RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 CABP2Q9NPB3 220 aa8.56□□□□□ -1.04
MACF1-228ENST00000528611 KTN1Q86UP2 1357 aaKnown RBP8.56□□□□□ -1.04
MACF1-228ENST00000528611 TTC21AQ8NDW8 1320 aa8.55□□□□□ -1.04
MACF1-228ENST00000528611 PRR36Q9H6K5 1346 aa8.55□□□□□ -1.04
MACF1-228ENST00000528611 USP32Q8NFA0 1604 aa8.55□□□□□ -1.04
MACF1-228ENST00000528611 C11orf95C9JLR9 678 aaPredicted RBP8.55□□□□□ -1.04
MACF1-228ENST00000528611 CABP1Q9NZU7 370 aa8.55□□□□□ -1.04
MACF1-228ENST00000528611 NSD2O96028 1365 aa8.55□□□□□ -1.04
MACF1-228ENST00000528611 EDC4Q6P2E9 1401 aaKnown RBP8.54□□□□□ -1.04
MACF1-228ENST00000528611 SBNO1A3KN83 1393 aa8.54□□□□□ -1.04
MACF1-228ENST00000528611 ESCO1Q5FWF5 840 aa8.54□□□□□ -1.04
MACF1-228ENST00000528611 ACEP12821 1306 aa8.54□□□□□ -1.04
MACF1-228ENST00000528611 SOS2Q07890 1332 aaPredicted RBP8.54□□□□□ -1.04
MACF1-228ENST00000528611 PER1O15534 1290 aaPredicted RBP8.53□□□□□ -1.04
MACF1-228ENST00000528611 BRINP3Q76B58 766 aa8.53□□□□□ -1.04
MACF1-228ENST00000528611 NGDNQ8NEJ9 315 aaKnown RBP8.53□□□□□ -1.04
MACF1-228ENST00000528611 SLC12A5Q9H2X9 1139 aa8.53□□□□□ -1.04
MACF1-228ENST00000528611 USP6P35125 1406 aa8.53□□□□□ -1.04
MACF1-228ENST00000528611 SSH2Q76I76 1423 aa8.53□□□□□ -1.04
MACF1-228ENST00000528611 CGNL1Q0VF96 1302 aa8.53□□□□□ -1.04
MACF1-228ENST00000528611 MYOM1P52179 1685 aa8.53□□□□□ -1.04
MACF1-228ENST00000528611 CD163L1Q9NR16 1453 aa8.52□□□□□ -1.05
MACF1-228ENST00000528611 AHDC1Q5TGY3 1603 aaPredicted RBP8.52□□□□□ -1.05
MACF1-228ENST00000528611 SPDYE2BA6NHP3 402 aa8.52□□□□□ -1.05
MACF1-228ENST00000528611 SPDYE6P0CI01 402 aa8.52□□□□□ -1.05
MACF1-228ENST00000528611 SPDYE2Q495Y8 402 aa8.52□□□□□ -1.05
MACF1-228ENST00000528611 TMC1Q8TDI8 760 aa8.52□□□□□ -1.05
MACF1-228ENST00000528611 LRRC59Q96AG4 307 aaKnown RBP8.52□□□□□ -1.05
MACF1-228ENST00000528611 RBM33Q96EV2 1170 aaKnown RBP8.52□□□□□ -1.05
MACF1-228ENST00000528611 KNSTRNQ9Y448 316 aa8.52□□□□□ -1.05
MACF1-228ENST00000528611 AKAP12Q02952 1782 aa8.52□□□□□ -1.05
MACF1-228ENST00000528611 NHSL1Q5SYE7 1610 aa8.51□□□□□ -1.05
MACF1-228ENST00000528611 A0A1W2PP64 1363 aa8.51□□□□□ -1.05
MACF1-228ENST00000528611 ARHGEF10O15013 1369 aa8.51□□□□□ -1.05
MACF1-228ENST00000528611 USP31Q70CQ4 1352 aa8.51□□□□□ -1.05
MACF1-228ENST00000528611 UBAP1LF5GYI3 381 aa8.51□□□□□ -1.05
MACF1-228ENST00000528611 ORAI2Q96SN7 254 aa8.51□□□□□ -1.05
MACF1-228ENST00000528611 PANK3Q9H999 370 aa8.51□□□□□ -1.05
MACF1-228ENST00000528611 MON2Q7Z3U7 1717 aa8.51□□□□□ -1.05
MACF1-228ENST00000528611 RGPD8O14715 1765 aaPredicted RBP8.5□□□□□ -1.05
MACF1-228ENST00000528611 KRT28Q7Z3Y7 464 aa8.5□□□□□ -1.05
MACF1-228ENST00000528611 C19orf67A6NJJ6 358 aa8.49□□□□□ -1.05
MACF1-228ENST00000528611 FOXO3O43524 673 aa8.49□□□□□ -1.05
MACF1-228ENST00000528611 PRKAR2AP13861 404 aaKnown RBP8.49□□□□□ -1.05
MACF1-228ENST00000528611 NLRP13Q86W25 1043 aa8.49□□□□□ -1.05
MACF1-228ENST00000528611 PXDNQ92626 1479 aa8.49□□□□□ -1.05
MACF1-228ENST00000528611 USP54Q70EL1 1684 aa8.49□□□□□ -1.05
MACF1-228ENST00000528611 ROBO1Q9Y6N7 1651 aa8.49□□□□□ -1.05
MACF1-228ENST00000528611 TTC21BQ7Z4L5 1316 aa8.49□□□□□ -1.05
MACF1-228ENST00000528611 KIF24Q5T7B8 1368 aa8.48□□□□□ -1.05
MACF1-228ENST00000528611 NRKQ7Z2Y5 1582 aa8.48□□□□□ -1.05
MACF1-228ENST00000528611 RALBP1Q15311 655 aa8.48□□□□□ -1.05
MACF1-228ENST00000528611 KCNH5Q8NCM2 988 aa8.48□□□□□ -1.05
MACF1-228ENST00000528611 PMFBP1Q8TBY8 1022 aa8.48□□□□□ -1.05
MACF1-228ENST00000528611 FBXO41Q8TF61 875 aa8.48□□□□□ -1.05
MACF1-228ENST00000528611 CARD14Q9BXL6 1004 aa8.48□□□□□ -1.05
MACF1-228ENST00000528611 SPATA31A3Q5VYP0 1347 aa8.48□□□□□ -1.05
MACF1-228ENST00000528611 TNS3Q68CZ2 1445 aa8.47□□□□□ -1.05
MACF1-228ENST00000528611 NUTM2FA1L443 756 aa8.47□□□□□ -1.05
MACF1-228ENST00000528611 FYB1O15117 783 aa8.47□□□□□ -1.05
MACF1-228ENST00000528611 DDX10Q13206 875 aaKnown RBP8.47□□□□□ -1.05
MACF1-228ENST00000528611 AMER1Q5JTC6 1135 aaPredicted RBP8.47□□□□□ -1.05
MACF1-228ENST00000528611 AATKQ6ZMQ8 1374 aa8.47□□□□□ -1.05
MACF1-228ENST00000528611 NSD3Q9BZ95 1437 aa8.46□□□□□ -1.05
MACF1-228ENST00000528611 TRPM3Q9HCF6 1732 aaPredicted RBP8.46□□□□□ -1.05
MACF1-228ENST00000528611 ATXN8OSP0DMR3 200 aa8.46□□□□□ -1.06
MACF1-228ENST00000528611 ABTB2Q8N961 1025 aa8.46□□□□□ -1.06
MACF1-228ENST00000528611 COG3Q96JB2 828 aa8.46□□□□□ -1.06
MACF1-228ENST00000528611 POLR3GLQ9BT43 218 aa8.46□□□□□ -1.06
MACF1-228ENST00000528611 MED1Q15648 1581 aaPredicted RBP8.46□□□□□ -1.06
MACF1-228ENST00000528611 SPDYE1Q8NFV5 336 aaPredicted RBP8.45□□□□□ -1.06
MACF1-228ENST00000528611 ALS2Q96Q42 1657 aa8.45□□□□□ -1.06
MACF1-228ENST00000528611 USP19O94966 1318 aa8.45□□□□□ -1.06
MACF1-228ENST00000528611 SPATA31A6Q5VVP1 1343 aa8.45□□□□□ -1.06
MACF1-228ENST00000528611 OVOS2A0A0J9YW53 1432 aa8.45□□□□□ -1.06
MACF1-228ENST00000528611 OVOS2Q6IE36 1432 aa8.45□□□□□ -1.06
MACF1-228ENST00000528611 ABCC6O95255 1503 aa8.44□□□□□ -1.06
MACF1-228ENST00000528611 COL22A1Q8NFW1 1626 aaPredicted RBP8.44□□□□□ -1.06
MACF1-228ENST00000528611 ANKRD26Q9UPS8 1709 aa8.44□□□□□ -1.06
MACF1-228ENST00000528611 ANP32CO43423 234 aa8.44□□□□□ -1.06
MACF1-228ENST00000528611 PARD3Q8TEW0 1356 aa8.44□□□□□ -1.06
MACF1-228ENST00000528611 JCADQ9P266 1359 aa8.44□□□□□ -1.06
MACF1-228ENST00000528611 COL16A1Q07092 1604 aaPredicted RBP8.43□□□□□ -1.06
MACF1-228ENST00000528611 GABBR2O75899 941 aa8.43□□□□□ -1.06
MACF1-228ENST00000528611 NLRP6P59044 892 aa8.43□□□□□ -1.06
MACF1-228ENST00000528611 LHX8Q68G74 356 aa8.43□□□□□ -1.06
MACF1-228ENST00000528611 PRKRIP1Q9H875 184 aaPredicted RBP8.43□□□□□ -1.06
MACF1-228ENST00000528611 CPDO75976 1380 aa8.43□□□□□ -1.06
MACF1-228ENST00000528611 SLIT3O75094 1523 aa8.43□□□□□ -1.06
MACF1-228ENST00000528611 PHLPP1O60346 1717 aa8.43□□□□□ -1.06
MACF1-228ENST00000528611 KIF20BQ96Q89 1820 aa8.43□□□□□ -1.06
MACF1-228ENST00000528611 PAK3O75914 559 aaPredicted RBP8.42□□□□□ -1.06
MACF1-228ENST00000528611 PIP4K2BP78356 416 aa8.42□□□□□ -1.06
MACF1-228ENST00000528611 DIEXFQ68CQ4 756 aaKnown RBP8.42□□□□□ -1.06
MACF1-228ENST00000528611 MORC1Q86VD1 984 aa8.42□□□□□ -1.06
MACF1-228ENST00000528611 INSRP06213 1382 aa8.42□□□□□ -1.06
MACF1-228ENST00000528611 PHRF1Q9P1Y6 1649 aaKnown RBP8.42□□□□□ -1.06
MACF1-228ENST00000528611 SHPRHQ149N8 1683 aa8.42□□□□□ -1.06
MACF1-228ENST00000528611 PIK3C2AO00443 1686 aa8.41□□□□□ -1.06
MACF1-228ENST00000528611 RTL1A6NKG5 1358 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms