RNA–Protein interactions for RNA: ENST00000529773.1

CLP1-204, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-204ENST00000529773 TMC1Q8TDI8 760 aa24.23■■□□□ 1.47
CLP1-204ENST00000529773 LRRC59Q96AG4 307 aaKnown RBP24.23■■□□□ 1.47
CLP1-204ENST00000529773 TERF2IPQ9NYB0 399 aa24.23■■□□□ 1.47
CLP1-204ENST00000529773 SPATA31A3Q5VYP0 1347 aa24.23■■□□□ 1.47
CLP1-204ENST00000529773 EDC4Q6P2E9 1401 aaKnown RBP24.23■■□□□ 1.47
CLP1-204ENST00000529773 PNPLA6Q8IY17 1366 aa24.22■■□□□ 1.47
CLP1-204ENST00000529773 JCADQ9P266 1359 aa24.22■■□□□ 1.47
CLP1-204ENST00000529773 KTN1Q86UP2 1357 aaKnown RBP24.21■■□□□ 1.47
CLP1-204ENST00000529773 XPCQ01831 940 aaPredicted RBP24.21■■□□□ 1.47
CLP1-204ENST00000529773 USP54Q70EL1 1684 aa24.21■■□□□ 1.47
CLP1-204ENST00000529773 ARHGEF10O15013 1369 aa24.2■■□□□ 1.46
CLP1-204ENST00000529773 HDGFL2Q7Z4V5 671 aaPredicted RBP24.2■■□□□ 1.46
CLP1-204ENST00000529773 PIK3C2AO00443 1686 aa24.19■■□□□ 1.46
CLP1-204ENST00000529773 CRYBG1Q9Y4K1 1723 aa24.18■■□□□ 1.46
CLP1-204ENST00000529773 TTC21AQ8NDW8 1320 aa24.17■■□□□ 1.46
CLP1-204ENST00000529773 ABCA3Q99758 1704 aa24.16■■□□□ 1.46
CLP1-204ENST00000529773 TTC21BQ7Z4L5 1316 aa24.15■■□□□ 1.46
CLP1-204ENST00000529773 MARF1Q9Y4F3 1742 aaKnown RBP24.15■■□□□ 1.46
CLP1-204ENST00000529773 SPATA31A6Q5VVP1 1343 aa24.12■■□□□ 1.45
CLP1-204ENST00000529773 POLR3GLQ9BT43 218 aa24.12■■□□□ 1.45
CLP1-204ENST00000529773 USP31Q70CQ4 1352 aa24.12■■□□□ 1.45
CLP1-204ENST00000529773 NSD3Q9BZ95 1437 aa24.11■■□□□ 1.45
CLP1-204ENST00000529773 CARD14Q9BXL6 1004 aa24.11■■□□□ 1.45
CLP1-204ENST00000529773 USP19O94966 1318 aa24.1■■□□□ 1.45
CLP1-204ENST00000529773 SLIT3O75094 1523 aa24.1■■□□□ 1.45
CLP1-204ENST00000529773 PHRF1Q9P1Y6 1649 aaKnown RBP24.1■■□□□ 1.45
CLP1-204ENST00000529773 PANK3Q9H999 370 aa24.09■■□□□ 1.45
CLP1-204ENST00000529773 KIF20BQ96Q89 1820 aa24.09■■□□□ 1.45
CLP1-204ENST00000529773 OVOS2A0A0J9YW53 1432 aa24.09■■□□□ 1.45
CLP1-204ENST00000529773 OVOS2Q6IE36 1432 aa24.09■■□□□ 1.45
CLP1-204ENST00000529773 PAK3O75914 559 aaPredicted RBP24.08■■□□□ 1.45
CLP1-204ENST00000529773 LRP6O75581 1613 aa24.07■■□□□ 1.44
CLP1-204ENST00000529773 ABTB2Q8N961 1025 aa24.06■■□□□ 1.44
CLP1-204ENST00000529773 ANKRD26Q9UPS8 1709 aa24.04■■□□□ 1.44
CLP1-204ENST00000529773 NME9Q86XW9 330 aa24.03■■□□□ 1.44
CLP1-204ENST00000529773 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.03■■□□□ 1.44
CLP1-204ENST00000529773 NSD2O96028 1365 aa24.03■■□□□ 1.44
CLP1-204ENST00000529773 NFAT5O94916 1531 aa24.02■■□□□ 1.44
CLP1-204ENST00000529773 PER1O15534 1290 aaPredicted RBP24.02■■□□□ 1.44
CLP1-204ENST00000529773 NLRP13Q86W25 1043 aa24.02■■□□□ 1.44
CLP1-204ENST00000529773 CGNL1Q0VF96 1302 aa24.02■■□□□ 1.44
CLP1-204ENST00000529773 ZNF316A6NFI3 1004 aaPredicted RBP24.01■■□□□ 1.43
CLP1-204ENST00000529773 FYB1O15117 783 aa24.01■■□□□ 1.43
CLP1-204ENST00000529773 LMOD2Q6P5Q4 547 aa24.01■■□□□ 1.43
CLP1-204ENST00000529773 NPC1L1Q9UHC9 1359 aa24■■□□□ 1.43
CLP1-204ENST00000529773 NLRP6P59044 892 aa23.99■■□□□ 1.43
CLP1-204ENST00000529773 CPDO75976 1380 aa23.97■■□□□ 1.43
CLP1-204ENST00000529773 AMER1Q5JTC6 1135 aaPredicted RBP23.97■■□□□ 1.43
CLP1-204ENST00000529773 NUTM2GQ5VZR2 741 aa23.97■■□□□ 1.43
CLP1-204ENST00000529773 CABLES1Q8TDN4 633 aa23.96■■□□□ 1.43
CLP1-204ENST00000529773 ZRANB1Q9UGI0 708 aa23.96■■□□□ 1.43
CLP1-204ENST00000529773 ABCC6O95255 1503 aa23.95■■□□□ 1.43
CLP1-204ENST00000529773 KNSTRNQ9Y448 316 aa23.95■■□□□ 1.42
CLP1-204ENST00000529773 GCP02774 474 aa23.93■■□□□ 1.42
CLP1-204ENST00000529773 KCNH5Q8NCM2 988 aa23.93■■□□□ 1.42
CLP1-204ENST00000529773 COG3Q96JB2 828 aa23.93■■□□□ 1.42
CLP1-204ENST00000529773 GGNBP2Q9H3C7 697 aa23.92■■□□□ 1.42
CLP1-204ENST00000529773 COL14A1Q05707 1796 aaKnown RBP23.92■■□□□ 1.42
CLP1-204ENST00000529773 LMO7Q8WWI1 1683 aa23.92■■□□□ 1.42
CLP1-204ENST00000529773 NUTM2BA6NNL0 878 aaPredicted RBP23.9■■□□□ 1.42
CLP1-204ENST00000529773 NUTM2EB1AL46 878 aaPredicted RBP23.9■■□□□ 1.42
CLP1-204ENST00000529773 NUTM2AQ8IVF1 878 aaPredicted RBP23.9■■□□□ 1.42
CLP1-204ENST00000529773 PLCH1Q4KWH8 1693 aa23.89■■□□□ 1.42
CLP1-204ENST00000529773 NWD2Q9ULI1 1742 aa23.89■■□□□ 1.41
CLP1-204ENST00000529773 AATKQ6ZMQ8 1374 aa23.89■■□□□ 1.41
CLP1-204ENST00000529773 KIAA0232Q92628 1395 aa23.89■■□□□ 1.41
CLP1-204ENST00000529773 SLIT2O94813 1529 aa23.89■■□□□ 1.41
CLP1-204ENST00000529773 COL18A1P39060 1754 aa23.88■■□□□ 1.41
CLP1-204ENST00000529773 HAP1P54257 671 aaPredicted RBP23.87■■□□□ 1.41
CLP1-204ENST00000529773 DDX10Q13206 875 aaKnown RBP23.87■■□□□ 1.41
CLP1-204ENST00000529773 LTN1O94822 1766 aa23.87■■□□□ 1.41
CLP1-204ENST00000529773 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.87■■□□□ 1.41
CLP1-204ENST00000529773 ADAMTS2O95450 1211 aa23.86■■□□□ 1.41
CLP1-204ENST00000529773 ARHGEF25Q86VW2 580 aa23.86■■□□□ 1.41
CLP1-204ENST00000529773 NRAPQ86VF7 1730 aa23.86■■□□□ 1.41
CLP1-204ENST00000529773 SMG6Q86US8 1419 aaKnown RBP23.85■■□□□ 1.41
CLP1-204ENST00000529773 FNBP4Q8N3X1 1017 aaPredicted RBP23.84■■□□□ 1.41
CLP1-204ENST00000529773 RTL1A6NKG5 1358 aa23.83■■□□□ 1.41
CLP1-204ENST00000529773 KIF24Q5T7B8 1368 aa23.83■■□□□ 1.41
CLP1-204ENST00000529773 FAM83GA6ND36 823 aa23.82■■□□□ 1.4
CLP1-204ENST00000529773 PLEKHG5O94827 1062 aa23.82■■□□□ 1.4
CLP1-204ENST00000529773 PRDM11Q9NQV5 511 aa23.82■■□□□ 1.4
CLP1-204ENST00000529773 BCL9LQ86UU0 1499 aa23.81■■□□□ 1.4
CLP1-204ENST00000529773 ZC3H6P61129 1189 aaKnown RBP23.81■■□□□ 1.4
CLP1-204ENST00000529773 MEX3CQ5U5Q3 659 aaKnown RBP23.81■■□□□ 1.4
CLP1-204ENST00000529773 C8orf37Q96NL8 207 aa23.81■■□□□ 1.4
CLP1-204ENST00000529773 PEAK1Q9H792 1746 aa23.81■■□□□ 1.4
CLP1-204ENST00000529773 CAMTA1Q9Y6Y1 1673 aa23.8■■□□□ 1.4
CLP1-204ENST00000529773 MAP3K19Q56UN5 1328 aa23.79■■□□□ 1.4
CLP1-204ENST00000529773 PARD3Q8TEW0 1356 aa23.78■■□□□ 1.4
CLP1-204ENST00000529773 BLMP54132 1417 aaPredicted RBP23.78■■□□□ 1.4
CLP1-204ENST00000529773 MORC1Q86VD1 984 aa23.78■■□□□ 1.4
CLP1-204ENST00000529773 COL5A2P05997 1499 aaPredicted RBP23.78■■□□□ 1.4
CLP1-204ENST00000529773 SOX12O15370 315 aa23.77■■□□□ 1.4
CLP1-204ENST00000529773 CC2D1BQ5T0F9 858 aaKnown RBP23.77■■□□□ 1.4
CLP1-204ENST00000529773 AFF2P51816 1311 aa23.77■■□□□ 1.4
CLP1-204ENST00000529773 CHRNA2Q15822 529 aa23.76■■□□□ 1.39
CLP1-204ENST00000529773 NGLY1Q96IV0 654 aa23.76■■□□□ 1.39
CLP1-204ENST00000529773 CDK12Q9NYV4 1490 aaPredicted RBP23.75■■□□□ 1.39
CLP1-204ENST00000529773 MAP2P11137 1827 aaKnown RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms