RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 SOS2Q07890 1332 aaPredicted RBP15.77■□□□□ 0.12
CAPN1-217ENST00000529133 SBNO1A3KN83 1393 aa15.76■□□□□ 0.11
CAPN1-217ENST00000529133 TTC21BQ7Z4L5 1316 aa15.76■□□□□ 0.11
CAPN1-217ENST00000529133 COL16A1Q07092 1604 aaPredicted RBP15.75■□□□□ 0.11
CAPN1-217ENST00000529133 PHLPP1O60346 1717 aa15.74■□□□□ 0.11
CAPN1-217ENST00000529133 PER1O15534 1290 aaPredicted RBP15.74■□□□□ 0.11
CAPN1-217ENST00000529133 TNS3Q68CZ2 1445 aa15.74■□□□□ 0.11
CAPN1-217ENST00000529133 TTC21AQ8NDW8 1320 aa15.73■□□□□ 0.11
CAPN1-217ENST00000529133 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.73■□□□□ 0.11
CAPN1-217ENST00000529133 SPATA31A3Q5VYP0 1347 aa15.72■□□□□ 0.11
CAPN1-217ENST00000529133 PAK3O75914 559 aaPredicted RBP15.72■□□□□ 0.11
CAPN1-217ENST00000529133 PIK3C2AO00443 1686 aa15.72■□□□□ 0.11
CAPN1-217ENST00000529133 ALS2Q96Q42 1657 aa15.72■□□□□ 0.11
CAPN1-217ENST00000529133 NME9Q86XW9 330 aa15.71■□□□□ 0.11
CAPN1-217ENST00000529133 FBXO41Q8TF61 875 aa15.71■□□□□ 0.11
CAPN1-217ENST00000529133 KNSTRNQ9Y448 316 aa15.71■□□□□ 0.11
CAPN1-217ENST00000529133 CGNL1Q0VF96 1302 aa15.7■□□□□ 0.1
CAPN1-217ENST00000529133 AMER1Q5JTC6 1135 aaPredicted RBP15.7■□□□□ 0.1
CAPN1-217ENST00000529133 HSPA1LP34931 641 aa15.69■□□□□ 0.1
CAPN1-217ENST00000529133 ARHGEF10O15013 1369 aa15.69■□□□□ 0.1
CAPN1-217ENST00000529133 USP31Q70CQ4 1352 aa15.69■□□□□ 0.1
CAPN1-217ENST00000529133 OVOS2A0A0J9YW53 1432 aa15.68■□□□□ 0.1
CAPN1-217ENST00000529133 OVOS2Q6IE36 1432 aa15.68■□□□□ 0.1
CAPN1-217ENST00000529133 KIF20BQ96Q89 1820 aa15.68■□□□□ 0.1
CAPN1-217ENST00000529133 NSD2O96028 1365 aa15.68■□□□□ 0.1
CAPN1-217ENST00000529133 PNPLA6Q8IY17 1366 aa15.68■□□□□ 0.1
CAPN1-217ENST00000529133 NPC1L1Q9UHC9 1359 aa15.68■□□□□ 0.1
CAPN1-217ENST00000529133 FYB1O15117 783 aa15.68■□□□□ 0.1
CAPN1-217ENST00000529133 LMOD2Q6P5Q4 547 aa15.68■□□□□ 0.1
CAPN1-217ENST00000529133 ABTB2Q8N961 1025 aa15.68■□□□□ 0.1
CAPN1-217ENST00000529133 LRRC59Q96AG4 307 aaKnown RBP15.68■□□□□ 0.1
CAPN1-217ENST00000529133 ZRANB1Q9UGI0 708 aa15.68■□□□□ 0.1
CAPN1-217ENST00000529133 USP54Q70EL1 1684 aa15.67■□□□□ 0.1
CAPN1-217ENST00000529133 MED1Q15648 1581 aaPredicted RBP15.67■□□□□ 0.1
CAPN1-217ENST00000529133 NUTM2GQ5VZR2 741 aa15.67■□□□□ 0.1
CAPN1-217ENST00000529133 GGNBP2Q9H3C7 697 aa15.67■□□□□ 0.1
CAPN1-217ENST00000529133 MARF1Q9Y4F3 1742 aaKnown RBP15.66■□□□□ 0.1
CAPN1-217ENST00000529133 USP19O94966 1318 aa15.66■□□□□ 0.1
CAPN1-217ENST00000529133 COL22A1Q8NFW1 1626 aaPredicted RBP15.65■□□□□ 0.1
CAPN1-217ENST00000529133 NLRP6P59044 892 aa15.65■□□□□ 0.1
CAPN1-217ENST00000529133 CC2D1BQ5T0F9 858 aaKnown RBP15.65■□□□□ 0.1
CAPN1-217ENST00000529133 JCADQ9P266 1359 aa15.64■□□□□ 0.09
CAPN1-217ENST00000529133 SLIT3O75094 1523 aa15.64■□□□□ 0.09
CAPN1-217ENST00000529133 NLRP13Q86W25 1043 aa15.64■□□□□ 0.09
CAPN1-217ENST00000529133 COG3Q96JB2 828 aa15.64■□□□□ 0.09
CAPN1-217ENST00000529133 ANKRD26Q9UPS8 1709 aa15.64■□□□□ 0.09
CAPN1-217ENST00000529133 SHPRHQ149N8 1683 aa15.63■□□□□ 0.09
CAPN1-217ENST00000529133 CRYBG1Q9Y4K1 1723 aa15.63■□□□□ 0.09
CAPN1-217ENST00000529133 PHRF1Q9P1Y6 1649 aaKnown RBP15.62■□□□□ 0.09
CAPN1-217ENST00000529133 CNGB1Q14028 1251 aaPredicted RBP15.62■□□□□ 0.09
CAPN1-217ENST00000529133 ABCA3Q99758 1704 aa15.62■□□□□ 0.09
CAPN1-217ENST00000529133 PLEKHG5O94827 1062 aa15.61■□□□□ 0.09
CAPN1-217ENST00000529133 CABLES1Q8TDN4 633 aa15.61■□□□□ 0.09
CAPN1-217ENST00000529133 NFAT5O94916 1531 aa15.6■□□□□ 0.09
CAPN1-217ENST00000529133 MORC1Q86VD1 984 aa15.6■□□□□ 0.09
CAPN1-217ENST00000529133 PARD3Q8TEW0 1356 aa15.6■□□□□ 0.09
CAPN1-217ENST00000529133 GCP02774 474 aa15.58■□□□□ 0.08
CAPN1-217ENST00000529133 KCNH5Q8NCM2 988 aa15.58■□□□□ 0.08
CAPN1-217ENST00000529133 SOX12O15370 315 aa15.57■□□□□ 0.08
CAPN1-217ENST00000529133 TNNT2P45379 298 aaPredicted RBP15.57■□□□□ 0.08
CAPN1-217ENST00000529133 DIEXFQ68CQ4 756 aaKnown RBP15.57■□□□□ 0.08
CAPN1-217ENST00000529133 SPATA31A6Q5VVP1 1343 aa15.57■□□□□ 0.08
CAPN1-217ENST00000529133 AATKQ6ZMQ8 1374 aa15.57■□□□□ 0.08
CAPN1-217ENST00000529133 HAP1P54257 671 aaPredicted RBP15.56■□□□□ 0.08
CAPN1-217ENST00000529133 PRKRIP1Q9H875 184 aaPredicted RBP15.56■□□□□ 0.08
CAPN1-217ENST00000529133 LRP6O75581 1613 aa15.55■□□□□ 0.08
CAPN1-217ENST00000529133 FBLN1P23142 703 aa15.55■□□□□ 0.08
CAPN1-217ENST00000529133 RALBP1Q15311 655 aa15.55■□□□□ 0.08
CAPN1-217ENST00000529133 CPDO75976 1380 aa15.54■□□□□ 0.08
CAPN1-217ENST00000529133 NUTM2BA6NNL0 878 aaPredicted RBP15.54■□□□□ 0.08
CAPN1-217ENST00000529133 NUTM2EB1AL46 878 aaPredicted RBP15.54■□□□□ 0.08
CAPN1-217ENST00000529133 ANP32CO43423 234 aa15.54■□□□□ 0.08
CAPN1-217ENST00000529133 NUTM2AQ8IVF1 878 aaPredicted RBP15.54■□□□□ 0.08
CAPN1-217ENST00000529133 SMG6Q86US8 1419 aaKnown RBP15.53■□□□□ 0.08
CAPN1-217ENST00000529133 KIAA0232Q92628 1395 aa15.53■□□□□ 0.08
CAPN1-217ENST00000529133 ZC3H6P61129 1189 aaKnown RBP15.53■□□□□ 0.08
CAPN1-217ENST00000529133 RRS1Q15050 365 aaKnown RBP15.53■□□□□ 0.08
CAPN1-217ENST00000529133 MAP3K19Q56UN5 1328 aa15.52■□□□□ 0.08
CAPN1-217ENST00000529133 PPP2R1AP30153 589 aa15.52■□□□□ 0.08
CAPN1-217ENST00000529133 ARHGEF25Q86VW2 580 aa15.52■□□□□ 0.08
CAPN1-217ENST00000529133 MYBBP1AQ9BQG0 1328 aaKnown RBP15.51■□□□□ 0.07
CAPN1-217ENST00000529133 ADAMTS2O95450 1211 aa15.51■□□□□ 0.07
CAPN1-217ENST00000529133 ILDR1Q86SU0 546 aaPredicted RBP15.51■□□□□ 0.07
CAPN1-217ENST00000529133 POLKQ9UBT6 870 aa15.51■□□□□ 0.07
CAPN1-217ENST00000529133 EMILIN1Q9Y6C2 1016 aa15.51■□□□□ 0.07
CAPN1-217ENST00000529133 PEAK1Q9H792 1746 aa15.51■□□□□ 0.07
CAPN1-217ENST00000529133 ABCC6O95255 1503 aa15.5■□□□□ 0.07
CAPN1-217ENST00000529133 ZBTB7CA1YPR0 619 aa15.5■□□□□ 0.07
CAPN1-217ENST00000529133 PRDM11Q9NQV5 511 aa15.5■□□□□ 0.07
CAPN1-217ENST00000529133 RTL1A6NKG5 1358 aa15.49■□□□□ 0.07
CAPN1-217ENST00000529133 KIF24Q5T7B8 1368 aa15.49■□□□□ 0.07
CAPN1-217ENST00000529133 CDK12Q9NYV4 1490 aaPredicted RBP15.49■□□□□ 0.07
CAPN1-217ENST00000529133 LTN1O94822 1766 aa15.49■□□□□ 0.07
CAPN1-217ENST00000529133 LMO7Q8WWI1 1683 aa15.48■□□□□ 0.07
CAPN1-217ENST00000529133 MTHFSP49914 203 aa15.48■□□□□ 0.07
CAPN1-217ENST00000529133 CHRNA2Q15822 529 aa15.48■□□□□ 0.07
CAPN1-217ENST00000529133 COL14A1Q05707 1796 aaKnown RBP15.48■□□□□ 0.07
CAPN1-217ENST00000529133 FLT4P35916 1363 aa15.48■□□□□ 0.07
CAPN1-217ENST00000529133 COL18A1P39060 1754 aa15.47■□□□□ 0.07
CAPN1-217ENST00000529133 FAM83GA6ND36 823 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms