RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 ZKSCAN2Q63HK3 967 aa14.9□□□□□ -0.02
LINC01001-201ENST00000526704 RWDD1Q9H446 243 aaPredicted RBP14.9□□□□□ -0.02
LINC01001-201ENST00000526704 ALKQ9UM73 1620 aa14.9□□□□□ -0.02
LINC01001-201ENST00000526704 TRIM35Q9UPQ4 493 aa14.9□□□□□ -0.02
LINC01001-201ENST00000526704 SLC52A1Q9NWF4 448 aa14.89□□□□□ -0.03
LINC01001-201ENST00000526704 TMPOP42166 694 aaKnown RBP14.89□□□□□ -0.03
LINC01001-201ENST00000526704 SENP3Q9H4L4 574 aaPredicted RBP14.89□□□□□ -0.03
LINC01001-201ENST00000526704 U2SURPO15042 1029 aaKnown RBP14.88□□□□□ -0.03
LINC01001-201ENST00000526704 EXOSC9Q06265 439 aaKnown RBP14.88□□□□□ -0.03
LINC01001-201ENST00000526704 OSCARQ8IYS5 282 aa14.88□□□□□ -0.03
LINC01001-201ENST00000526704 DZIP1LQ8IYY4 767 aaKnown RBP14.88□□□□□ -0.03
LINC01001-201ENST00000526704 LRRC7Q96NW7 1537 aa14.88□□□□□ -0.03
LINC01001-201ENST00000526704 MINK1Q8N4C8 1332 aaPredicted RBP14.88□□□□□ -0.03
LINC01001-201ENST00000526704 FTSJ3Q8IY81 847 aaKnown RBP14.88□□□□□ -0.03
LINC01001-201ENST00000526704 SETD1AO15047 1707 aaKnown RBP14.88□□□□□ -0.03
LINC01001-201ENST00000526704 FYB1O15117 783 aa14.87□□□□□ -0.03
LINC01001-201ENST00000526704 ARHGEF40Q8TER5 1519 aa14.87□□□□□ -0.03
LINC01001-201ENST00000526704 SMC4Q9NTJ3 1288 aa14.87□□□□□ -0.03
LINC01001-201ENST00000526704 MAP2P11137 1827 aaKnown RBP14.87□□□□□ -0.03
LINC01001-201ENST00000526704 BECN1Q14457 450 aa14.86□□□□□ -0.03
LINC01001-201ENST00000526704 TBC1D32Q96NH3 1257 aa14.86□□□□□ -0.03
LINC01001-201ENST00000526704 PRAM1Q96QH2 718 aa14.86□□□□□ -0.03
LINC01001-201ENST00000526704 TRIM27P14373 513 aa14.86□□□□□ -0.03
LINC01001-201ENST00000526704 TERF2IPQ9NYB0 399 aa14.86□□□□□ -0.03
LINC01001-201ENST00000526704 PNPLA6Q8IY17 1366 aa14.86□□□□□ -0.03
LINC01001-201ENST00000526704 RIMBP3CA6NJZ7 1639 aa14.86□□□□□ -0.03
LINC01001-201ENST00000526704 RIMBP3BA6NNM3 1639 aa14.86□□□□□ -0.03
LINC01001-201ENST00000526704 RIMBP3Q9UFD9 1639 aa14.86□□□□□ -0.03
LINC01001-201ENST00000526704 IL16Q14005 1332 aa14.86□□□□□ -0.03
LINC01001-201ENST00000526704 SSH1Q8WYL5 1049 aa14.85□□□□□ -0.03
LINC01001-201ENST00000526704 UPF2Q9HAU5 1272 aaKnown RBP14.83□□□□□ -0.04
LINC01001-201ENST00000526704 POGKQ9P215 609 aa14.83□□□□□ -0.04
LINC01001-201ENST00000526704 BRPF3Q9ULD4 1205 aa14.83□□□□□ -0.04
LINC01001-201ENST00000526704 HDAC1Q13547 482 aaPredicted RBP14.82□□□□□ -0.04
LINC01001-201ENST00000526704 ATF7IPQ6VMQ6 1270 aa14.82□□□□□ -0.04
LINC01001-201ENST00000526704 DLC1Q96QB1 1528 aa14.82□□□□□ -0.04
LINC01001-201ENST00000526704 DIAPH1O60610 1272 aaKnown RBP14.82□□□□□ -0.04
LINC01001-201ENST00000526704 ANTXR1Q9H6X2 564 aa14.82□□□□□ -0.04
LINC01001-201ENST00000526704 DDX19BQ9UMR2 479 aa14.82□□□□□ -0.04
LINC01001-201ENST00000526704 DLG5Q8TDM6 1919 aa14.82□□□□□ -0.04
LINC01001-201ENST00000526704 RIPK4P57078 832 aa14.81□□□□□ -0.04
LINC01001-201ENST00000526704 FAM135BQ49AJ0 1406 aa14.81□□□□□ -0.04
LINC01001-201ENST00000526704 ITPRIPQ8IWB1 547 aa14.81□□□□□ -0.04
LINC01001-201ENST00000526704 SLKQ9H2G2 1235 aaPredicted RBP14.81□□□□□ -0.04
LINC01001-201ENST00000526704 RTN4Q9NQC3 1192 aaKnown RBP14.81□□□□□ -0.04
LINC01001-201ENST00000526704 NOB1Q9ULX3 412 aaKnown RBP14.81□□□□□ -0.04
LINC01001-201ENST00000526704 HDGFL2Q7Z4V5 671 aaPredicted RBP14.8□□□□□ -0.04
LINC01001-201ENST00000526704 CDK19Q9BWU1 502 aa14.8□□□□□ -0.04
LINC01001-201ENST00000526704 ATP7BP35670 1465 aa14.8□□□□□ -0.04
LINC01001-201ENST00000526704 TBC1D2Q9BYX2 928 aa14.8□□□□□ -0.04
LINC01001-201ENST00000526704 FBXO31Q5XUX0 539 aaPredicted RBP14.8□□□□□ -0.04
LINC01001-201ENST00000526704 TMEM57Q8N5G2 664 aa14.8□□□□□ -0.04
LINC01001-201ENST00000526704 CABP1Q9NZU7 370 aa14.79□□□□□ -0.04
LINC01001-201ENST00000526704 KIF16BQ96L93 1317 aa14.78□□□□□ -0.04
LINC01001-201ENST00000526704 SMC5Q8IY18 1101 aa14.78□□□□□ -0.04
LINC01001-201ENST00000526704 PPIP5K1Q6PFW1 1433 aa14.78□□□□□ -0.04
LINC01001-201ENST00000526704 ZBTB40Q9NUA8 1239 aa14.78□□□□□ -0.04
LINC01001-201ENST00000526704 REREQ9P2R6 1566 aa14.77□□□□□ -0.04
LINC01001-201ENST00000526704 NRXN3Q9Y4C0 1643 aa14.77□□□□□ -0.04
LINC01001-201ENST00000526704 RSPH6AQ9H0K4 717 aa14.77□□□□□ -0.04
LINC01001-201ENST00000526704 PNNQ9H307 717 aaKnown RBP14.77□□□□□ -0.04
LINC01001-201ENST00000526704 MON2Q7Z3U7 1717 aa14.77□□□□□ -0.05
LINC01001-201ENST00000526704 SPATA31D1Q6ZQQ2 1576 aa14.76□□□□□ -0.05
LINC01001-201ENST00000526704 A2ML1A8K2U0 1454 aa14.76□□□□□ -0.05
LINC01001-201ENST00000526704 FCHSD2O94868 740 aa14.76□□□□□ -0.05
LINC01001-201ENST00000526704 ALDH1L2Q3SY69 923 aa14.76□□□□□ -0.05
LINC01001-201ENST00000526704 TSPOAP1O95153 1857 aa14.76□□□□□ -0.05
LINC01001-201ENST00000526704 PRKAR2BP31323 418 aa14.75□□□□□ -0.05
LINC01001-201ENST00000526704 AKAP12Q02952 1782 aa14.75□□□□□ -0.05
LINC01001-201ENST00000526704 C22orf23Q9BZE7 217 aa14.75□□□□□ -0.05
LINC01001-201ENST00000526704 POLKQ9UBT6 870 aa14.75□□□□□ -0.05
LINC01001-201ENST00000526704 IPO8O15397 1037 aaKnown RBP14.74□□□□□ -0.05
LINC01001-201ENST00000526704 FBLN1P23142 703 aa14.74□□□□□ -0.05
LINC01001-201ENST00000526704 MFAP1P55081 439 aaKnown RBP14.74□□□□□ -0.05
LINC01001-201ENST00000526704 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.74□□□□□ -0.05
LINC01001-201ENST00000526704 ITSN1Q15811 1721 aa14.74□□□□□ -0.05
LINC01001-201ENST00000526704 KNDC1Q76NI1 1749 aa14.74□□□□□ -0.05
LINC01001-201ENST00000526704 AGLP35573 1532 aa14.73□□□□□ -0.05
LINC01001-201ENST00000526704 CDK12Q9NYV4 1490 aaPredicted RBP14.73□□□□□ -0.05
LINC01001-201ENST00000526704 PTCH1Q13635 1447 aa14.73□□□□□ -0.05
LINC01001-201ENST00000526704 RIMS2Q9UQ26 1411 aa14.73□□□□□ -0.05
LINC01001-201ENST00000526704 DIP2BQ9P265 1576 aa14.72□□□□□ -0.05
LINC01001-201ENST00000526704 BRPF1P55201 1214 aaPredicted RBP14.72□□□□□ -0.05
LINC01001-201ENST00000526704 NUCB1Q02818 461 aa14.72□□□□□ -0.05
LINC01001-201ENST00000526704 WAPLQ7Z5K2 1190 aa14.72□□□□□ -0.05
LINC01001-201ENST00000526704 C3P01024 1663 aa14.72□□□□□ -0.05
LINC01001-201ENST00000526704 CPSF1Q10570 1443 aaKnown RBP14.72□□□□□ -0.05
LINC01001-201ENST00000526704 PHACTR3Q96KR7 559 aa14.72□□□□□ -0.05
LINC01001-201ENST00000526704 PIK3R4Q99570 1358 aa14.72□□□□□ -0.05
LINC01001-201ENST00000526704 EDC4Q6P2E9 1401 aaKnown RBP14.71□□□□□ -0.05
LINC01001-201ENST00000526704 NFE2L2Q16236 605 aa14.71□□□□□ -0.05
LINC01001-201ENST00000526704 STAG3Q9UJ98 1225 aa14.71□□□□□ -0.05
LINC01001-201ENST00000526704 HMOX1P09601 288 aa14.7□□□□□ -0.06
LINC01001-201ENST00000526704 ZNF428Q96B54 188 aa14.7□□□□□ -0.06
LINC01001-201ENST00000526704 SPRYD3Q8NCJ5 442 aa14.69□□□□□ -0.06
LINC01001-201ENST00000526704 THUMPD2Q9BTF0 503 aaKnown RBP14.69□□□□□ -0.06
LINC01001-201ENST00000526704 EMILIN1Q9Y6C2 1016 aa14.69□□□□□ -0.06
LINC01001-201ENST00000526704 NRKQ7Z2Y5 1582 aa14.69□□□□□ -0.06
LINC01001-201ENST00000526704 CPS1P31327 1500 aa14.69□□□□□ -0.06
LINC01001-201ENST00000526704 MRPL50Q8N5N7 158 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms