RNA–Protein interactions for RNA: ENST00000528302.5

SF3B2-206, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5 BASIC

Gene SF3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-206ENST00000528302 TRIM44Q96DX7 344 aaPredicted RBP12.37□□□□□ -0.43
SF3B2-206ENST00000528302 POLR3AO14802 1390 aaPredicted RBP12.37□□□□□ -0.43
SF3B2-206ENST00000528302 TNPO1Q92973 898 aaKnown RBP12.36□□□□□ -0.43
SF3B2-206ENST00000528302 NLRP1Q9C000 1473 aa12.36□□□□□ -0.43
SF3B2-206ENST00000528302 TRPM2O94759 1503 aa12.36□□□□□ -0.43
SF3B2-206ENST00000528302 GAS2L3Q86XJ1 694 aa12.36□□□□□ -0.43
SF3B2-206ENST00000528302 CEP152O94986 1710 aa12.36□□□□□ -0.43
SF3B2-206ENST00000528302 RTEL1-TNFRSF6BF6WH68 1400 aa12.36□□□□□ -0.43
SF3B2-206ENST00000528302 ATAD2Q6PL18 1390 aa12.36□□□□□ -0.43
SF3B2-206ENST00000528302 GRPEL1Q9HAV7 217 aa12.36□□□□□ -0.43
SF3B2-206ENST00000528302 DDX19BQ9UMR2 479 aa12.36□□□□□ -0.43
SF3B2-206ENST00000528302 PPP6R1Q9UPN7 881 aa12.36□□□□□ -0.43
SF3B2-206ENST00000528302 SYNMO15061 1565 aa12.35□□□□□ -0.43
SF3B2-206ENST00000528302 CHAMP1Q96JM3 812 aa12.35□□□□□ -0.43
SF3B2-206ENST00000528302 SOX12O15370 315 aa12.35□□□□□ -0.43
SF3B2-206ENST00000528302 TRIM35Q9UPQ4 493 aa12.35□□□□□ -0.43
SF3B2-206ENST00000528302 PTPRTO14522 1441 aa12.34□□□□□ -0.43
SF3B2-206ENST00000528302 NPATQ14207 1427 aa12.34□□□□□ -0.43
SF3B2-206ENST00000528302 FAM69CQ0P6D2 419 aa12.34□□□□□ -0.43
SF3B2-206ENST00000528302 NUTM2FA1L443 756 aa12.34□□□□□ -0.43
SF3B2-206ENST00000528302 SSFA2P28290 1259 aa12.34□□□□□ -0.43
SF3B2-206ENST00000528302 FOXD4L6Q3SYB3 417 aaPredicted RBP12.34□□□□□ -0.43
SF3B2-206ENST00000528302 FOXD4L3Q6VB84 417 aaPredicted RBP12.34□□□□□ -0.43
SF3B2-206ENST00000528302 TSPYL6Q8N831 410 aa12.34□□□□□ -0.43
SF3B2-206ENST00000528302 DCTN1Q14203 1278 aa12.33□□□□□ -0.44
SF3B2-206ENST00000528302 VSIG10Q8N0Z9 540 aa12.33□□□□□ -0.44
SF3B2-206ENST00000528302 ERBB4Q15303 1308 aa12.33□□□□□ -0.44
SF3B2-206ENST00000528302 PRKAR2BP31323 418 aa12.33□□□□□ -0.44
SF3B2-206ENST00000528302 NOL8Q76FK4 1167 aaKnown RBP12.33□□□□□ -0.44
SF3B2-206ENST00000528302 NPC1L1Q9UHC9 1359 aa12.32□□□□□ -0.44
SF3B2-206ENST00000528302 KIDINS220Q9ULH0 1771 aa12.32□□□□□ -0.44
SF3B2-206ENST00000528302 CHD1LQ86WJ1 897 aa12.32□□□□□ -0.44
SF3B2-206ENST00000528302 EVC2Q86UK5 1308 aa12.32□□□□□ -0.44
SF3B2-206ENST00000528302 MROH2AA6NES4 1674 aa12.32□□□□□ -0.44
SF3B2-206ENST00000528302 TET3O43151 1660 aa12.32□□□□□ -0.44
SF3B2-206ENST00000528302 ABCA6Q8N139 1617 aa12.31□□□□□ -0.44
SF3B2-206ENST00000528302 KDM5AP29375 1690 aaKnown RBP12.31□□□□□ -0.44
SF3B2-206ENST00000528302 PPRC1Q5VV67 1664 aaKnown RBP12.31□□□□□ -0.44
SF3B2-206ENST00000528302 C16orf71Q8IYS4 520 aaPredicted RBP12.31□□□□□ -0.44
SF3B2-206ENST00000528302 NGEFQ8N5V2 710 aa12.31□□□□□ -0.44
SF3B2-206ENST00000528302 PRAM1Q96QH2 718 aa12.31□□□□□ -0.44
SF3B2-206ENST00000528302 C14orf93Q9H972 538 aaKnown RBP12.31□□□□□ -0.44
SF3B2-206ENST00000528302 ZNF518AQ6AHZ1 1483 aa12.31□□□□□ -0.44
SF3B2-206ENST00000528302 MRE11P49959 708 aa12.31□□□□□ -0.44
SF3B2-206ENST00000528302 ZBTB40Q9NUA8 1239 aa12.31□□□□□ -0.44
SF3B2-206ENST00000528302 YEATS2Q9ULM3 1422 aa12.3□□□□□ -0.44
SF3B2-206ENST00000528302 FAM83GA6ND36 823 aa12.3□□□□□ -0.44
SF3B2-206ENST00000528302 DIAPH1O60610 1272 aaKnown RBP12.3□□□□□ -0.44
SF3B2-206ENST00000528302 WAPLQ7Z5K2 1190 aa12.3□□□□□ -0.44
SF3B2-206ENST00000528302 MPNDQ8N594 471 aa12.3□□□□□ -0.44
SF3B2-206ENST00000528302 PHACTR3Q96KR7 559 aa12.3□□□□□ -0.44
SF3B2-206ENST00000528302 NINLQ9Y2I6 1382 aa12.3□□□□□ -0.44
SF3B2-206ENST00000528302 KIF1BO60333 1816 aa12.3□□□□□ -0.44
SF3B2-206ENST00000528302 FSD2A1L4K1 749 aa12.3□□□□□ -0.44
SF3B2-206ENST00000528302 IGSF3O75054 1194 aa12.3□□□□□ -0.44
SF3B2-206ENST00000528302 DDX49Q9Y6V7 483 aaKnown RBP12.3□□□□□ -0.44
SF3B2-206ENST00000528302 MYOM1P52179 1685 aa12.3□□□□□ -0.44
SF3B2-206ENST00000528302 ABCA9Q8IUA7 1624 aa12.3□□□□□ -0.44
SF3B2-206ENST00000528302 INO80Q9ULG1 1556 aaPredicted RBP12.3□□□□□ -0.44
SF3B2-206ENST00000528302 IQGAP1P46940 1657 aa12.3□□□□□ -0.44
SF3B2-206ENST00000528302 ESPNB1AK53 854 aa12.29□□□□□ -0.44
SF3B2-206ENST00000528302 GAS2L2Q8NHY3 880 aa12.29□□□□□ -0.44
SF3B2-206ENST00000528302 CABP1Q9NZU7 370 aa12.29□□□□□ -0.44
SF3B2-206ENST00000528302 RNF17Q9BXT8 1623 aaKnown RBP12.29□□□□□ -0.44
SF3B2-206ENST00000528302 DDX11L8A8MPP1 907 aa12.29□□□□□ -0.44
SF3B2-206ENST00000528302 HSP90AA2PQ14568 343 aaPredicted RBP12.29□□□□□ -0.44
SF3B2-206ENST00000528302 TBC1D9Q6ZT07 1266 aa12.29□□□□□ -0.44
SF3B2-206ENST00000528302 FYB1O15117 783 aa12.29□□□□□ -0.44
SF3B2-206ENST00000528302 IPO8O15397 1037 aaKnown RBP12.29□□□□□ -0.44
SF3B2-206ENST00000528302 KRT24Q2M2I5 525 aa12.29□□□□□ -0.44
SF3B2-206ENST00000528302 MCTP1Q6DN14 999 aa12.29□□□□□ -0.44
SF3B2-206ENST00000528302 ZRANB1Q9UGI0 708 aa12.29□□□□□ -0.44
SF3B2-206ENST00000528302 LAMC1P11047 1609 aa12.29□□□□□ -0.44
SF3B2-206ENST00000528302 MROH1Q8NDA8 1641 aa12.29□□□□□ -0.44
SF3B2-206ENST00000528302 SMARCA5O60264 1052 aaPredicted RBP12.28□□□□□ -0.44
SF3B2-206ENST00000528302 FGD1P98174 961 aa12.28□□□□□ -0.44
SF3B2-206ENST00000528302 SMC5Q8IY18 1101 aa12.28□□□□□ -0.44
SF3B2-206ENST00000528302 GBP4Q96PP9 640 aa12.28□□□□□ -0.44
SF3B2-206ENST00000528302 VGFO15240 615 aaPredicted RBP12.28□□□□□ -0.44
SF3B2-206ENST00000528302 HDAC1Q13547 482 aaPredicted RBP12.28□□□□□ -0.44
SF3B2-206ENST00000528302 PKP1Q13835 747 aa12.28□□□□□ -0.44
SF3B2-206ENST00000528302 OTUD7AQ8TE49 926 aaPredicted RBP12.28□□□□□ -0.44
SF3B2-206ENST00000528302 NUCB1Q02818 461 aa12.27□□□□□ -0.45
SF3B2-206ENST00000528302 ZNF692Q9BU19 519 aaPredicted RBP12.27□□□□□ -0.45
SF3B2-206ENST00000528302 MAP3K4Q9Y6R4 1608 aa12.27□□□□□ -0.45
SF3B2-206ENST00000528302 NCKAP5LQ9HCH0 1330 aa12.27□□□□□ -0.45
SF3B2-206ENST00000528302 PLEKHF1Q96S99 279 aa12.27□□□□□ -0.45
SF3B2-206ENST00000528302 RBM10P98175 930 aaKnown RBP12.26□□□□□ -0.45
SF3B2-206ENST00000528302 CAVIN1Q6NZI2 390 aaKnown RBP12.26□□□□□ -0.45
SF3B2-206ENST00000528302 STAC3Q96MF2 364 aa12.26□□□□□ -0.45
SF3B2-206ENST00000528302 EMILIN1Q9Y6C2 1016 aa12.26□□□□□ -0.45
SF3B2-206ENST00000528302 POGZQ7Z3K3 1410 aa12.26□□□□□ -0.45
SF3B2-206ENST00000528302 EFCAB6Q5THR3 1501 aa12.26□□□□□ -0.45
SF3B2-206ENST00000528302 A0A1W2PP64 1363 aa12.26□□□□□ -0.45
SF3B2-206ENST00000528302 DTNBO60941 627 aa12.26□□□□□ -0.45
SF3B2-206ENST00000528302 RRS1Q15050 365 aaKnown RBP12.26□□□□□ -0.45
SF3B2-206ENST00000528302 CCDC27Q2M243 656 aa12.26□□□□□ -0.45
SF3B2-206ENST00000528302 TSHZ3Q63HK5 1081 aa12.26□□□□□ -0.45
SF3B2-206ENST00000528302 TSPOAP1O95153 1857 aa12.25□□□□□ -0.45
SF3B2-206ENST00000528302 CLCN1P35523 988 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms