RNA–Protein interactions for RNA: ENST00000527028.5

PDZD3-206, Transcript of PDZ domain containing 3, humanhuman

TSL 2

Gene PDZD3, Length 2,522 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-206ENST00000527028 ZNF692Q9BU19 519 aaPredicted RBP23.37■■□□□ 1.33
PDZD3-206ENST00000527028 MED14O60244 1454 aa23.36■■□□□ 1.33
PDZD3-206ENST00000527028 CHGAP10645 457 aaKnown RBP23.36■■□□□ 1.33
PDZD3-206ENST00000527028 DDIT3P35638 169 aa23.36■■□□□ 1.33
PDZD3-206ENST00000527028 TMPOP42166 694 aaKnown RBP23.36■■□□□ 1.33
PDZD3-206ENST00000527028 SSH1Q8WYL5 1049 aa23.36■■□□□ 1.33
PDZD3-206ENST00000527028 TSR2Q969E8 191 aaKnown RBP23.36■■□□□ 1.33
PDZD3-206ENST00000527028 PIK3C2BO00750 1634 aa23.36■■□□□ 1.33
PDZD3-206ENST00000527028 KIF16BQ96L93 1317 aa23.36■■□□□ 1.33
PDZD3-206ENST00000527028 ITPRIPQ8IWB1 547 aa23.36■■□□□ 1.33
PDZD3-206ENST00000527028 TMEM132EQ6IEE7 984 aa23.35■■□□□ 1.33
PDZD3-206ENST00000527028 ZBTB40Q9NUA8 1239 aa23.35■■□□□ 1.33
PDZD3-206ENST00000527028 TRIM35Q9UPQ4 493 aa23.35■■□□□ 1.33
PDZD3-206ENST00000527028 CAMSAP1Q5T5Y3 1602 aa23.34■■□□□ 1.33
PDZD3-206ENST00000527028 CLCN1P35523 988 aa23.34■■□□□ 1.33
PDZD3-206ENST00000527028 SPRYD3Q8NCJ5 442 aa23.33■■□□□ 1.33
PDZD3-206ENST00000527028 CIZ1Q9ULV3 898 aaPredicted RBP23.33■■□□□ 1.33
PDZD3-206ENST00000527028 IPO8O15397 1037 aaKnown RBP23.33■■□□□ 1.33
PDZD3-206ENST00000527028 FRMPD1Q5SYB0 1578 aa23.33■■□□□ 1.33
PDZD3-206ENST00000527028 NEXMIFQ5QGS0 1516 aa23.33■■□□□ 1.32
PDZD3-206ENST00000527028 NUCB1Q02818 461 aa23.32■■□□□ 1.32
PDZD3-206ENST00000527028 CFAP74Q9C0B2 1584 aa23.31■■□□□ 1.32
PDZD3-206ENST00000527028 CFAP65Q6ZU64 1925 aaKnown RBP23.31■■□□□ 1.32
PDZD3-206ENST00000527028 NOB1Q9ULX3 412 aaKnown RBP23.31■■□□□ 1.32
PDZD3-206ENST00000527028 ABCC3O15438 1527 aa23.31■■□□□ 1.32
PDZD3-206ENST00000527028 A0A1W2PP64 1363 aa23.3■■□□□ 1.32
PDZD3-206ENST00000527028 ALDH1L2Q3SY69 923 aa23.3■■□□□ 1.32
PDZD3-206ENST00000527028 MLH3Q9UHC1 1453 aa23.3■■□□□ 1.32
PDZD3-206ENST00000527028 TMEM57Q8N5G2 664 aa23.29■■□□□ 1.32
PDZD3-206ENST00000527028 PNNQ9H307 717 aaKnown RBP23.29■■□□□ 1.32
PDZD3-206ENST00000527028 VGFO15240 615 aaPredicted RBP23.29■■□□□ 1.32
PDZD3-206ENST00000527028 OSCARQ8IYS5 282 aa23.29■■□□□ 1.32
PDZD3-206ENST00000527028 GZF1Q9H116 711 aaPredicted RBP23.29■■□□□ 1.32
PDZD3-206ENST00000527028 PTMSP20962 102 aa23.28■■□□□ 1.32
PDZD3-206ENST00000527028 BRPF1P55201 1214 aaPredicted RBP23.28■■□□□ 1.32
PDZD3-206ENST00000527028 ZNF428Q96B54 188 aa23.28■■□□□ 1.32
PDZD3-206ENST00000527028 PANK2Q9BZ23 570 aa23.28■■□□□ 1.32
PDZD3-206ENST00000527028 CDC42BPGQ6DT37 1551 aa23.28■■□□□ 1.32
PDZD3-206ENST00000527028 CLTCQ00610 1675 aaKnown RBP23.27■■□□□ 1.32
PDZD3-206ENST00000527028 REREQ9P2R6 1566 aa23.27■■□□□ 1.32
PDZD3-206ENST00000527028 BMP2KLQ5H9B9 411 aa23.26■■□□□ 1.31
PDZD3-206ENST00000527028 ASXL2Q76L83 1435 aa23.26■■□□□ 1.31
PDZD3-206ENST00000527028 GRPEL1Q9HAV7 217 aa23.26■■□□□ 1.31
PDZD3-206ENST00000527028 ZFYVE9O95405 1425 aa23.26■■□□□ 1.31
PDZD3-206ENST00000527028 PPIP5K1Q6PFW1 1433 aa23.26■■□□□ 1.31
PDZD3-206ENST00000527028 U2SURPO15042 1029 aaKnown RBP23.26■■□□□ 1.31
PDZD3-206ENST00000527028 SIGLEC1Q9BZZ2 1709 aa23.26■■□□□ 1.31
PDZD3-206ENST00000527028 POGZQ7Z3K3 1410 aa23.25■■□□□ 1.31
PDZD3-206ENST00000527028 PNPLA6Q8IY17 1366 aa23.25■■□□□ 1.31
PDZD3-206ENST00000527028 CABP2Q9NPB3 220 aa23.25■■□□□ 1.31
PDZD3-206ENST00000527028 ATAD2Q6PL18 1390 aa23.25■■□□□ 1.31
PDZD3-206ENST00000527028 CHD1LQ86WJ1 897 aa23.24■■□□□ 1.31
PDZD3-206ENST00000527028 CHMP4BQ9H444 224 aaKnown RBP23.24■■□□□ 1.31
PDZD3-206ENST00000527028 GBP4Q96PP9 640 aa23.24■■□□□ 1.31
PDZD3-206ENST00000527028 SKOR2Q2VWA4 1001 aaPredicted RBP23.23■■□□□ 1.31
PDZD3-206ENST00000527028 RIPK4P57078 832 aa23.23■■□□□ 1.31
PDZD3-206ENST00000527028 RAB3GAP1Q15042 981 aa23.22■■□□□ 1.31
PDZD3-206ENST00000527028 ARXQ96QS3 562 aa23.22■■□□□ 1.31
PDZD3-206ENST00000527028 GCC1Q96CN9 775 aa23.21■■□□□ 1.31
PDZD3-206ENST00000527028 TNPO1Q92973 898 aaKnown RBP23.21■■□□□ 1.31
PDZD3-206ENST00000527028 PIK3R4Q99570 1358 aa23.21■■□□□ 1.31
PDZD3-206ENST00000527028 TERF2IPQ9NYB0 399 aa23.2■■□□□ 1.3
PDZD3-206ENST00000527028 CD163L1Q9NR16 1453 aa23.2■■□□□ 1.3
PDZD3-206ENST00000527028 KIF20BQ96Q89 1820 aa23.19■■□□□ 1.3
PDZD3-206ENST00000527028 GGNBP2Q9H3C7 697 aa23.19■■□□□ 1.3
PDZD3-206ENST00000527028 DIAPH1O60610 1272 aaKnown RBP23.19■■□□□ 1.3
PDZD3-206ENST00000527028 HSP90AB1P08238 724 aaKnown RBP23.19■■□□□ 1.3
PDZD3-206ENST00000527028 LNPKQ9C0E8 428 aa23.19■■□□□ 1.3
PDZD3-206ENST00000527028 FYB1O15117 783 aa23.18■■□□□ 1.3
PDZD3-206ENST00000527028 ARHGAP45Q92619 1136 aa23.18■■□□□ 1.3
PDZD3-206ENST00000527028 PTCH1Q13635 1447 aa23.18■■□□□ 1.3
PDZD3-206ENST00000527028 ARHGAP31Q2M1Z3 1444 aa23.18■■□□□ 1.3
PDZD3-206ENST00000527028 LRRC7Q96NW7 1537 aa23.18■■□□□ 1.3
PDZD3-206ENST00000527028 PTPRMP28827 1452 aa23.17■■□□□ 1.3
PDZD3-206ENST00000527028 GGT6Q6P531 493 aa23.17■■□□□ 1.3
PDZD3-206ENST00000527028 FCHSD2O94868 740 aa23.17■■□□□ 1.3
PDZD3-206ENST00000527028 KIF2CQ99661 725 aa23.17■■□□□ 1.3
PDZD3-206ENST00000527028 FAM135BQ49AJ0 1406 aa23.16■■□□□ 1.3
PDZD3-206ENST00000527028 SRPK2P78362 688 aaKnown RBP23.15■■□□□ 1.3
PDZD3-206ENST00000527028 ESPNB1AK53 854 aa23.14■■□□□ 1.3
PDZD3-206ENST00000527028 CLEC17AQ6ZS10 378 aa23.14■■□□□ 1.3
PDZD3-206ENST00000527028 ZBTB7BO15156 539 aaPredicted RBP23.14■■□□□ 1.29
PDZD3-206ENST00000527028 K7ELQ4 463 aaPredicted RBP23.13■■□□□ 1.29
PDZD3-206ENST00000527028 NAP1L5Q96NT1 182 aaPredicted RBP23.13■■□□□ 1.29
PDZD3-206ENST00000527028 IBTKQ9P2D0 1353 aaPredicted RBP23.12■■□□□ 1.29
PDZD3-206ENST00000527028 CALD1Q05682 793 aaKnown RBP23.11■■□□□ 1.29
PDZD3-206ENST00000527028 CFAP44Q96MT7 982 aa23.11■■□□□ 1.29
PDZD3-206ENST00000527028 ANKRD45Q5TZF3 282 aa23.1■■□□□ 1.29
PDZD3-206ENST00000527028 TBC1D9Q6ZT07 1266 aa23.09■■□□□ 1.29
PDZD3-206ENST00000527028 HDGFL2Q7Z4V5 671 aaPredicted RBP23.09■■□□□ 1.29
PDZD3-206ENST00000527028 MRPL50Q8N5N7 158 aaKnown RBP23.09■■□□□ 1.29
PDZD3-206ENST00000527028 TRIM44Q96DX7 344 aaPredicted RBP23.09■■□□□ 1.29
PDZD3-206ENST00000527028 HSP90AA1P07900 732 aaKnown RBP23.08■■□□□ 1.29
PDZD3-206ENST00000527028 ABCC4O15439 1325 aa23.08■■□□□ 1.29
PDZD3-206ENST00000527028 GAS2L3Q86XJ1 694 aa23.08■■□□□ 1.28
PDZD3-206ENST00000527028 SLC52A1Q9NWF4 448 aa23.08■■□□□ 1.28
PDZD3-206ENST00000527028 SAFB2Q14151 953 aaKnown RBP eCLIP23.07■■□□□ 1.28
PDZD3-206ENST00000527028 GOLGA6L22H0YM25 854 aa23.07■■□□□ 1.28
PDZD3-206ENST00000527028 VAMP4O75379 141 aa23.07■■□□□ 1.28
PDZD3-206ENST00000527028 NUTM2DQ5VT03 806 aaPredicted RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms