RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 KIF2CQ99661 725 aa18.27■□□□□ 0.51
CAPN1-214ENST00000528165 TRAK1Q9UPV9 953 aa18.27■□□□□ 0.51
CAPN1-214ENST00000528165 ADGRB2O60241 1585 aa18.26■□□□□ 0.51
CAPN1-214ENST00000528165 AFAP1Q8N556 730 aa18.26■□□□□ 0.51
CAPN1-214ENST00000528165 DDX49Q9Y6V7 483 aaKnown RBP18.26■□□□□ 0.51
CAPN1-214ENST00000528165 DEPDC5O75140 1603 aa18.25■□□□□ 0.51
CAPN1-214ENST00000528165 KIF16BQ96L93 1317 aa18.25■□□□□ 0.51
CAPN1-214ENST00000528165 CD2BP2O95400 341 aaKnown RBP18.25■□□□□ 0.51
CAPN1-214ENST00000528165 SSFA2P28290 1259 aa18.25■□□□□ 0.51
CAPN1-214ENST00000528165 UGGT1Q9NYU2 1555 aa18.25■□□□□ 0.51
CAPN1-214ENST00000528165 OFD1O75665 1012 aa18.24■□□□□ 0.51
CAPN1-214ENST00000528165 KLHL40Q2TBA0 621 aa18.24■□□□□ 0.51
CAPN1-214ENST00000528165 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.24■□□□□ 0.51
CAPN1-214ENST00000528165 ABCC11Q96J66 1382 aa18.24■□□□□ 0.51
CAPN1-214ENST00000528165 IBTKQ9P2D0 1353 aaPredicted RBP18.24■□□□□ 0.51
CAPN1-214ENST00000528165 USP32Q8NFA0 1604 aa18.24■□□□□ 0.51
CAPN1-214ENST00000528165 TMPOP42166 694 aaKnown RBP18.23■□□□□ 0.51
CAPN1-214ENST00000528165 ZFYVE16Q7Z3T8 1539 aa18.23■□□□□ 0.51
CAPN1-214ENST00000528165 U2SURPO15042 1029 aaKnown RBP18.22■□□□□ 0.51
CAPN1-214ENST00000528165 KIF3BO15066 747 aa18.22■□□□□ 0.51
CAPN1-214ENST00000528165 NOS1P29475 1434 aa18.22■□□□□ 0.51
CAPN1-214ENST00000528165 CLEC17AQ6ZS10 378 aa18.22■□□□□ 0.51
CAPN1-214ENST00000528165 ANKRD45Q5TZF3 282 aa18.22■□□□□ 0.51
CAPN1-214ENST00000528165 TRIM35Q9UPQ4 493 aa18.22■□□□□ 0.51
CAPN1-214ENST00000528165 KIF1BO60333 1816 aa18.22■□□□□ 0.51
CAPN1-214ENST00000528165 BAG4O95429 457 aaKnown RBP18.21■□□□□ 0.51
CAPN1-214ENST00000528165 GAS2L2Q8NHY3 880 aa18.21■□□□□ 0.51
CAPN1-214ENST00000528165 NSD2O96028 1365 aa18.21■□□□□ 0.51
CAPN1-214ENST00000528165 NRXN1Q9ULB1 1477 aa18.21■□□□□ 0.51
CAPN1-214ENST00000528165 IL16Q14005 1332 aa18.21■□□□□ 0.5
CAPN1-214ENST00000528165 CFAP74Q9C0B2 1584 aa18.2■□□□□ 0.5
CAPN1-214ENST00000528165 TBC1D9Q6ZT07 1266 aa18.2■□□□□ 0.5
CAPN1-214ENST00000528165 RBM42Q9BTD8 480 aaKnown RBP18.2■□□□□ 0.5
CAPN1-214ENST00000528165 CD109Q6YHK3 1445 aa18.2■□□□□ 0.5
CAPN1-214ENST00000528165 VWDEQ8N2E2 1590 aa18.2■□□□□ 0.5
CAPN1-214ENST00000528165 PLEKHF1Q96S99 279 aa18.2■□□□□ 0.5
CAPN1-214ENST00000528165 TERF1P54274 439 aa18.19■□□□□ 0.5
CAPN1-214ENST00000528165 SETBP1Q9Y6X0 1596 aa18.19■□□□□ 0.5
CAPN1-214ENST00000528165 GCC1Q96CN9 775 aa18.19■□□□□ 0.5
CAPN1-214ENST00000528165 QRICH2Q9H0J4 1663 aa18.19■□□□□ 0.5
CAPN1-214ENST00000528165 IFT172Q9UG01 1749 aa18.19■□□□□ 0.5
CAPN1-214ENST00000528165 CHGAP10645 457 aaKnown RBP18.18■□□□□ 0.5
CAPN1-214ENST00000528165 ZNF445P59923 1031 aa18.17■□□□□ 0.5
CAPN1-214ENST00000528165 ALDH1L2Q3SY69 923 aa18.17■□□□□ 0.5
CAPN1-214ENST00000528165 ANKRD36BQ8N2N9 1353 aa18.17■□□□□ 0.5
CAPN1-214ENST00000528165 NCLP19338 710 aaKnown RBP18.17■□□□□ 0.5
CAPN1-214ENST00000528165 CALD1Q05682 793 aaKnown RBP18.17■□□□□ 0.5
CAPN1-214ENST00000528165 HS1BP3Q53T59 392 aa18.17■□□□□ 0.5
CAPN1-214ENST00000528165 ZC3H13Q5T200 1668 aaKnown RBP18.16■□□□□ 0.5
CAPN1-214ENST00000528165 RIPK4P57078 832 aa18.16■□□□□ 0.5
CAPN1-214ENST00000528165 MCTP1Q6DN14 999 aa18.16■□□□□ 0.5
CAPN1-214ENST00000528165 CHMP4BQ9H444 224 aaKnown RBP18.16■□□□□ 0.5
CAPN1-214ENST00000528165 RBM10P98175 930 aaKnown RBP18.15■□□□□ 0.5
CAPN1-214ENST00000528165 CAVIN1Q6NZI2 390 aaKnown RBP18.15■□□□□ 0.5
CAPN1-214ENST00000528165 MROH2AA6NES4 1674 aa18.15■□□□□ 0.5
CAPN1-214ENST00000528165 TMEM132EQ6IEE7 984 aa18.15■□□□□ 0.5
CAPN1-214ENST00000528165 C14orf93Q9H972 538 aaKnown RBP18.15■□□□□ 0.5
CAPN1-214ENST00000528165 R3HCC1Q9Y3T6 440 aaKnown RBP18.15■□□□□ 0.5
CAPN1-214ENST00000528165 INO80Q9ULG1 1556 aaPredicted RBP18.15■□□□□ 0.5
CAPN1-214ENST00000528165 CDC45O75419 566 aa18.14■□□□□ 0.5
CAPN1-214ENST00000528165 NUCB2P80303 420 aa18.14■□□□□ 0.5
CAPN1-214ENST00000528165 EVC2Q86UK5 1308 aa18.14■□□□□ 0.49
CAPN1-214ENST00000528165 PPIP5K1Q6PFW1 1433 aa18.14■□□□□ 0.49
CAPN1-214ENST00000528165 ZSCAN23Q3MJ62 389 aa18.13■□□□□ 0.49
CAPN1-214ENST00000528165 MAP7D2Q96T17 732 aa18.13■□□□□ 0.49
CAPN1-214ENST00000528165 NOL7Q9UMY1 257 aaKnown RBP18.13■□□□□ 0.49
CAPN1-214ENST00000528165 ATP7AQ04656 1500 aa18.13■□□□□ 0.49
CAPN1-214ENST00000528165 FAM13BQ9NYF5 915 aa18.13■□□□□ 0.49
CAPN1-214ENST00000528165 ARHGAP31Q2M1Z3 1444 aa18.12■□□□□ 0.49
CAPN1-214ENST00000528165 RABEP1Q15276 862 aa18.12■□□□□ 0.49
CAPN1-214ENST00000528165 ZBTB7BO15156 539 aaPredicted RBP18.12■□□□□ 0.49
CAPN1-214ENST00000528165 PUS7Q96PZ0 661 aaKnown RBP18.12■□□□□ 0.49
CAPN1-214ENST00000528165 C1orf115Q9H7X2 142 aa18.12■□□□□ 0.49
CAPN1-214ENST00000528165 ZNF500O60304 480 aaPredicted RBP18.11■□□□□ 0.49
CAPN1-214ENST00000528165 MED14O60244 1454 aa18.11■□□□□ 0.49
CAPN1-214ENST00000528165 EFCAB6Q5THR3 1501 aa18.1■□□□□ 0.49
CAPN1-214ENST00000528165 RBSNQ9H1K0 784 aa18.1■□□□□ 0.49
CAPN1-214ENST00000528165 LMBRD1Q9NUN5 540 aa18.1■□□□□ 0.49
CAPN1-214ENST00000528165 ADGRB1O14514 1584 aa18.1■□□□□ 0.49
CAPN1-214ENST00000528165 ZNF428Q96B54 188 aa18.09■□□□□ 0.49
CAPN1-214ENST00000528165 PDLIM2Q96JY6 352 aa18.09■□□□□ 0.49
CAPN1-214ENST00000528165 ADGRB3O60242 1522 aa18.09■□□□□ 0.49
CAPN1-214ENST00000528165 ZCCHC11Q5TAX3 1644 aaKnown RBP18.08■□□□□ 0.49
CAPN1-214ENST00000528165 XPCQ01831 940 aaPredicted RBP18.08■□□□□ 0.49
CAPN1-214ENST00000528165 CFAP44Q96MT7 982 aa18.08■□□□□ 0.49
CAPN1-214ENST00000528165 AK9Q5TCS8 1911 aa18.08■□□□□ 0.49
CAPN1-214ENST00000528165 BRPF1P55201 1214 aaPredicted RBP18.08■□□□□ 0.48
CAPN1-214ENST00000528165 GGNBP2Q9H3C7 697 aa18.08■□□□□ 0.48
CAPN1-214ENST00000528165 CABP2Q9NPB3 220 aa18.08■□□□□ 0.48
CAPN1-214ENST00000528165 MROH1Q8NDA8 1641 aa18.08■□□□□ 0.48
CAPN1-214ENST00000528165 PRIM1P49642 420 aaKnown RBP18.08■□□□□ 0.48
CAPN1-214ENST00000528165 FANCAO15360 1455 aa18.07■□□□□ 0.48
CAPN1-214ENST00000528165 UQCRHLA0A096LP55 91 aa18.07■□□□□ 0.48
CAPN1-214ENST00000528165 CYP2E1P05181 493 aaPredicted RBP18.07■□□□□ 0.48
CAPN1-214ENST00000528165 UQCRHP07919 91 aa18.07■□□□□ 0.48
CAPN1-214ENST00000528165 COL3A1P02461 1466 aaPredicted RBP18.07■□□□□ 0.48
CAPN1-214ENST00000528165 CSPP1Q1MSJ5 1256 aa18.07■□□□□ 0.48
CAPN1-214ENST00000528165 REREQ9P2R6 1566 aa18.06■□□□□ 0.48
CAPN1-214ENST00000528165 ARAP3Q8WWN8 1544 aa18.06■□□□□ 0.48
CAPN1-214ENST00000528165 CWC22Q9HCG8 908 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms