RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 ZBTB3Q9H5J0 574 aa7.43□□□□□ -1.22
NUP98-218ENST00000530516 SPTLC1O15269 473 aa7.42□□□□□ -1.22
NUP98-218ENST00000530516 LYPD8Q6UX82 237 aa7.42□□□□□ -1.22
NUP98-218ENST00000530516 FAM174AQ8TBP5 190 aa7.42□□□□□ -1.22
NUP98-218ENST00000530516 BAP1Q92560 729 aa7.42□□□□□ -1.22
NUP98-218ENST00000530516 AK7Q96M32 723 aa7.41□□□□□ -1.22
NUP98-218ENST00000530516 NXF1Q9UBU9 619 aaKnown RBP7.41□□□□□ -1.22
NUP98-218ENST00000530516 FAM181BA6NEQ2 426 aa7.4□□□□□ -1.22
NUP98-218ENST00000530516 PARP9Q8IXQ6 854 aa7.4□□□□□ -1.22
NUP98-218ENST00000530516 TUSC1Q2TAM9 212 aa7.39□□□□□ -1.23
NUP98-218ENST00000530516 LINC01559Q495D7 138 aa7.39□□□□□ -1.23
NUP98-218ENST00000530516 TRIM66O15016 1216 aa7.38□□□□□ -1.23
NUP98-218ENST00000530516 ADH1CP00326 375 aa7.38□□□□□ -1.23
NUP98-218ENST00000530516 CTHP32929 405 aa7.38□□□□□ -1.23
NUP98-218ENST00000530516 NNTQ13423 1086 aa7.38□□□□□ -1.23
NUP98-218ENST00000530516 SCARF1Q14162 830 aa7.38□□□□□ -1.23
NUP98-218ENST00000530516 TRIM46Q7Z4K8 759 aa7.38□□□□□ -1.23
NUP98-218ENST00000530516 ARMC2Q8NEN0 867 aa7.38□□□□□ -1.23
NUP98-218ENST00000530516 IRF7Q92985 503 aa7.38□□□□□ -1.23
NUP98-218ENST00000530516 SLC24A3Q9HC58 644 aa7.38□□□□□ -1.23
NUP98-218ENST00000530516 TLL2Q9Y6L7 1015 aa7.38□□□□□ -1.23
NUP98-218ENST00000530516 RIC3Q7Z5B4 369 aa7.37□□□□□ -1.23
NUP98-218ENST00000530516 CDK15Q96Q40 435 aa7.37□□□□□ -1.23
NUP98-218ENST00000530516 F12P00748 615 aaPredicted RBP7.36□□□□□ -1.23
NUP98-218ENST00000530516 BMP1P13497 986 aa7.36□□□□□ -1.23
NUP98-218ENST00000530516 HRCP23327 699 aa7.36□□□□□ -1.23
NUP98-218ENST00000530516 BPHLQ86WA6 291 aaPredicted RBP7.36□□□□□ -1.23
NUP98-218ENST00000530516 CFAP99D6REC4 459 aa7.35□□□□□ -1.23
NUP98-218ENST00000530516 NR5A1Q13285 461 aa7.35□□□□□ -1.23
NUP98-218ENST00000530516 MRPL14Q6P1L8 145 aaKnown RBP7.35□□□□□ -1.23
NUP98-218ENST00000530516 WDR4P57081 412 aaKnown RBP7.34□□□□□ -1.23
NUP98-218ENST00000530516 ZFP42Q96MM3 310 aa7.34□□□□□ -1.23
NUP98-218ENST00000530516 PCDHB15Q9Y5E8 787 aa7.34□□□□□ -1.23
NUP98-218ENST00000530516 H3BM21 787 aa7.33□□□□□ -1.24
NUP98-218ENST00000530516 TIMP2P16035 220 aa7.33□□□□□ -1.24
NUP98-218ENST00000530516 NBPF14Q5TI25 921 aa7.33□□□□□ -1.24
NUP98-218ENST00000530516 HELBQ8NG08 1087 aaPredicted RBP7.33□□□□□ -1.24
NUP98-218ENST00000530516 AGERQ15109 404 aa7.32□□□□□ -1.24
NUP98-218ENST00000530516 GPKOWQ92917 476 aaPredicted RBP eCLIP7.32□□□□□ -1.24
NUP98-218ENST00000530516 NUTM2BA6NNL0 878 aaPredicted RBP7.31□□□□□ -1.24
NUP98-218ENST00000530516 NUTM2EB1AL46 878 aaPredicted RBP7.31□□□□□ -1.24
NUP98-218ENST00000530516 UPP2O95045 317 aa7.31□□□□□ -1.24
NUP98-218ENST00000530516 LCE2CQ5TA81 110 aa7.31□□□□□ -1.24
NUP98-218ENST00000530516 NUTM2DQ5VT03 806 aaPredicted RBP7.31□□□□□ -1.24
NUP98-218ENST00000530516 MYSM1Q5VVJ2 828 aa7.31□□□□□ -1.24
NUP98-218ENST00000530516 NUTM2AQ8IVF1 878 aaPredicted RBP7.31□□□□□ -1.24
NUP98-218ENST00000530516 KLF16Q9BXK1 252 aaPredicted RBP7.31□□□□□ -1.24
NUP98-218ENST00000530516 RSPH6AQ9H0K4 717 aa7.31□□□□□ -1.24
NUP98-218ENST00000530516 MAP10Q9P2G4 905 aa7.31□□□□□ -1.24
NUP98-218ENST00000530516 MAP4K5Q9Y4K4 846 aa7.31□□□□□ -1.24
NUP98-218ENST00000530516 PDE4DQ08499 809 aa7.3□□□□□ -1.24
NUP98-218ENST00000530516 FOXJ1Q92949 421 aa7.3□□□□□ -1.24
NUP98-218ENST00000530516 LILRB3O75022 631 aa7.29□□□□□ -1.24
NUP98-218ENST00000530516 ARID5BQ14865 1188 aa7.29□□□□□ -1.24
NUP98-218ENST00000530516 TRMT44Q8IYL2 757 aaKnown RBP7.29□□□□□ -1.24
NUP98-218ENST00000530516 ZSCAN1Q8NBB4 408 aa7.29□□□□□ -1.24
NUP98-218ENST00000530516 CABLES1Q8TDN4 633 aa7.29□□□□□ -1.24
NUP98-218ENST00000530516 ZIC2O95409 532 aaPredicted RBP7.28□□□□□ -1.24
NUP98-218ENST00000530516 VSIG8P0DPA2 414 aa7.28□□□□□ -1.24
NUP98-218ENST00000530516 GMPRP36959 345 aa7.28□□□□□ -1.24
NUP98-218ENST00000530516 CSPP1Q1MSJ5 1256 aa7.28□□□□□ -1.24
NUP98-218ENST00000530516 PURBQ96QR8 312 aaKnown RBP7.28□□□□□ -1.24
NUP98-218ENST00000530516 C1QTNF2Q9BXJ5 285 aa7.28□□□□□ -1.24
NUP98-218ENST00000530516 SH3RF1Q7Z6J0 888 aa7.27□□□□□ -1.25
NUP98-218ENST00000530516 TSC1Q92574 1164 aa7.27□□□□□ -1.25
NUP98-218ENST00000530516 MAN1A2O60476 641 aa7.26□□□□□ -1.25
NUP98-218ENST00000530516 GRM5P41594 1212 aa7.26□□□□□ -1.25
NUP98-218ENST00000530516 CLK2P49760 499 aaKnown RBP7.26□□□□□ -1.25
NUP98-218ENST00000530516 TPRNQ4KMQ1 711 aa7.26□□□□□ -1.25
NUP98-218ENST00000530516 LIMD1Q9UGP4 676 aa7.26□□□□□ -1.25
NUP98-218ENST00000530516 CDV3Q9UKY7 258 aaKnown RBP7.26□□□□□ -1.25
NUP98-218ENST00000530516 PER1O15534 1290 aaPredicted RBP7.25□□□□□ -1.25
NUP98-218ENST00000530516 QPCTQ16769 361 aa7.25□□□□□ -1.25
NUP98-218ENST00000530516 C4orf48Q5BLP8 95 aa7.25□□□□□ -1.25
NUP98-218ENST00000530516 SH3BP5LQ7L8J4 393 aa7.25□□□□□ -1.25
NUP98-218ENST00000530516 MEIOBQ8N635 442 aa7.25□□□□□ -1.25
NUP98-218ENST00000530516 ITPKCQ96DU7 683 aa7.25□□□□□ -1.25
NUP98-218ENST00000530516 EMILIN1Q9Y6C2 1016 aa7.25□□□□□ -1.25
NUP98-218ENST00000530516 NR3C2P08235 984 aa7.24□□□□□ -1.25
NUP98-218ENST00000530516 VASH1Q7L8A9 365 aaPredicted RBP7.24□□□□□ -1.25
NUP98-218ENST00000530516 LINC00528Q8N1L1 170 aa7.24□□□□□ -1.25
NUP98-218ENST00000530516 TSEN34Q9BSV6 310 aaKnown RBP7.24□□□□□ -1.25
NUP98-218ENST00000530516 ZFAND3Q9H8U3 227 aa7.24□□□□□ -1.25
NUP98-218ENST00000530516 ZC3H4Q9UPT8 1303 aaKnown RBP7.24□□□□□ -1.25
NUP98-218ENST00000530516 BMP2P12643 396 aa7.23□□□□□ -1.25
NUP98-218ENST00000530516 CCDC116Q8IYX3 515 aa7.23□□□□□ -1.25
NUP98-218ENST00000530516 FSHRP23945 695 aa7.22□□□□□ -1.25
NUP98-218ENST00000530516 VEGFBP49765 207 aa7.22□□□□□ -1.25
NUP98-218ENST00000530516 PDXDC2PQ6P474 469 aa7.22□□□□□ -1.25
NUP98-218ENST00000530516 GPBP1L1Q9HC44 474 aaPredicted RBP7.22□□□□□ -1.25
NUP98-218ENST00000530516 PGPEP1Q9NXJ5 209 aa7.22□□□□□ -1.25
NUP98-218ENST00000530516 ERBB4Q15303 1308 aa7.22□□□□□ -1.25
NUP98-218ENST00000530516 DHX9Q08211 1270 aaKnown RBP7.21□□□□□ -1.26
NUP98-218ENST00000530516 C6orf118Q5T5N4 469 aa7.21□□□□□ -1.26
NUP98-218ENST00000530516 SOS2Q07890 1332 aaPredicted RBP7.21□□□□□ -1.26
NUP98-218ENST00000530516 MAGEB6P1A0A0J9YX57 407 aa7.2□□□□□ -1.26
NUP98-218ENST00000530516 PRKCSHP14314 528 aaPredicted RBP7.2□□□□□ -1.26
NUP98-218ENST00000530516 LORP23490 312 aaPredicted RBP7.2□□□□□ -1.26
NUP98-218ENST00000530516 RTL5Q5HYW3 569 aaPredicted RBP7.2□□□□□ -1.26
NUP98-218ENST00000530516 PNMA1Q8ND90 353 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms