RNA–Protein interactions for RNA: ENST00000528614.1

AP002008.3-201, humanhuman

TSL 1 (best) BASIC

Gene AP002008.3, Length 2,587 nt, Biotype sense intronic.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002008.3-201ENST00000528614 ADGRB2O60241 1585 aa13.48□□□□□ -0.25
AP002008.3-201ENST00000528614 TRIM35Q9UPQ4 493 aa13.48□□□□□ -0.25
AP002008.3-201ENST00000528614 ALKQ9UM73 1620 aa13.47□□□□□ -0.25
AP002008.3-201ENST00000528614 COL3A1P02461 1466 aaPredicted RBP13.47□□□□□ -0.25
AP002008.3-201ENST00000528614 EXOSC9Q06265 439 aaKnown RBP13.47□□□□□ -0.25
AP002008.3-201ENST00000528614 ZKSCAN2Q63HK3 967 aa13.46□□□□□ -0.25
AP002008.3-201ENST00000528614 DIAPH1O60610 1272 aaKnown RBP13.46□□□□□ -0.26
AP002008.3-201ENST00000528614 CT47B1P0C2W7 299 aaPredicted RBP13.46□□□□□ -0.26
AP002008.3-201ENST00000528614 MED14O60244 1454 aa13.46□□□□□ -0.26
AP002008.3-201ENST00000528614 NLRP1Q9C000 1473 aa13.46□□□□□ -0.26
AP002008.3-201ENST00000528614 MVPQ14764 893 aaKnown RBP13.45□□□□□ -0.26
AP002008.3-201ENST00000528614 ARHGEF40Q8TER5 1519 aa13.45□□□□□ -0.26
AP002008.3-201ENST00000528614 RIPK4P57078 832 aa13.45□□□□□ -0.26
AP002008.3-201ENST00000528614 WAPLQ7Z5K2 1190 aa13.45□□□□□ -0.26
AP002008.3-201ENST00000528614 DZIP1LQ8IYY4 767 aaKnown RBP13.45□□□□□ -0.26
AP002008.3-201ENST00000528614 RWDD1Q9H446 243 aaPredicted RBP13.45□□□□□ -0.26
AP002008.3-201ENST00000528614 CLTCQ00610 1675 aaKnown RBP13.44□□□□□ -0.26
AP002008.3-201ENST00000528614 SEC24BO95487 1268 aa13.44□□□□□ -0.26
AP002008.3-201ENST00000528614 PDZRN3Q9UPQ7 1066 aa13.44□□□□□ -0.26
AP002008.3-201ENST00000528614 USP19O94966 1318 aa13.44□□□□□ -0.26
AP002008.3-201ENST00000528614 SMC4Q9NTJ3 1288 aa13.44□□□□□ -0.26
AP002008.3-201ENST00000528614 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.43□□□□□ -0.26
AP002008.3-201ENST00000528614 FTSJ3Q8IY81 847 aaKnown RBP13.43□□□□□ -0.26
AP002008.3-201ENST00000528614 PPP6R1Q9UPN7 881 aa13.43□□□□□ -0.26
AP002008.3-201ENST00000528614 PNPLA6Q8IY17 1366 aa13.43□□□□□ -0.26
AP002008.3-201ENST00000528614 PNNQ9H307 717 aaKnown RBP13.43□□□□□ -0.26
AP002008.3-201ENST00000528614 IL16Q14005 1332 aa13.43□□□□□ -0.26
AP002008.3-201ENST00000528614 FBLN1P23142 703 aa13.42□□□□□ -0.26
AP002008.3-201ENST00000528614 SSH1Q8WYL5 1049 aa13.42□□□□□ -0.26
AP002008.3-201ENST00000528614 NFKBIBQ15653 356 aa13.42□□□□□ -0.26
AP002008.3-201ENST00000528614 ANKRD26Q9UPS8 1709 aa13.42□□□□□ -0.26
AP002008.3-201ENST00000528614 MLECQ14165 292 aa13.41□□□□□ -0.26
AP002008.3-201ENST00000528614 A2ML1A8K2U0 1454 aa13.41□□□□□ -0.26
AP002008.3-201ENST00000528614 FCHSD2O94868 740 aa13.4□□□□□ -0.26
AP002008.3-201ENST00000528614 TRIM27P14373 513 aa13.4□□□□□ -0.26
AP002008.3-201ENST00000528614 POLKQ9UBT6 870 aa13.4□□□□□ -0.26
AP002008.3-201ENST00000528614 NOB1Q9ULX3 412 aaKnown RBP13.4□□□□□ -0.26
AP002008.3-201ENST00000528614 RIMS2Q9UQ26 1411 aa13.4□□□□□ -0.26
AP002008.3-201ENST00000528614 ATF7IPQ6VMQ6 1270 aa13.39□□□□□ -0.27
AP002008.3-201ENST00000528614 AGLP35573 1532 aa13.38□□□□□ -0.27
AP002008.3-201ENST00000528614 DLC1Q96QB1 1528 aa13.38□□□□□ -0.27
AP002008.3-201ENST00000528614 PRKAR2BP31323 418 aa13.38□□□□□ -0.27
AP002008.3-201ENST00000528614 ITPRIPQ8IWB1 547 aa13.38□□□□□ -0.27
AP002008.3-201ENST00000528614 RSPH6AQ9H0K4 717 aa13.38□□□□□ -0.27
AP002008.3-201ENST00000528614 DDX19BQ9UMR2 479 aa13.38□□□□□ -0.27
AP002008.3-201ENST00000528614 VIRMAQ69YN4 1812 aaKnown RBP13.38□□□□□ -0.27
AP002008.3-201ENST00000528614 DIP2BQ9P265 1576 aa13.37□□□□□ -0.27
AP002008.3-201ENST00000528614 TSPOAP1O95153 1857 aa13.37□□□□□ -0.27
AP002008.3-201ENST00000528614 KIF20BQ96Q89 1820 aa13.37□□□□□ -0.27
AP002008.3-201ENST00000528614 ZMYM3Q14202 1370 aa13.37□□□□□ -0.27
AP002008.3-201ENST00000528614 REREQ9P2R6 1566 aa13.36□□□□□ -0.27
AP002008.3-201ENST00000528614 SPATA31D1Q6ZQQ2 1576 aa13.36□□□□□ -0.27
AP002008.3-201ENST00000528614 WASLO00401 505 aaPredicted RBP13.36□□□□□ -0.27
AP002008.3-201ENST00000528614 TMEM57Q8N5G2 664 aa13.36□□□□□ -0.27
AP002008.3-201ENST00000528614 ATP7BP35670 1465 aa13.36□□□□□ -0.27
AP002008.3-201ENST00000528614 HMOX1P09601 288 aa13.35□□□□□ -0.27
AP002008.3-201ENST00000528614 PHACTR3Q96KR7 559 aa13.35□□□□□ -0.27
AP002008.3-201ENST00000528614 IPO8O15397 1037 aaKnown RBP13.35□□□□□ -0.27
AP002008.3-201ENST00000528614 HDAC1Q13547 482 aaPredicted RBP13.35□□□□□ -0.27
AP002008.3-201ENST00000528614 TXNDC2Q86VQ3 553 aa13.35□□□□□ -0.27
AP002008.3-201ENST00000528614 EMILIN1Q9Y6C2 1016 aa13.35□□□□□ -0.27
AP002008.3-201ENST00000528614 ALDH1L2Q3SY69 923 aa13.34□□□□□ -0.27
AP002008.3-201ENST00000528614 NME9Q86XW9 330 aa13.34□□□□□ -0.27
AP002008.3-201ENST00000528614 UPF2Q9HAU5 1272 aaKnown RBP13.34□□□□□ -0.27
AP002008.3-201ENST00000528614 ZRANB1Q9UGI0 708 aa13.34□□□□□ -0.27
AP002008.3-201ENST00000528614 FAM135BQ49AJ0 1406 aa13.34□□□□□ -0.27
AP002008.3-201ENST00000528614 NFE2L2Q16236 605 aa13.34□□□□□ -0.27
AP002008.3-201ENST00000528614 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.34□□□□□ -0.27
AP002008.3-201ENST00000528614 METP08581 1390 aa13.34□□□□□ -0.27
AP002008.3-201ENST00000528614 KIF16BQ96L93 1317 aa13.34□□□□□ -0.27
AP002008.3-201ENST00000528614 BECN1Q14457 450 aa13.33□□□□□ -0.27
AP002008.3-201ENST00000528614 ZBTB40Q9NUA8 1239 aa13.33□□□□□ -0.27
AP002008.3-201ENST00000528614 LRRC7Q96NW7 1537 aa13.33□□□□□ -0.27
AP002008.3-201ENST00000528614 CDC42BPGQ6DT37 1551 aa13.33□□□□□ -0.28
AP002008.3-201ENST00000528614 CPSF1Q10570 1443 aaKnown RBP13.33□□□□□ -0.28
AP002008.3-201ENST00000528614 PPIP5K1Q6PFW1 1433 aa13.33□□□□□ -0.28
AP002008.3-201ENST00000528614 IL13P35225 146 aa13.33□□□□□ -0.28
AP002008.3-201ENST00000528614 NUDT16Q96DE0 195 aaKnown RBP13.33□□□□□ -0.28
AP002008.3-201ENST00000528614 RIMBP3CA6NJZ7 1639 aa13.33□□□□□ -0.28
AP002008.3-201ENST00000528614 RIMBP3BA6NNM3 1639 aa13.33□□□□□ -0.28
AP002008.3-201ENST00000528614 RIMBP3Q9UFD9 1639 aa13.33□□□□□ -0.28
AP002008.3-201ENST00000528614 SETD1AO15047 1707 aaKnown RBP13.33□□□□□ -0.28
AP002008.3-201ENST00000528614 FRAT2O75474 233 aaPredicted RBP13.32□□□□□ -0.28
AP002008.3-201ENST00000528614 TBC1D32Q96NH3 1257 aa13.32□□□□□ -0.28
AP002008.3-201ENST00000528614 NCKAP5LQ9HCH0 1330 aa13.32□□□□□ -0.28
AP002008.3-201ENST00000528614 GSE1Q14687 1217 aa13.32□□□□□ -0.28
AP002008.3-201ENST00000528614 THUMPD2Q9BTF0 503 aaKnown RBP13.32□□□□□ -0.28
AP002008.3-201ENST00000528614 EDC4Q6P2E9 1401 aaKnown RBP13.32□□□□□ -0.28
AP002008.3-201ENST00000528614 SMC5Q8IY18 1101 aa13.31□□□□□ -0.28
AP002008.3-201ENST00000528614 ESF1Q9H501 851 aaKnown RBP13.31□□□□□ -0.28
AP002008.3-201ENST00000528614 VAMP4O75379 141 aa13.3□□□□□ -0.28
AP002008.3-201ENST00000528614 CCDC61Q9Y6R9 512 aa13.3□□□□□ -0.28
AP002008.3-201ENST00000528614 MAP2P11137 1827 aaKnown RBP13.3□□□□□ -0.28
AP002008.3-201ENST00000528614 BRPF1P55201 1214 aaPredicted RBP13.3□□□□□ -0.28
AP002008.3-201ENST00000528614 COG3Q96JB2 828 aa13.3□□□□□ -0.28
AP002008.3-201ENST00000528614 ZNF428Q96B54 188 aa13.29□□□□□ -0.28
AP002008.3-201ENST00000528614 NRXN3Q9Y4C0 1643 aa13.29□□□□□ -0.28
AP002008.3-201ENST00000528614 HDGFP51858 240 aaKnown RBP13.29□□□□□ -0.28
AP002008.3-201ENST00000528614 CALD1Q05682 793 aaKnown RBP13.29□□□□□ -0.28
AP002008.3-201ENST00000528614 RRS1Q15050 365 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms