa20.94■□□□□ 0.94
CCS-206ENST00000530961 NRKQ7Z2Y5 1582 aa20.93■□□□□ 0.94
CCS-206ENST00000530961 AKAP12Q02952 1782 aa20.93■□□□□ 0.94
CCS-206ENST00000530961 UNC5CLQ8IV45 518 aa20.93■□□□□ 0.94
CCS-206ENST00000530961 SLIT3O75094 1523 aa20.93■□□□□ 0.94
CCS-206ENST00000530961 MON2Q7Z3U7 1717 aa20.92■□□□□ 0.94
CCS-206ENST00000530961 CHRNA2Q15822 529 aa20.92■□□□□ 0.94
CCS-206ENST00000530961 NSD2O96028 1365 aa20.92■□□□□ 0.94
CCS-206ENST00000530961 BAG6P46379 1132 aa20.91■□□□□ 0.94
CCS-206ENST00000530961 AMER1Q5JTC6 1135 aaPredicted RBP20.91■□□□□ 0.94
CCS-206ENST00000530961 AATKQ6ZMQ8 1374 aa20.91■□□□□ 0.94
CCS-206ENST00000530961 BTG4Q9NY30 223 aa20.91■□□□□ 0.94
CCS-206ENST00000530961 MYOM1P52179 1685 aa20.9■□□□□ 0.94
CCS-206ENST00000530961 SLIT2O94813 1529 aa20.9■□□□□ 0.94
CCS-206ENST00000530961 PIK3C2AO00443 1686 aa20.89■□□□□ 0.94
CCS-206ENST00000530961 ZBTB7CA1YPR0 619 aa20.89■□□□□ 0.93
CCS-206ENST00000530961 ZNF316A6NFI3 1004 aaPredicted RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms