RNA–Protein interactions for RNA: ENST00000528556.5

RDX-205, Transcript of radixin, humanhuman

TSL 3

Gene RDX, Length 803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-205ENST00000528556 CD44P16070 742 aaKnown RBP11.54□□□□□ -0.56
RDX-205ENST00000528556 CADPS2Q86UW7 1296 aa11.54□□□□□ -0.56
RDX-205ENST00000528556 CCDC61Q9Y6R9 512 aa11.54□□□□□ -0.56
RDX-205ENST00000528556 NGDNQ8NEJ9 315 aaKnown RBP11.53□□□□□ -0.56
RDX-205ENST00000528556 SLC12A5Q9H2X9 1139 aa11.53□□□□□ -0.56
RDX-205ENST00000528556 PANK3Q9H999 370 aa11.53□□□□□ -0.56
RDX-205ENST00000528556 CABP1Q9NZU7 370 aa11.53□□□□□ -0.56
RDX-205ENST00000528556 KNSTRNQ9Y448 316 aa11.53□□□□□ -0.56
RDX-205ENST00000528556 NINLQ9Y2I6 1382 aa11.53□□□□□ -0.56
RDX-205ENST00000528556 PPIP5K1Q6PFW1 1433 aa11.52□□□□□ -0.56
RDX-205ENST00000528556 NCOA3Q9Y6Q9 1424 aa11.52□□□□□ -0.56
RDX-205ENST00000528556 ANP32CO43423 234 aa11.52□□□□□ -0.57
RDX-205ENST00000528556 ESCO1Q5FWF5 840 aa11.52□□□□□ -0.57
RDX-205ENST00000528556 ADGRB2O60241 1585 aa11.52□□□□□ -0.57
RDX-205ENST00000528556 STRCP1A6NGW2 1772 aa11.51□□□□□ -0.57
RDX-205ENST00000528556 LRRC7Q96NW7 1537 aa11.51□□□□□ -0.57
RDX-205ENST00000528556 PMFBP1Q8TBY8 1022 aa11.51□□□□□ -0.57
RDX-205ENST00000528556 NALCNQ8IZF0 1738 aa11.51□□□□□ -0.57
RDX-205ENST00000528556 CDC42BPGQ6DT37 1551 aa11.5□□□□□ -0.57
RDX-205ENST00000528556 IFNLR1Q8IU57 520 aaPredicted RBP11.49□□□□□ -0.57
RDX-205ENST00000528556 ANKARQ7Z5J8 1434 aa11.49□□□□□ -0.57
RDX-205ENST00000528556 PSME1Q06323 249 aa11.48□□□□□ -0.57
RDX-205ENST00000528556 PHF8Q9UPP1 1060 aa11.48□□□□□ -0.57
RDX-205ENST00000528556 PRR36Q9H6K5 1346 aa11.48□□□□□ -0.57
RDX-205ENST00000528556 KTN1Q86UP2 1357 aaKnown RBP11.48□□□□□ -0.57
RDX-205ENST00000528556 FMN2Q9NZ56 1722 aa11.48□□□□□ -0.57
RDX-205ENST00000528556 ITSN1Q15811 1721 aa11.47□□□□□ -0.57
RDX-205ENST00000528556 ATP7BP35670 1465 aa11.47□□□□□ -0.57
RDX-205ENST00000528556 DCCP43146 1447 aa11.47□□□□□ -0.57
RDX-205ENST00000528556 ANKRD36BQ8N2N9 1353 aa11.47□□□□□ -0.57
RDX-205ENST00000528556 ACEP12821 1306 aa11.47□□□□□ -0.57
RDX-205ENST00000528556 PAK3O75914 559 aaPredicted RBP11.47□□□□□ -0.57
RDX-205ENST00000528556 CC2D1BQ5T0F9 858 aaKnown RBP11.47□□□□□ -0.57
RDX-205ENST00000528556 NSD3Q9BZ95 1437 aa11.46□□□□□ -0.57
RDX-205ENST00000528556 PLEKHG3A1L390 1219 aa11.46□□□□□ -0.57
RDX-205ENST00000528556 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.46□□□□□ -0.57
RDX-205ENST00000528556 A0A1W2PP64 1363 aa11.45□□□□□ -0.58
RDX-205ENST00000528556 CGNL1Q0VF96 1302 aa11.45□□□□□ -0.58
RDX-205ENST00000528556 ORAI2Q96SN7 254 aa11.45□□□□□ -0.58
RDX-205ENST00000528556 SLAIN2Q9P270 581 aa11.45□□□□□ -0.58
RDX-205ENST00000528556 MYOM1P52179 1685 aa11.45□□□□□ -0.58
RDX-205ENST00000528556 C1orf167Q5SNV9 1468 aa11.44□□□□□ -0.58
RDX-205ENST00000528556 TOM1O60784 492 aa11.44□□□□□ -0.58
RDX-205ENST00000528556 LMOD2Q6P5Q4 547 aa11.44□□□□□ -0.58
RDX-205ENST00000528556 LTBP4Q8N2S1 1624 aa11.43□□□□□ -0.58
RDX-205ENST00000528556 FOXO3O43524 673 aa11.43□□□□□ -0.58
RDX-205ENST00000528556 MORC1Q86VD1 984 aa11.43□□□□□ -0.58
RDX-205ENST00000528556 MST1RQ04912 1400 aa11.43□□□□□ -0.58
RDX-205ENST00000528556 USP32Q8NFA0 1604 aa11.42□□□□□ -0.58
RDX-205ENST00000528556 RGPD8O14715 1765 aaPredicted RBP11.42□□□□□ -0.58
RDX-205ENST00000528556 UBAP1LF5GYI3 381 aa11.42□□□□□ -0.58
RDX-205ENST00000528556 PIP4K2BP78356 416 aa11.42□□□□□ -0.58
RDX-205ENST00000528556 CARD14Q9BXL6 1004 aa11.42□□□□□ -0.58
RDX-205ENST00000528556 CREBZFQ9NS37 354 aa11.42□□□□□ -0.58
RDX-205ENST00000528556 XIRP1Q702N8 1843 aaKnown RBP11.42□□□□□ -0.58
RDX-205ENST00000528556 TOPAZ1Q8N9V7 1692 aa11.41□□□□□ -0.58
RDX-205ENST00000528556 PLEKHG5O94827 1062 aa11.41□□□□□ -0.58
RDX-205ENST00000528556 XPCQ01831 940 aaPredicted RBP11.41□□□□□ -0.58
RDX-205ENST00000528556 KRT28Q7Z3Y7 464 aa11.41□□□□□ -0.58
RDX-205ENST00000528556 CERKQ8TCT0 537 aa11.41□□□□□ -0.58
RDX-205ENST00000528556 EDC4Q6P2E9 1401 aaKnown RBP11.41□□□□□ -0.58
RDX-205ENST00000528556 NPHP3Q7Z494 1330 aa11.4□□□□□ -0.58
RDX-205ENST00000528556 KIF1AQ12756 1690 aa11.4□□□□□ -0.58
RDX-205ENST00000528556 PER1O15534 1290 aaPredicted RBP11.4□□□□□ -0.58
RDX-205ENST00000528556 TNNT2P45379 298 aaPredicted RBP11.4□□□□□ -0.58
RDX-205ENST00000528556 RALBP1Q15311 655 aa11.4□□□□□ -0.58
RDX-205ENST00000528556 MIER1Q8N108 512 aa11.4□□□□□ -0.58
RDX-205ENST00000528556 COG3Q96JB2 828 aa11.4□□□□□ -0.58
RDX-205ENST00000528556 GGNBP2Q9H3C7 697 aa11.4□□□□□ -0.58
RDX-205ENST00000528556 TTC21BQ7Z4L5 1316 aa11.39□□□□□ -0.59
RDX-205ENST00000528556 TTC21AQ8NDW8 1320 aa11.39□□□□□ -0.59
RDX-205ENST00000528556 USP6P35125 1406 aa11.39□□□□□ -0.59
RDX-205ENST00000528556 CPSF1Q10570 1443 aaKnown RBP11.39□□□□□ -0.59
RDX-205ENST00000528556 ABTB2Q8N961 1025 aa11.39□□□□□ -0.59
RDX-205ENST00000528556 POLR3AO14802 1390 aaPredicted RBP11.39□□□□□ -0.59
RDX-205ENST00000528556 NUTM2GQ5VZR2 741 aa11.38□□□□□ -0.59
RDX-205ENST00000528556 BRINP3Q76B58 766 aa11.38□□□□□ -0.59
RDX-205ENST00000528556 NME9Q86XW9 330 aa11.38□□□□□ -0.59
RDX-205ENST00000528556 PRKRIP1Q9H875 184 aaPredicted RBP11.38□□□□□ -0.59
RDX-205ENST00000528556 NSD2O96028 1365 aa11.38□□□□□ -0.59
RDX-205ENST00000528556 CD163L1Q9NR16 1453 aa11.38□□□□□ -0.59
RDX-205ENST00000528556 AKAP12Q02952 1782 aa11.37□□□□□ -0.59
RDX-205ENST00000528556 SOX12O15370 315 aa11.37□□□□□ -0.59
RDX-205ENST00000528556 HAP1P54257 671 aaPredicted RBP11.37□□□□□ -0.59
RDX-205ENST00000528556 NLRP6P59044 892 aa11.37□□□□□ -0.59
RDX-205ENST00000528556 DDX17Q92841 729 aaKnown RBP11.37□□□□□ -0.59
RDX-205ENST00000528556 BRD4O60885 1362 aaPredicted RBP11.37□□□□□ -0.59
RDX-205ENST00000528556 MON2Q7Z3U7 1717 aa11.36□□□□□ -0.59
RDX-205ENST00000528556 SOCS7O14512 581 aa11.36□□□□□ -0.59
RDX-205ENST00000528556 FYB1O15117 783 aa11.36□□□□□ -0.59
RDX-205ENST00000528556 NLRP13Q86W25 1043 aa11.36□□□□□ -0.59
RDX-205ENST00000528556 MYBBP1AQ9BQG0 1328 aaKnown RBP11.35□□□□□ -0.59
RDX-205ENST00000528556 ZBTB7CA1YPR0 619 aa11.35□□□□□ -0.59
RDX-205ENST00000528556 ZNF579Q8NAF0 562 aaKnown RBP11.35□□□□□ -0.59
RDX-205ENST00000528556 NPC1L1Q9UHC9 1359 aa11.35□□□□□ -0.59
RDX-205ENST00000528556 IQSEC2Q5JU85 1478 aa11.35□□□□□ -0.59
RDX-205ENST00000528556 KIF20BQ96Q89 1820 aa11.35□□□□□ -0.59
RDX-205ENST00000528556 PPM1GO15355 546 aaPredicted RBP11.34□□□□□ -0.59
RDX-205ENST00000528556 CFAP53Q96M91 514 aa11.34□□□□□ -0.59
RDX-205ENST00000528556 MRS2Q9HD23 443 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms