RNA–Protein interactions for RNA: ENST00000528662.6

MMP8-203, Transcript of matrix metallopeptidase 8, humanhuman

TSL 5

Gene MMP8, Length 2,423 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8-203ENST00000528662 PIK3C2AO00443 1686 aa11.59□□□□□ -0.55
MMP8-203ENST00000528662 KTN1Q86UP2 1357 aaKnown RBP11.59□□□□□ -0.55
MMP8-203ENST00000528662 CARD14Q9BXL6 1004 aa11.59□□□□□ -0.55
MMP8-203ENST00000528662 NPHP3Q7Z494 1330 aa11.59□□□□□ -0.55
MMP8-203ENST00000528662 ANKRD26Q9UPS8 1709 aa11.58□□□□□ -0.55
MMP8-203ENST00000528662 HDGFL2Q7Z4V5 671 aaPredicted RBP11.58□□□□□ -0.56
MMP8-203ENST00000528662 NGDNQ8NEJ9 315 aaKnown RBP11.58□□□□□ -0.56
MMP8-203ENST00000528662 PANK3Q9H999 370 aa11.58□□□□□ -0.56
MMP8-203ENST00000528662 SOS2Q07890 1332 aaPredicted RBP11.58□□□□□ -0.56
MMP8-203ENST00000528662 PER1O15534 1290 aaPredicted RBP11.58□□□□□ -0.56
MMP8-203ENST00000528662 FOXO3O43524 673 aa11.58□□□□□ -0.56
MMP8-203ENST00000528662 SBNO1A3KN83 1393 aa11.57□□□□□ -0.56
MMP8-203ENST00000528662 NSD3Q9BZ95 1437 aa11.57□□□□□ -0.56
MMP8-203ENST00000528662 CRYBG1Q9Y4K1 1723 aa11.57□□□□□ -0.56
MMP8-203ENST00000528662 DDX10Q13206 875 aaKnown RBP11.56□□□□□ -0.56
MMP8-203ENST00000528662 DDX17Q92841 729 aaKnown RBP11.56□□□□□ -0.56
MMP8-203ENST00000528662 MED1Q15648 1581 aaPredicted RBP11.55□□□□□ -0.56
MMP8-203ENST00000528662 PIP4K2BP78356 416 aa11.55□□□□□ -0.56
MMP8-203ENST00000528662 KRT28Q7Z3Y7 464 aa11.55□□□□□ -0.56
MMP8-203ENST00000528662 COL22A1Q8NFW1 1626 aaPredicted RBP11.55□□□□□ -0.56
MMP8-203ENST00000528662 TTC21AQ8NDW8 1320 aa11.55□□□□□ -0.56
MMP8-203ENST00000528662 TNS3Q68CZ2 1445 aa11.55□□□□□ -0.56
MMP8-203ENST00000528662 PSME1Q06323 249 aa11.55□□□□□ -0.56
MMP8-203ENST00000528662 TTC21BQ7Z4L5 1316 aa11.55□□□□□ -0.56
MMP8-203ENST00000528662 NPC1L1Q9UHC9 1359 aa11.54□□□□□ -0.56
MMP8-203ENST00000528662 SHPRHQ149N8 1683 aa11.54□□□□□ -0.56
MMP8-203ENST00000528662 ABCA3Q99758 1704 aa11.54□□□□□ -0.56
MMP8-203ENST00000528662 OVOS2A0A0J9YW53 1432 aa11.53□□□□□ -0.56
MMP8-203ENST00000528662 NSD2O96028 1365 aa11.53□□□□□ -0.56
MMP8-203ENST00000528662 AMER1Q5JTC6 1135 aaPredicted RBP11.53□□□□□ -0.56
MMP8-203ENST00000528662 SPATA31A3Q5VYP0 1347 aa11.53□□□□□ -0.56
MMP8-203ENST00000528662 OVOS2Q6IE36 1432 aa11.53□□□□□ -0.56
MMP8-203ENST00000528662 USP31Q70CQ4 1352 aa11.53□□□□□ -0.56
MMP8-203ENST00000528662 XPCQ01831 940 aaPredicted RBP11.52□□□□□ -0.56
MMP8-203ENST00000528662 PHRF1Q9P1Y6 1649 aaKnown RBP11.52□□□□□ -0.56
MMP8-203ENST00000528662 CGNL1Q0VF96 1302 aa11.52□□□□□ -0.57
MMP8-203ENST00000528662 SLIT3O75094 1523 aa11.52□□□□□ -0.57
MMP8-203ENST00000528662 ARHGEF10O15013 1369 aa11.51□□□□□ -0.57
MMP8-203ENST00000528662 FYB1O15117 783 aa11.51□□□□□ -0.57
MMP8-203ENST00000528662 KNSTRNQ9Y448 316 aa11.51□□□□□ -0.57
MMP8-203ENST00000528662 NME9Q86XW9 330 aa11.5□□□□□ -0.57
MMP8-203ENST00000528662 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.5□□□□□ -0.57
MMP8-203ENST00000528662 FBXO41Q8TF61 875 aa11.5□□□□□ -0.57
MMP8-203ENST00000528662 USP19O94966 1318 aa11.49□□□□□ -0.57
MMP8-203ENST00000528662 LRRC59Q96AG4 307 aaKnown RBP11.49□□□□□ -0.57
MMP8-203ENST00000528662 PNPLA6Q8IY17 1366 aa11.49□□□□□ -0.57
MMP8-203ENST00000528662 NFAT5O94916 1531 aa11.49□□□□□ -0.57
MMP8-203ENST00000528662 PAK3O75914 559 aaPredicted RBP11.48□□□□□ -0.57
MMP8-203ENST00000528662 ABTB2Q8N961 1025 aa11.48□□□□□ -0.57
MMP8-203ENST00000528662 HSPA1LP34931 641 aa11.47□□□□□ -0.57
MMP8-203ENST00000528662 ZRANB1Q9UGI0 708 aa11.47□□□□□ -0.57
MMP8-203ENST00000528662 PARD3Q8TEW0 1356 aa11.47□□□□□ -0.57
MMP8-203ENST00000528662 GGNBP2Q9H3C7 697 aa11.47□□□□□ -0.57
MMP8-203ENST00000528662 LTN1O94822 1766 aa11.46□□□□□ -0.58
MMP8-203ENST00000528662 JCADQ9P266 1359 aa11.46□□□□□ -0.58
MMP8-203ENST00000528662 NLRP6P59044 892 aa11.46□□□□□ -0.58
MMP8-203ENST00000528662 NLRP13Q86W25 1043 aa11.46□□□□□ -0.58
MMP8-203ENST00000528662 MAP2P11137 1827 aaKnown RBP11.45□□□□□ -0.58
MMP8-203ENST00000528662 COG3Q96JB2 828 aa11.45□□□□□ -0.58
MMP8-203ENST00000528662 AATKQ6ZMQ8 1374 aa11.44□□□□□ -0.58
MMP8-203ENST00000528662 CC2D1BQ5T0F9 858 aaKnown RBP11.44□□□□□ -0.58
MMP8-203ENST00000528662 SMG6Q86US8 1419 aaKnown RBP11.44□□□□□ -0.58
MMP8-203ENST00000528662 NUTM2GQ5VZR2 741 aa11.44□□□□□ -0.58
MMP8-203ENST00000528662 ABCC6O95255 1503 aa11.43□□□□□ -0.58
MMP8-203ENST00000528662 PEAK1Q9H792 1746 aa11.43□□□□□ -0.58
MMP8-203ENST00000528662 COL18A1P39060 1754 aa11.43□□□□□ -0.58
MMP8-203ENST00000528662 LMOD2Q6P5Q4 547 aa11.43□□□□□ -0.58
MMP8-203ENST00000528662 PRKRIP1Q9H875 184 aaPredicted RBP11.43□□□□□ -0.58
MMP8-203ENST00000528662 MORC1Q86VD1 984 aa11.42□□□□□ -0.58
MMP8-203ENST00000528662 LMO7Q8WWI1 1683 aa11.42□□□□□ -0.58
MMP8-203ENST00000528662 CPDO75976 1380 aa11.42□□□□□ -0.58
MMP8-203ENST00000528662 GCP02774 474 aa11.41□□□□□ -0.58
MMP8-203ENST00000528662 RALBP1Q15311 655 aa11.41□□□□□ -0.58
MMP8-203ENST00000528662 KCNH5Q8NCM2 988 aa11.41□□□□□ -0.58
MMP8-203ENST00000528662 CABLES1Q8TDN4 633 aa11.41□□□□□ -0.58
MMP8-203ENST00000528662 YTHDC1Q96MU7 727 aaKnown RBP11.41□□□□□ -0.58
MMP8-203ENST00000528662 SPATA31A6Q5VVP1 1343 aa11.41□□□□□ -0.58
MMP8-203ENST00000528662 LRP6O75581 1613 aa11.4□□□□□ -0.58
MMP8-203ENST00000528662 COL14A1Q05707 1796 aaKnown RBP11.4□□□□□ -0.58
MMP8-203ENST00000528662 KIF24Q5T7B8 1368 aa11.4□□□□□ -0.58
MMP8-203ENST00000528662 RGPD5Q99666 1765 aa11.39□□□□□ -0.59
MMP8-203ENST00000528662 PLCH1Q4KWH8 1693 aa11.39□□□□□ -0.59
MMP8-203ENST00000528662 CDK12Q9NYV4 1490 aaPredicted RBP11.39□□□□□ -0.59
MMP8-203ENST00000528662 RTL1A6NKG5 1358 aa11.39□□□□□ -0.59
MMP8-203ENST00000528662 ARHGEF25Q86VW2 580 aa11.39□□□□□ -0.59
MMP8-203ENST00000528662 PPP2R1AP30153 589 aa11.38□□□□□ -0.59
MMP8-203ENST00000528662 NWD2Q9ULI1 1742 aa11.38□□□□□ -0.59
MMP8-203ENST00000528662 MAP3K19Q56UN5 1328 aa11.38□□□□□ -0.59
MMP8-203ENST00000528662 MYBBP1AQ9BQG0 1328 aaKnown RBP11.38□□□□□ -0.59
MMP8-203ENST00000528662 ANP32CO43423 234 aa11.38□□□□□ -0.59
MMP8-203ENST00000528662 FBLN1P23142 703 aa11.38□□□□□ -0.59
MMP8-203ENST00000528662 POLKQ9UBT6 870 aa11.38□□□□□ -0.59
MMP8-203ENST00000528662 COL3A1P02461 1466 aaPredicted RBP11.38□□□□□ -0.59
MMP8-203ENST00000528662 NRAPQ86VF7 1730 aa11.37□□□□□ -0.59
MMP8-203ENST00000528662 INSRP06213 1382 aa11.37□□□□□ -0.59
MMP8-203ENST00000528662 KIAA0232Q92628 1395 aa11.37□□□□□ -0.59
MMP8-203ENST00000528662 TNNT2P45379 298 aaPredicted RBP11.37□□□□□ -0.59
MMP8-203ENST00000528662 MIER1Q8N108 512 aa11.37□□□□□ -0.59
MMP8-203ENST00000528662 RRS1Q15050 365 aaKnown RBP11.36□□□□□ -0.59
MMP8-203ENST00000528662 FLT4P35916 1363 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms