RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 PER1O15534 1290 aaPredicted RBP14.99□□□□□ -0.01
NEDD8-205ENST00000527046 PNPLA6Q8IY17 1366 aa14.98□□□□□ -0.01
NEDD8-205ENST00000527046 ANKRD36BQ8N2N9 1353 aa14.98□□□□□ -0.01
NEDD8-205ENST00000527046 TTC21BQ7Z4L5 1316 aa14.98□□□□□ -0.01
NEDD8-205ENST00000527046 KTN1Q86UP2 1357 aaKnown RBP14.98□□□□□ -0.01
NEDD8-205ENST00000527046 POLR3GLQ9BT43 218 aa14.97□□□□□ -0.01
NEDD8-205ENST00000527046 PANK3Q9H999 370 aa14.97□□□□□ -0.01
NEDD8-205ENST00000527046 ZRANB1Q9UGI0 708 aa14.97□□□□□ -0.01
NEDD8-205ENST00000527046 BRD4O60885 1362 aaPredicted RBP14.97□□□□□ -0.01
NEDD8-205ENST00000527046 TNS3Q68CZ2 1445 aa14.96□□□□□ -0.01
NEDD8-205ENST00000527046 TERF2IPQ9NYB0 399 aa14.96□□□□□ -0.01
NEDD8-205ENST00000527046 MARF1Q9Y4F3 1742 aaKnown RBP14.96□□□□□ -0.01
NEDD8-205ENST00000527046 COL22A1Q8NFW1 1626 aaPredicted RBP14.95□□□□□ -0.02
NEDD8-205ENST00000527046 MED1Q15648 1581 aaPredicted RBP14.94□□□□□ -0.02
NEDD8-205ENST00000527046 PIK3C2AO00443 1686 aa14.94□□□□□ -0.02
NEDD8-205ENST00000527046 SHPRHQ149N8 1683 aa14.94□□□□□ -0.02
NEDD8-205ENST00000527046 HDGFL2Q7Z4V5 671 aaPredicted RBP14.94□□□□□ -0.02
NEDD8-205ENST00000527046 NME9Q86XW9 330 aa14.94□□□□□ -0.02
NEDD8-205ENST00000527046 JCADQ9P266 1359 aa14.94□□□□□ -0.02
NEDD8-205ENST00000527046 CRYBG1Q9Y4K1 1723 aa14.94□□□□□ -0.02
NEDD8-205ENST00000527046 EDC4Q6P2E9 1401 aaKnown RBP14.93□□□□□ -0.02
NEDD8-205ENST00000527046 FYB1O15117 783 aa14.93□□□□□ -0.02
NEDD8-205ENST00000527046 CABLES1Q8TDN4 633 aa14.93□□□□□ -0.02
NEDD8-205ENST00000527046 PAK3O75914 559 aaPredicted RBP14.92□□□□□ -0.02
NEDD8-205ENST00000527046 NUTM2GQ5VZR2 741 aa14.92□□□□□ -0.02
NEDD8-205ENST00000527046 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.92□□□□□ -0.02
NEDD8-205ENST00000527046 USP31Q70CQ4 1352 aa14.92□□□□□ -0.02
NEDD8-205ENST00000527046 TTC21AQ8NDW8 1320 aa14.92□□□□□ -0.02
NEDD8-205ENST00000527046 ZNF316A6NFI3 1004 aaPredicted RBP14.91□□□□□ -0.02
NEDD8-205ENST00000527046 ABTB2Q8N961 1025 aa14.91□□□□□ -0.02
NEDD8-205ENST00000527046 LRP6O75581 1613 aa14.91□□□□□ -0.02
NEDD8-205ENST00000527046 USP19O94966 1318 aa14.91□□□□□ -0.02
NEDD8-205ENST00000527046 NSD3Q9BZ95 1437 aa14.9□□□□□ -0.02
NEDD8-205ENST00000527046 USP54Q70EL1 1684 aa14.9□□□□□ -0.02
NEDD8-205ENST00000527046 ARHGEF10O15013 1369 aa14.89□□□□□ -0.03
NEDD8-205ENST00000527046 NLRP6P59044 892 aa14.89□□□□□ -0.03
NEDD8-205ENST00000527046 AMER1Q5JTC6 1135 aaPredicted RBP14.89□□□□□ -0.03
NEDD8-205ENST00000527046 ABCA3Q99758 1704 aa14.89□□□□□ -0.03
NEDD8-205ENST00000527046 LMOD2Q6P5Q4 547 aa14.88□□□□□ -0.03
NEDD8-205ENST00000527046 GGNBP2Q9H3C7 697 aa14.88□□□□□ -0.03
NEDD8-205ENST00000527046 OVOS2A0A0J9YW53 1432 aa14.88□□□□□ -0.03
NEDD8-205ENST00000527046 OVOS2Q6IE36 1432 aa14.88□□□□□ -0.03
NEDD8-205ENST00000527046 SPATA31A6Q5VVP1 1343 aa14.88□□□□□ -0.03
NEDD8-205ENST00000527046 FBLN1P23142 703 aa14.87□□□□□ -0.03
NEDD8-205ENST00000527046 NLRP13Q86W25 1043 aa14.87□□□□□ -0.03
NEDD8-205ENST00000527046 SLIT3O75094 1523 aa14.87□□□□□ -0.03
NEDD8-205ENST00000527046 DDX10Q13206 875 aaKnown RBP14.86□□□□□ -0.03
NEDD8-205ENST00000527046 PHRF1Q9P1Y6 1649 aaKnown RBP14.85□□□□□ -0.03
NEDD8-205ENST00000527046 NUTM2BA6NNL0 878 aaPredicted RBP14.85□□□□□ -0.03
NEDD8-205ENST00000527046 NUTM2EB1AL46 878 aaPredicted RBP14.85□□□□□ -0.03
NEDD8-205ENST00000527046 GCP02774 474 aa14.85□□□□□ -0.03
NEDD8-205ENST00000527046 NUTM2AQ8IVF1 878 aaPredicted RBP14.85□□□□□ -0.03
NEDD8-205ENST00000527046 PLEKHG5O94827 1062 aa14.84□□□□□ -0.03
NEDD8-205ENST00000527046 KIF20BQ96Q89 1820 aa14.84□□□□□ -0.03
NEDD8-205ENST00000527046 NFAT5O94916 1531 aa14.83□□□□□ -0.04
NEDD8-205ENST00000527046 FAM83GA6ND36 823 aa14.83□□□□□ -0.04
NEDD8-205ENST00000527046 CGNL1Q0VF96 1302 aa14.82□□□□□ -0.04
NEDD8-205ENST00000527046 COL18A1P39060 1754 aa14.82□□□□□ -0.04
NEDD8-205ENST00000527046 ADAMTS2O95450 1211 aa14.81□□□□□ -0.04
NEDD8-205ENST00000527046 ZC3H6P61129 1189 aaKnown RBP14.81□□□□□ -0.04
NEDD8-205ENST00000527046 ARHGEF25Q86VW2 580 aa14.81□□□□□ -0.04
NEDD8-205ENST00000527046 RGS17Q9UGC6 210 aaPredicted RBP14.81□□□□□ -0.04
NEDD8-205ENST00000527046 KNSTRNQ9Y448 316 aa14.81□□□□□ -0.04
NEDD8-205ENST00000527046 NPC1L1Q9UHC9 1359 aa14.81□□□□□ -0.04
NEDD8-205ENST00000527046 COG3Q96JB2 828 aa14.8□□□□□ -0.04
NEDD8-205ENST00000527046 CPDO75976 1380 aa14.8□□□□□ -0.04
NEDD8-205ENST00000527046 ANKRD26Q9UPS8 1709 aa14.8□□□□□ -0.04
NEDD8-205ENST00000527046 KIAA0232Q92628 1395 aa14.79□□□□□ -0.04
NEDD8-205ENST00000527046 AXIN2Q9Y2T1 843 aa14.79□□□□□ -0.04
NEDD8-205ENST00000527046 FNBP4Q8N3X1 1017 aaPredicted RBP14.78□□□□□ -0.04
NEDD8-205ENST00000527046 SLIT2O94813 1529 aa14.77□□□□□ -0.04
NEDD8-205ENST00000527046 BCL9LQ86UU0 1499 aa14.77□□□□□ -0.04
NEDD8-205ENST00000527046 NSD2O96028 1365 aa14.77□□□□□ -0.04
NEDD8-205ENST00000527046 CHRNA2Q15822 529 aa14.77□□□□□ -0.05
NEDD8-205ENST00000527046 CC2D1BQ5T0F9 858 aaKnown RBP14.77□□□□□ -0.05
NEDD8-205ENST00000527046 KCNH5Q8NCM2 988 aa14.77□□□□□ -0.05
NEDD8-205ENST00000527046 LMO7Q8WWI1 1683 aa14.77□□□□□ -0.05
NEDD8-205ENST00000527046 CAMTA1Q9Y6Y1 1673 aa14.77□□□□□ -0.05
NEDD8-205ENST00000527046 MAP3K19Q56UN5 1328 aa14.76□□□□□ -0.05
NEDD8-205ENST00000527046 SOX12O15370 315 aa14.76□□□□□ -0.05
NEDD8-205ENST00000527046 POLKQ9UBT6 870 aa14.76□□□□□ -0.05
NEDD8-205ENST00000527046 PEAK1Q9H792 1746 aa14.75□□□□□ -0.05
NEDD8-205ENST00000527046 AATKQ6ZMQ8 1374 aa14.75□□□□□ -0.05
NEDD8-205ENST00000527046 RRS1Q15050 365 aaKnown RBP14.75□□□□□ -0.05
NEDD8-205ENST00000527046 MAP2P11137 1827 aaKnown RBP14.75□□□□□ -0.05
NEDD8-205ENST00000527046 RGPD5Q99666 1765 aa14.75□□□□□ -0.05
NEDD8-205ENST00000527046 C8orf37Q96NL8 207 aa14.74□□□□□ -0.05
NEDD8-205ENST00000527046 LTN1O94822 1766 aa14.74□□□□□ -0.05
NEDD8-205ENST00000527046 COL14A1Q05707 1796 aaKnown RBP14.73□□□□□ -0.05
NEDD8-205ENST00000527046 MORC1Q86VD1 984 aa14.73□□□□□ -0.05
NEDD8-205ENST00000527046 NGLY1Q96IV0 654 aa14.73□□□□□ -0.05
NEDD8-205ENST00000527046 PRDM11Q9NQV5 511 aa14.73□□□□□ -0.05
NEDD8-205ENST00000527046 EMILIN1Q9Y6C2 1016 aa14.73□□□□□ -0.05
NEDD8-205ENST00000527046 AFF2P51816 1311 aa14.72□□□□□ -0.05
NEDD8-205ENST00000527046 PLCH1Q4KWH8 1693 aa14.72□□□□□ -0.05
NEDD8-205ENST00000527046 TNNT2P45379 298 aaPredicted RBP14.72□□□□□ -0.05
NEDD8-205ENST00000527046 HAP1P54257 671 aaPredicted RBP14.72□□□□□ -0.05
NEDD8-205ENST00000527046 IP6K1Q92551 441 aa14.72□□□□□ -0.05
NEDD8-205ENST00000527046 BTG4Q9NY30 223 aa14.72□□□□□ -0.05
NEDD8-205ENST00000527046 NRAPQ86VF7 1730 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms