RNA–Protein interactions for RNA: ENST00000530565.5

CTSF-208, Transcript of cathepsin F, humanhuman

TSL 5

Gene CTSF, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-208ENST00000530565 CABLES1Q8TDN4 633 aa12.12□□□□□ -0.47
CTSF-208ENST00000530565 SBNO1A3KN83 1393 aa12.11□□□□□ -0.47
CTSF-208ENST00000530565 CRYBG1Q9Y4K1 1723 aa12.11□□□□□ -0.47
CTSF-208ENST00000530565 KRT27Q7Z3Y8 459 aa12.1□□□□□ -0.47
CTSF-208ENST00000530565 HIRIP3Q9BW71 556 aaPredicted RBP12.1□□□□□ -0.47
CTSF-208ENST00000530565 RGPD1P0DJD0 1748 aa12.1□□□□□ -0.47
CTSF-208ENST00000530565 TNS1Q9HBL0 1735 aaKnown RBP12.1□□□□□ -0.47
CTSF-208ENST00000530565 ALS2Q96Q42 1657 aa12.1□□□□□ -0.47
CTSF-208ENST00000530565 USP47Q96K76 1375 aa12.09□□□□□ -0.47
CTSF-208ENST00000530565 PHF8Q9UPP1 1060 aa12.09□□□□□ -0.47
CTSF-208ENST00000530565 SBNO2Q9Y2G9 1366 aa12.08□□□□□ -0.48
CTSF-208ENST00000530565 COL14A1Q05707 1796 aaKnown RBP12.08□□□□□ -0.48
CTSF-208ENST00000530565 THSD7AQ9UPZ6 1657 aa12.08□□□□□ -0.48
CTSF-208ENST00000530565 WASLO00401 505 aaPredicted RBP12.08□□□□□ -0.48
CTSF-208ENST00000530565 SF3B2Q13435 895 aaKnown RBP12.08□□□□□ -0.48
CTSF-208ENST00000530565 ARHGEF10O15013 1369 aa12.07□□□□□ -0.48
CTSF-208ENST00000530565 ST20-MTHFSA0A0A6YYL1 179 aa12.07□□□□□ -0.48
CTSF-208ENST00000530565 PSDA5PKW4 1024 aaPredicted RBP12.07□□□□□ -0.48
CTSF-208ENST00000530565 FAM83GA6ND36 823 aa12.07□□□□□ -0.48
CTSF-208ENST00000530565 TULP4Q9NRJ4 1543 aa12.06□□□□□ -0.48
CTSF-208ENST00000530565 ANKARQ7Z5J8 1434 aa12.06□□□□□ -0.48
CTSF-208ENST00000530565 PSME1Q06323 249 aa12.06□□□□□ -0.48
CTSF-208ENST00000530565 CDK19Q9BWU1 502 aa12.06□□□□□ -0.48
CTSF-208ENST00000530565 PLEKHG5O94827 1062 aa12.05□□□□□ -0.48
CTSF-208ENST00000530565 HAP1P54257 671 aaPredicted RBP12.05□□□□□ -0.48
CTSF-208ENST00000530565 TESK2Q96S53 571 aa12.05□□□□□ -0.48
CTSF-208ENST00000530565 CCDC9Q9Y3X0 531 aaKnown RBP12.05□□□□□ -0.48
CTSF-208ENST00000530565 EVC2Q86UK5 1308 aa12.05□□□□□ -0.48
CTSF-208ENST00000530565 DISP2A7MBM2 1401 aa12.04□□□□□ -0.48
CTSF-208ENST00000530565 BAG6P46379 1132 aa12.04□□□□□ -0.48
CTSF-208ENST00000530565 EIF4G2P78344 907 aaKnown RBP eCLIP12.04□□□□□ -0.48
CTSF-208ENST00000530565 FAM98CQ17RN3 349 aaKnown RBP12.04□□□□□ -0.48
CTSF-208ENST00000530565 PRR36Q9H6K5 1346 aa12.04□□□□□ -0.48
CTSF-208ENST00000530565 ATP7BP35670 1465 aa12.03□□□□□ -0.48
CTSF-208ENST00000530565 SRPK2P78362 688 aaKnown RBP12.03□□□□□ -0.48
CTSF-208ENST00000530565 EN1Q05925 392 aaPredicted RBP12.03□□□□□ -0.48
CTSF-208ENST00000530565 PMFBP1Q8TBY8 1022 aa12.03□□□□□ -0.48
CTSF-208ENST00000530565 CABP2Q9NPB3 220 aa12.03□□□□□ -0.48
CTSF-208ENST00000530565 BTG4Q9NY30 223 aa12.03□□□□□ -0.48
CTSF-208ENST00000530565 ITSN1Q15811 1721 aa12.03□□□□□ -0.48
CTSF-208ENST00000530565 SLC24A1O60721 1099 aa12.02□□□□□ -0.49
CTSF-208ENST00000530565 HSPA5P11021 654 aaKnown RBP12.02□□□□□ -0.49
CTSF-208ENST00000530565 FAM182BQ5T319 152 aa12.02□□□□□ -0.49
CTSF-208ENST00000530565 LMOD2Q6P5Q4 547 aa12.02□□□□□ -0.49
CTSF-208ENST00000530565 NUDT16Q96DE0 195 aaKnown RBP12.02□□□□□ -0.49
CTSF-208ENST00000530565 TOPAZ1Q8N9V7 1692 aa12.02□□□□□ -0.49
CTSF-208ENST00000530565 RREB1Q92766 1687 aa12.01□□□□□ -0.49
CTSF-208ENST00000530565 SPATA31A5Q5VU36 1347 aa12.01□□□□□ -0.49
CTSF-208ENST00000530565 SPATA31A7Q8IWB4 1347 aa12.01□□□□□ -0.49
CTSF-208ENST00000530565 PHRF1Q9P1Y6 1649 aaKnown RBP12□□□□□ -0.49
CTSF-208ENST00000530565 CCDC61Q9Y6R9 512 aa12□□□□□ -0.49
CTSF-208ENST00000530565 A0A0G2JS52 829 aa11.99□□□□□ -0.49
CTSF-208ENST00000530565 TMF1P82094 1093 aa11.99□□□□□ -0.49
CTSF-208ENST00000530565 MYT1Q01538 1121 aa11.99□□□□□ -0.49
CTSF-208ENST00000530565 R3HDM1Q15032 1099 aaKnown RBP11.99□□□□□ -0.49
CTSF-208ENST00000530565 NUP188Q5SRE5 1749 aa11.99□□□□□ -0.49
CTSF-208ENST00000530565 PPIP5K1Q6PFW1 1433 aa11.98□□□□□ -0.49
CTSF-208ENST00000530565 EZH2Q15910 746 aaKnown RBP11.98□□□□□ -0.49
CTSF-208ENST00000530565 PUS7Q96PZ0 661 aaKnown RBP11.98□□□□□ -0.49
CTSF-208ENST00000530565 PLEKHG3A1L390 1219 aa11.97□□□□□ -0.49
CTSF-208ENST00000530565 CAMKK2Q96RR4 588 aa11.97□□□□□ -0.49
CTSF-208ENST00000530565 SPATA31A1Q5TZJ5 1347 aa11.96□□□□□ -0.49
CTSF-208ENST00000530565 CDCA8Q53HL2 280 aa11.96□□□□□ -0.49
CTSF-208ENST00000530565 POLR3AO14802 1390 aaPredicted RBP11.95□□□□□ -0.5
CTSF-208ENST00000530565 NGDNQ8NEJ9 315 aaKnown RBP11.95□□□□□ -0.5
CTSF-208ENST00000530565 CABP1Q9NZU7 370 aa11.95□□□□□ -0.5
CTSF-208ENST00000530565 KIAA0232Q92628 1395 aa11.94□□□□□ -0.5
CTSF-208ENST00000530565 ACEP12821 1306 aa11.94□□□□□ -0.5
CTSF-208ENST00000530565 LMO7Q8WWI1 1683 aa11.94□□□□□ -0.5
CTSF-208ENST00000530565 PARD3Q8TEW0 1356 aa11.93□□□□□ -0.5
CTSF-208ENST00000530565 NRKQ7Z2Y5 1582 aa11.93□□□□□ -0.5
CTSF-208ENST00000530565 TRIM37O94972 964 aa11.93□□□□□ -0.5
CTSF-208ENST00000530565 TMC1Q8TDI8 760 aa11.93□□□□□ -0.5
CTSF-208ENST00000530565 PRDM11Q9NQV5 511 aa11.93□□□□□ -0.5
CTSF-208ENST00000530565 NINLQ9Y2I6 1382 aa11.92□□□□□ -0.5
CTSF-208ENST00000530565 AKAP12Q02952 1782 aa11.92□□□□□ -0.5
CTSF-208ENST00000530565 SLC12A5Q9H2X9 1139 aa11.92□□□□□ -0.5
CTSF-208ENST00000530565 MYOM1P52179 1685 aa11.91□□□□□ -0.5
CTSF-208ENST00000530565 CAMTA1Q9Y6Y1 1673 aa11.91□□□□□ -0.5
CTSF-208ENST00000530565 C11orf95C9JLR9 678 aaPredicted RBP11.91□□□□□ -0.5
CTSF-208ENST00000530565 CHRNA2Q15822 529 aa11.91□□□□□ -0.5
CTSF-208ENST00000530565 FAM196AQ6ZSG2 479 aa11.91□□□□□ -0.5
CTSF-208ENST00000530565 CPSF1Q10570 1443 aaKnown RBP11.91□□□□□ -0.5
CTSF-208ENST00000530565 PARP4Q9UKK3 1724 aaKnown RBP11.91□□□□□ -0.5
CTSF-208ENST00000530565 CD163L1Q9NR16 1453 aa11.9□□□□□ -0.5
CTSF-208ENST00000530565 USP6P35125 1406 aa11.9□□□□□ -0.5
CTSF-208ENST00000530565 SSH2Q76I76 1423 aa11.9□□□□□ -0.5
CTSF-208ENST00000530565 MON2Q7Z3U7 1717 aa11.9□□□□□ -0.5
CTSF-208ENST00000530565 POLR3GLQ9BT43 218 aa11.9□□□□□ -0.5
CTSF-208ENST00000530565 ZNF692Q9BU19 519 aaPredicted RBP11.9□□□□□ -0.5
CTSF-208ENST00000530565 PEAK1Q9H792 1746 aa11.9□□□□□ -0.5
CTSF-208ENST00000530565 PAK3O75914 559 aaPredicted RBP11.89□□□□□ -0.51
CTSF-208ENST00000530565 APBA3O96018 575 aa11.89□□□□□ -0.51
CTSF-208ENST00000530565 BARGINQ6ZT62 677 aa11.89□□□□□ -0.51
CTSF-208ENST00000530565 HDGFL2Q7Z4V5 671 aaPredicted RBP11.89□□□□□ -0.51
CTSF-208ENST00000530565 TERF2IPQ9NYB0 399 aa11.89□□□□□ -0.51
CTSF-208ENST00000530565 BRD4O60885 1362 aaPredicted RBP11.89□□□□□ -0.51
CTSF-208ENST00000530565 KTN1Q86UP2 1357 aaKnown RBP11.89□□□□□ -0.51
CTSF-208ENST00000530565 KIF7Q2M1P5 1343 aa11.88□□□□□ -0.51
CTSF-208ENST00000530565 RGPD3A6NKT7 1758 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms