RNA–Protein interactions for RNA: ENST00000527646.5

VPS51-204, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS51, Length 2,144 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-204ENST00000527646 CCDC61Q9Y6R9 512 aa24.41■■□□□ 1.5
VPS51-204ENST00000527646 NEFMP07197 916 aa24.4■■□□□ 1.5
VPS51-204ENST00000527646 SLC26A8Q96RN1 970 aa24.39■■□□□ 1.49
VPS51-204ENST00000527646 CPSF1Q10570 1443 aaKnown RBP24.39■■□□□ 1.49
VPS51-204ENST00000527646 E9PSI1 815 aa24.38■■□□□ 1.49
VPS51-204ENST00000527646 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.38■■□□□ 1.49
VPS51-204ENST00000527646 EDC4Q6P2E9 1401 aaKnown RBP24.38■■□□□ 1.49
VPS51-204ENST00000527646 U2AF1L5P0DN76 240 aaPredicted RBP24.37■■□□□ 1.49
VPS51-204ENST00000527646 U2AF1Q01081 240 aaKnown RBP eCLIP24.37■■□□□ 1.49
VPS51-204ENST00000527646 DDRGK1Q96HY6 314 aa24.37■■□□□ 1.49
VPS51-204ENST00000527646 TBX22Q9Y458 520 aa24.37■■□□□ 1.49
VPS51-204ENST00000527646 ADGRB2O60241 1585 aa24.36■■□□□ 1.49
VPS51-204ENST00000527646 CDC42BPGQ6DT37 1551 aa24.36■■□□□ 1.49
VPS51-204ENST00000527646 TRMT2AQ8IZ69 625 aaKnown RBP24.35■■□□□ 1.49
VPS51-204ENST00000527646 DIP2AQ14689 1571 aa24.35■■□□□ 1.49
VPS51-204ENST00000527646 WWC1Q8IX03 1113 aa24.34■■□□□ 1.49
VPS51-204ENST00000527646 TCP11L2Q8N4U5 519 aa24.34■■□□□ 1.49
VPS51-204ENST00000527646 IQSEC2Q5JU85 1478 aa24.33■■□□□ 1.49
VPS51-204ENST00000527646 NKTRP30414 1462 aaKnown RBP24.33■■□□□ 1.49
VPS51-204ENST00000527646 RIMS1Q86UR5 1692 aaKnown RBP24.32■■□□□ 1.48
VPS51-204ENST00000527646 ZNF692Q9BU19 519 aaPredicted RBP24.32■■□□□ 1.48
VPS51-204ENST00000527646 CEP170BQ9Y4F5 1589 aaPredicted RBP24.32■■□□□ 1.48
VPS51-204ENST00000527646 PTPRUQ92729 1446 aa24.32■■□□□ 1.48
VPS51-204ENST00000527646 AMOTL2Q9Y2J4 779 aa24.32■■□□□ 1.48
VPS51-204ENST00000527646 LAS1LQ9Y4W2 734 aaKnown RBP24.32■■□□□ 1.48
VPS51-204ENST00000527646 COL3A1P02461 1466 aaPredicted RBP24.31■■□□□ 1.48
VPS51-204ENST00000527646 SPINK5Q9NQ38 1064 aaPredicted RBP24.31■■□□□ 1.48
VPS51-204ENST00000527646 ITSN1Q15811 1721 aa24.31■■□□□ 1.48
VPS51-204ENST00000527646 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.31■■□□□ 1.48
VPS51-204ENST00000527646 U2SURPO15042 1029 aaKnown RBP24.31■■□□□ 1.48
VPS51-204ENST00000527646 NEUROD2Q15784 382 aa24.31■■□□□ 1.48
VPS51-204ENST00000527646 CRBNQ96SW2 442 aa24.31■■□□□ 1.48
VPS51-204ENST00000527646 MON2Q7Z3U7 1717 aa24.3■■□□□ 1.48
VPS51-204ENST00000527646 NCBP3Q53F19 620 aaKnown RBP24.3■■□□□ 1.48
VPS51-204ENST00000527646 PTCH1Q13635 1447 aa24.3■■□□□ 1.48
VPS51-204ENST00000527646 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.29■■□□□ 1.48
VPS51-204ENST00000527646 DIAPH1O60610 1272 aaKnown RBP24.29■■□□□ 1.48
VPS51-204ENST00000527646 CCDC27Q2M243 656 aa24.29■■□□□ 1.48
VPS51-204ENST00000527646 C20orf194Q5TEA3 1177 aa24.29■■□□□ 1.48
VPS51-204ENST00000527646 PNPLA6Q8IY17 1366 aa24.29■■□□□ 1.48
VPS51-204ENST00000527646 PRR36Q9H6K5 1346 aa24.28■■□□□ 1.48
VPS51-204ENST00000527646 RRP7AQ9Y3A4 280 aaKnown RBP24.28■■□□□ 1.48
VPS51-204ENST00000527646 AKAP12Q02952 1782 aa24.28■■□□□ 1.48
VPS51-204ENST00000527646 NCKAP5LQ9HCH0 1330 aa24.28■■□□□ 1.48
VPS51-204ENST00000527646 IL27Q8NEV9 243 aa24.28■■□□□ 1.48
VPS51-204ENST00000527646 WDR63Q8IWG1 891 aa24.26■■□□□ 1.47
VPS51-204ENST00000527646 PHF23Q9BUL5 403 aaPredicted RBP24.26■■□□□ 1.47
VPS51-204ENST00000527646 PNNQ9H307 717 aaKnown RBP24.26■■□□□ 1.47
VPS51-204ENST00000527646 DMRT2Q9Y5R5 561 aa24.26■■□□□ 1.47
VPS51-204ENST00000527646 PRKCSHP14314 528 aaPredicted RBP24.26■■□□□ 1.47
VPS51-204ENST00000527646 COG3Q96JB2 828 aa24.26■■□□□ 1.47
VPS51-204ENST00000527646 NME9Q86XW9 330 aa24.25■■□□□ 1.47
VPS51-204ENST00000527646 MAPK8IP3Q9UPT6 1336 aa24.24■■□□□ 1.47
VPS51-204ENST00000527646 POLKQ9UBT6 870 aa24.24■■□□□ 1.47
VPS51-204ENST00000527646 TOPAZ1Q8N9V7 1692 aa24.23■■□□□ 1.47
VPS51-204ENST00000527646 ANO8Q9HCE9 1232 aaPredicted RBP24.23■■□□□ 1.47
VPS51-204ENST00000527646 MAP2P11137 1827 aaKnown RBP24.22■■□□□ 1.47
VPS51-204ENST00000527646 PIK3R4Q99570 1358 aa24.22■■□□□ 1.47
VPS51-204ENST00000527646 PLEKHG3A1L390 1219 aa24.22■■□□□ 1.47
VPS51-204ENST00000527646 AATKQ6ZMQ8 1374 aa24.21■■□□□ 1.47
VPS51-204ENST00000527646 ADAMTSL3P82987 1691 aa24.21■■□□□ 1.47
VPS51-204ENST00000527646 PLEKHF1Q96S99 279 aa24.21■■□□□ 1.47
VPS51-204ENST00000527646 NUTM2FA1L443 756 aa24.2■■□□□ 1.46
VPS51-204ENST00000527646 DNAJC5Q9H3Z4 198 aa24.2■■□□□ 1.46
VPS51-204ENST00000527646 ACEP12821 1306 aa24.2■■□□□ 1.46
VPS51-204ENST00000527646 XRN1Q8IZH2 1706 aaKnown RBP24.2■■□□□ 1.46
VPS51-204ENST00000527646 ZNF142P52746 1687 aaPredicted RBP24.19■■□□□ 1.46
VPS51-204ENST00000527646 ANKLE2Q86XL3 938 aa24.19■■□□□ 1.46
VPS51-204ENST00000527646 CDK12Q9NYV4 1490 aaPredicted RBP24.17■■□□□ 1.46
VPS51-204ENST00000527646 FCHSD2O94868 740 aa24.17■■□□□ 1.46
VPS51-204ENST00000527646 FBLN1P23142 703 aa24.17■■□□□ 1.46
VPS51-204ENST00000527646 MYH16Q9H6N6 1097 aa24.17■■□□□ 1.46
VPS51-204ENST00000527646 TTC21BQ7Z4L5 1316 aa24.16■■□□□ 1.46
VPS51-204ENST00000527646 GSE1Q14687 1217 aa24.16■■□□□ 1.46
VPS51-204ENST00000527646 ZRANB1Q9UGI0 708 aa24.16■■□□□ 1.46
VPS51-204ENST00000527646 TMPOP42166 694 aaKnown RBP24.16■■□□□ 1.46
VPS51-204ENST00000527646 EMILIN1Q9Y6C2 1016 aa24.16■■□□□ 1.46
VPS51-204ENST00000527646 NRKQ7Z2Y5 1582 aa24.15■■□□□ 1.46
VPS51-204ENST00000527646 USP6P35125 1406 aa24.15■■□□□ 1.46
VPS51-204ENST00000527646 SETD1BQ9UPS6 1966 aaKnown RBP24.15■■□□□ 1.46
VPS51-204ENST00000527646 KCNA6P17658 529 aa24.14■■□□□ 1.45
VPS51-204ENST00000527646 BCAR3O75815 825 aa24.13■■□□□ 1.45
VPS51-204ENST00000527646 CENPQQ7L2Z9 268 aaPredicted RBP24.13■■□□□ 1.45
VPS51-204ENST00000527646 KDM2BQ8NHM5 1336 aa24.12■■□□□ 1.45
VPS51-204ENST00000527646 DAXXQ9UER7 740 aaPredicted RBP24.12■■□□□ 1.45
VPS51-204ENST00000527646 LRRC7Q96NW7 1537 aa24.1■■□□□ 1.45
VPS51-204ENST00000527646 RRS1Q15050 365 aaKnown RBP24.1■■□□□ 1.45
VPS51-204ENST00000527646 NFKBIBQ15653 356 aa24.1■■□□□ 1.45
VPS51-204ENST00000527646 RSPH6AQ9H0K4 717 aa24.1■■□□□ 1.45
VPS51-204ENST00000527646 RIPK4P57078 832 aa24.09■■□□□ 1.45
VPS51-204ENST00000527646 RTN4Q9NQC3 1192 aaKnown RBP24.09■■□□□ 1.45
VPS51-204ENST00000527646 ANKARQ7Z5J8 1434 aa24.09■■□□□ 1.45
VPS51-204ENST00000527646 PRKAR2BP31323 418 aa24.08■■□□□ 1.45
VPS51-204ENST00000527646 SKAP1Q86WV1 359 aa24.08■■□□□ 1.45
VPS51-204ENST00000527646 NGDNQ8NEJ9 315 aaKnown RBP24.08■■□□□ 1.45
VPS51-204ENST00000527646 TTC21AQ8NDW8 1320 aa24.08■■□□□ 1.45
VPS51-204ENST00000527646 IL13P35225 146 aa24.08■■□□□ 1.45
VPS51-204ENST00000527646 PMFBP1Q8TBY8 1022 aa24.08■■□□□ 1.45
VPS51-204ENST00000527646 TRIM35Q9UPQ4 493 aa24.08■■□□□ 1.45
VPS51-204ENST00000527646 OVOS2A0A0J9YW53 1432 aa24.08■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms