RNA–Protein interactions for RNA: ENST00000530311.6

TRIM49D1-202, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TRIM49D1, Length 2,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-202ENST00000530311 NOB1Q9ULX3 412 aaKnown RBP11.78□□□□□ -0.52
TRIM49D1-202ENST00000530311 ABCC11Q96J66 1382 aa11.77□□□□□ -0.52
TRIM49D1-202ENST00000530311 RIPK4P57078 832 aa11.77□□□□□ -0.53
TRIM49D1-202ENST00000530311 POGKQ9P215 609 aa11.77□□□□□ -0.53
TRIM49D1-202ENST00000530311 VIRMAQ69YN4 1812 aaKnown RBP11.77□□□□□ -0.53
TRIM49D1-202ENST00000530311 ITPRIPQ8IWB1 547 aa11.77□□□□□ -0.53
TRIM49D1-202ENST00000530311 TBC1D32Q96NH3 1257 aa11.77□□□□□ -0.53
TRIM49D1-202ENST00000530311 NEO1Q92859 1461 aa11.76□□□□□ -0.53
TRIM49D1-202ENST00000530311 SPRYD3Q8NCJ5 442 aa11.76□□□□□ -0.53
TRIM49D1-202ENST00000530311 BECN1Q14457 450 aa11.75□□□□□ -0.53
TRIM49D1-202ENST00000530311 NCBP3Q53F19 620 aaKnown RBP11.75□□□□□ -0.53
TRIM49D1-202ENST00000530311 TBC1D2Q9BYX2 928 aa11.75□□□□□ -0.53
TRIM49D1-202ENST00000530311 CABP1Q9NZU7 370 aa11.75□□□□□ -0.53
TRIM49D1-202ENST00000530311 ADGRB2O60241 1585 aa11.75□□□□□ -0.53
TRIM49D1-202ENST00000530311 MYO5BQ9ULV0 1848 aa11.75□□□□□ -0.53
TRIM49D1-202ENST00000530311 YEATS2Q9ULM3 1422 aa11.75□□□□□ -0.53
TRIM49D1-202ENST00000530311 TMEM57Q8N5G2 664 aa11.75□□□□□ -0.53
TRIM49D1-202ENST00000530311 CDK19Q9BWU1 502 aa11.75□□□□□ -0.53
TRIM49D1-202ENST00000530311 COL3A1P02461 1466 aaPredicted RBP11.75□□□□□ -0.53
TRIM49D1-202ENST00000530311 ATF7IPQ6VMQ6 1270 aa11.74□□□□□ -0.53
TRIM49D1-202ENST00000530311 ANTXR1Q9H6X2 564 aa11.74□□□□□ -0.53
TRIM49D1-202ENST00000530311 SLC52A1Q9NWF4 448 aa11.74□□□□□ -0.53
TRIM49D1-202ENST00000530311 TERF2IPQ9NYB0 399 aa11.74□□□□□ -0.53
TRIM49D1-202ENST00000530311 CD163L1Q9NR16 1453 aa11.74□□□□□ -0.53
TRIM49D1-202ENST00000530311 DIAPH1O60610 1272 aaKnown RBP11.74□□□□□ -0.53
TRIM49D1-202ENST00000530311 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.74□□□□□ -0.53
TRIM49D1-202ENST00000530311 UPF2Q9HAU5 1272 aaKnown RBP11.74□□□□□ -0.53
TRIM49D1-202ENST00000530311 PTPRMP28827 1452 aa11.73□□□□□ -0.53
TRIM49D1-202ENST00000530311 CT47B1P0C2W7 299 aaPredicted RBP11.72□□□□□ -0.53
TRIM49D1-202ENST00000530311 WAPLQ7Z5K2 1190 aa11.72□□□□□ -0.53
TRIM49D1-202ENST00000530311 MFAP1P55081 439 aaKnown RBP11.72□□□□□ -0.53
TRIM49D1-202ENST00000530311 DDX19BQ9UMR2 479 aa11.72□□□□□ -0.53
TRIM49D1-202ENST00000530311 ARHGAP31Q2M1Z3 1444 aa11.72□□□□□ -0.53
TRIM49D1-202ENST00000530311 YTHDC2Q9H6S0 1430 aaKnown RBP11.72□□□□□ -0.53
TRIM49D1-202ENST00000530311 KCNA4P22459 653 aa11.71□□□□□ -0.53
TRIM49D1-202ENST00000530311 HDAC1Q13547 482 aaPredicted RBP11.71□□□□□ -0.53
TRIM49D1-202ENST00000530311 HDGFL2Q7Z4V5 671 aaPredicted RBP11.71□□□□□ -0.53
TRIM49D1-202ENST00000530311 THUMPD2Q9BTF0 503 aaKnown RBP11.71□□□□□ -0.53
TRIM49D1-202ENST00000530311 ANO8Q9HCE9 1232 aaPredicted RBP11.71□□□□□ -0.53
TRIM49D1-202ENST00000530311 ZFYVE9O95405 1425 aa11.71□□□□□ -0.53
TRIM49D1-202ENST00000530311 ATAD2Q6PL18 1390 aa11.71□□□□□ -0.54
TRIM49D1-202ENST00000530311 PHACTR3Q96KR7 559 aa11.71□□□□□ -0.54
TRIM49D1-202ENST00000530311 ZBTB40Q9NUA8 1239 aa11.71□□□□□ -0.54
TRIM49D1-202ENST00000530311 HMOX1P09601 288 aa11.7□□□□□ -0.54
TRIM49D1-202ENST00000530311 PRKAR2BP31323 418 aa11.7□□□□□ -0.54
TRIM49D1-202ENST00000530311 C22orf23Q9BZE7 217 aa11.7□□□□□ -0.54
TRIM49D1-202ENST00000530311 IL16Q14005 1332 aa11.7□□□□□ -0.54
TRIM49D1-202ENST00000530311 PREX1Q8TCU6 1659 aa11.7□□□□□ -0.54
TRIM49D1-202ENST00000530311 POLKQ9UBT6 870 aa11.69□□□□□ -0.54
TRIM49D1-202ENST00000530311 PNPLA6Q8IY17 1366 aa11.69□□□□□ -0.54
TRIM49D1-202ENST00000530311 SMC5Q8IY18 1101 aa11.69□□□□□ -0.54
TRIM49D1-202ENST00000530311 STAG3Q9UJ98 1225 aa11.69□□□□□ -0.54
TRIM49D1-202ENST00000530311 ZMYM3Q14202 1370 aa11.69□□□□□ -0.54
TRIM49D1-202ENST00000530311 RSPH6AQ9H0K4 717 aa11.68□□□□□ -0.54
TRIM49D1-202ENST00000530311 ZRANB1Q9UGI0 708 aa11.68□□□□□ -0.54
TRIM49D1-202ENST00000530311 TMEM131LA2VDJ0 1609 aa11.68□□□□□ -0.54
TRIM49D1-202ENST00000530311 ELL2O00472 640 aaPredicted RBP11.68□□□□□ -0.54
TRIM49D1-202ENST00000530311 FCHSD2O94868 740 aa11.68□□□□□ -0.54
TRIM49D1-202ENST00000530311 LNPKQ9C0E8 428 aa11.68□□□□□ -0.54
TRIM49D1-202ENST00000530311 TSPYL6Q8N831 410 aa11.67□□□□□ -0.54
TRIM49D1-202ENST00000530311 C1orf115Q9H7X2 142 aa11.67□□□□□ -0.54
TRIM49D1-202ENST00000530311 IPO8O15397 1037 aaKnown RBP11.67□□□□□ -0.54
TRIM49D1-202ENST00000530311 EMILIN1Q9Y6C2 1016 aa11.67□□□□□ -0.54
TRIM49D1-202ENST00000530311 ARHGEF40Q8TER5 1519 aa11.66□□□□□ -0.54
TRIM49D1-202ENST00000530311 TSPOAP1O95153 1857 aa11.66□□□□□ -0.54
TRIM49D1-202ENST00000530311 ALKQ9UM73 1620 aa11.66□□□□□ -0.54
TRIM49D1-202ENST00000530311 MED14O60244 1454 aa11.65□□□□□ -0.54
TRIM49D1-202ENST00000530311 NCKAP5LQ9HCH0 1330 aa11.65□□□□□ -0.54
TRIM49D1-202ENST00000530311 NUCB1Q02818 461 aa11.65□□□□□ -0.54
TRIM49D1-202ENST00000530311 DIP2BQ9P265 1576 aa11.65□□□□□ -0.54
TRIM49D1-202ENST00000530311 KIF16BQ96L93 1317 aa11.65□□□□□ -0.54
TRIM49D1-202ENST00000530311 VAMP4O75379 141 aa11.65□□□□□ -0.54
TRIM49D1-202ENST00000530311 ALDH1L2Q3SY69 923 aa11.65□□□□□ -0.54
TRIM49D1-202ENST00000530311 NME9Q86XW9 330 aa11.65□□□□□ -0.54
TRIM49D1-202ENST00000530311 PNNQ9H307 717 aaKnown RBP11.65□□□□□ -0.54
TRIM49D1-202ENST00000530311 NFE2L2Q16236 605 aa11.64□□□□□ -0.55
TRIM49D1-202ENST00000530311 MRPL50Q8N5N7 158 aaKnown RBP11.64□□□□□ -0.55
TRIM49D1-202ENST00000530311 ARXQ96QS3 562 aa11.64□□□□□ -0.55
TRIM49D1-202ENST00000530311 RIMBP3CA6NJZ7 1639 aa11.64□□□□□ -0.55
TRIM49D1-202ENST00000530311 RIMBP3BA6NNM3 1639 aa11.64□□□□□ -0.55
TRIM49D1-202ENST00000530311 RIMBP3Q9UFD9 1639 aa11.64□□□□□ -0.55
TRIM49D1-202ENST00000530311 LRRC7Q96NW7 1537 aa11.64□□□□□ -0.55
TRIM49D1-202ENST00000530311 ZBTB7BO15156 539 aaPredicted RBP11.64□□□□□ -0.55
TRIM49D1-202ENST00000530311 CHD1LQ86WJ1 897 aa11.64□□□□□ -0.55
TRIM49D1-202ENST00000530311 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.64□□□□□ -0.55
TRIM49D1-202ENST00000530311 ANKRD45Q5TZF3 282 aa11.63□□□□□ -0.55
TRIM49D1-202ENST00000530311 CYB5RLQ6IPT4 315 aa11.63□□□□□ -0.55
TRIM49D1-202ENST00000530311 FAM135BQ49AJ0 1406 aa11.63□□□□□ -0.55
TRIM49D1-202ENST00000530311 ANKRD26Q9UPS8 1709 aa11.63□□□□□ -0.55
TRIM49D1-202ENST00000530311 FAM83GA6ND36 823 aa11.62□□□□□ -0.55
TRIM49D1-202ENST00000530311 IL13P35225 146 aa11.62□□□□□ -0.55
TRIM49D1-202ENST00000530311 MLECQ14165 292 aa11.62□□□□□ -0.55
TRIM49D1-202ENST00000530311 GZF1Q9H116 711 aaPredicted RBP11.62□□□□□ -0.55
TRIM49D1-202ENST00000530311 MBIPQ9NS73 344 aa11.62□□□□□ -0.55
TRIM49D1-202ENST00000530311 CLTCQ00610 1675 aaKnown RBP11.62□□□□□ -0.55
TRIM49D1-202ENST00000530311 MCM4P33991 863 aa11.62□□□□□ -0.55
TRIM49D1-202ENST00000530311 RRS1Q15050 365 aaKnown RBP11.62□□□□□ -0.55
TRIM49D1-202ENST00000530311 SIRT2Q8IXJ6 389 aa11.62□□□□□ -0.55
TRIM49D1-202ENST00000530311 DCTN1Q14203 1278 aa11.61□□□□□ -0.55
TRIM49D1-202ENST00000530311 TXNDC2Q86VQ3 553 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms