RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 HAP1P54257 671 aaPredicted RBP22.79■■□□□ 1.24
SSSCA1-202ENST00000526433 PUS7Q96PZ0 661 aaKnown RBP22.79■■□□□ 1.24
SSSCA1-202ENST00000526433 ALS2Q96Q42 1657 aa22.78■■□□□ 1.24
SSSCA1-202ENST00000526433 ZNF692Q9BU19 519 aaPredicted RBP22.78■■□□□ 1.24
SSSCA1-202ENST00000526433 TMC1Q8TDI8 760 aa22.76■■□□□ 1.23
SSSCA1-202ENST00000526433 TMF1P82094 1093 aa22.75■■□□□ 1.23
SSSCA1-202ENST00000526433 NUTM2GQ5VZR2 741 aa22.75■■□□□ 1.23
SSSCA1-202ENST00000526433 ABTB2Q8N961 1025 aa22.75■■□□□ 1.23
SSSCA1-202ENST00000526433 FNBP4Q8N3X1 1017 aaPredicted RBP22.74■■□□□ 1.23
SSSCA1-202ENST00000526433 SLC12A5Q9H2X9 1139 aa22.74■■□□□ 1.23
SSSCA1-202ENST00000526433 BRD4O60885 1362 aaPredicted RBP22.74■■□□□ 1.23
SSSCA1-202ENST00000526433 MARF1Q9Y4F3 1742 aaKnown RBP22.74■■□□□ 1.23
SSSCA1-202ENST00000526433 USP6P35125 1406 aa22.73■■□□□ 1.23
SSSCA1-202ENST00000526433 USP21Q9UK80 565 aa22.72■■□□□ 1.23
SSSCA1-202ENST00000526433 EIF4G2P78344 907 aaKnown RBP eCLIP22.71■■□□□ 1.23
SSSCA1-202ENST00000526433 QTRT2Q9H974 415 aaKnown RBP22.71■■□□□ 1.23
SSSCA1-202ENST00000526433 CPSF1Q10570 1443 aaKnown RBP22.71■■□□□ 1.23
SSSCA1-202ENST00000526433 AKAP12Q02952 1782 aa22.69■■□□□ 1.22
SSSCA1-202ENST00000526433 SSH2Q76I76 1423 aa22.69■■□□□ 1.22
SSSCA1-202ENST00000526433 KTN1Q86UP2 1357 aaKnown RBP22.69■■□□□ 1.22
SSSCA1-202ENST00000526433 TTC21BQ7Z4L5 1316 aa22.69■■□□□ 1.22
SSSCA1-202ENST00000526433 HSPA5P11021 654 aaKnown RBP22.69■■□□□ 1.22
SSSCA1-202ENST00000526433 NLRP13Q86W25 1043 aa22.69■■□□□ 1.22
SSSCA1-202ENST00000526433 ABCA3Q99758 1704 aa22.68■■□□□ 1.22
SSSCA1-202ENST00000526433 FAM83GA6ND36 823 aa22.68■■□□□ 1.22
SSSCA1-202ENST00000526433 CDCA8Q53HL2 280 aa22.68■■□□□ 1.22
SSSCA1-202ENST00000526433 HDGFL2Q7Z4V5 671 aaPredicted RBP22.68■■□□□ 1.22
SSSCA1-202ENST00000526433 NLRP6P59044 892 aa22.67■■□□□ 1.22
SSSCA1-202ENST00000526433 TERF2IPQ9NYB0 399 aa22.67■■□□□ 1.22
SSSCA1-202ENST00000526433 RXRBP28702 533 aa22.66■■□□□ 1.22
SSSCA1-202ENST00000526433 CD163L1Q9NR16 1453 aa22.66■■□□□ 1.22
SSSCA1-202ENST00000526433 BCL9LQ86UU0 1499 aa22.65■■□□□ 1.22
SSSCA1-202ENST00000526433 CRYBG1Q9Y4K1 1723 aa22.65■■□□□ 1.22
SSSCA1-202ENST00000526433 TTC21AQ8NDW8 1320 aa22.64■■□□□ 1.22
SSSCA1-202ENST00000526433 UNC5CLQ8IV45 518 aa22.64■■□□□ 1.21
SSSCA1-202ENST00000526433 TRPC5Q9UL62 973 aaPredicted RBP22.64■■□□□ 1.21
SSSCA1-202ENST00000526433 USP19O94966 1318 aa22.63■■□□□ 1.21
SSSCA1-202ENST00000526433 ZC3H6P61129 1189 aaKnown RBP22.63■■□□□ 1.21
SSSCA1-202ENST00000526433 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.63■■□□□ 1.21
SSSCA1-202ENST00000526433 NINLQ9Y2I6 1382 aa22.63■■□□□ 1.21
SSSCA1-202ENST00000526433 SLIT2O94813 1529 aa22.62■■□□□ 1.21
SSSCA1-202ENST00000526433 RBM6P78332 1123 aaKnown RBP22.62■■□□□ 1.21
SSSCA1-202ENST00000526433 GCP02774 474 aa22.61■■□□□ 1.21
SSSCA1-202ENST00000526433 MON2Q7Z3U7 1717 aa22.61■■□□□ 1.21
SSSCA1-202ENST00000526433 PRDM11Q9NQV5 511 aa22.61■■□□□ 1.21
SSSCA1-202ENST00000526433 A0A1W2PP64 1363 aa22.61■■□□□ 1.21
SSSCA1-202ENST00000526433 SOCS7O14512 581 aa22.6■■□□□ 1.21
SSSCA1-202ENST00000526433 KIAA0232Q92628 1395 aa22.6■■□□□ 1.21
SSSCA1-202ENST00000526433 PHRF1Q9P1Y6 1649 aaKnown RBP22.6■■□□□ 1.21
SSSCA1-202ENST00000526433 ATRNO75882 1429 aa22.59■■□□□ 1.21
SSSCA1-202ENST00000526433 BTG4Q9NY30 223 aa22.59■■□□□ 1.21
SSSCA1-202ENST00000526433 PIK3C2AO00443 1686 aa22.58■■□□□ 1.21
SSSCA1-202ENST00000526433 CHRNA2Q15822 529 aa22.58■■□□□ 1.21
SSSCA1-202ENST00000526433 ZRANB1Q9UGI0 708 aa22.58■■□□□ 1.21
SSSCA1-202ENST00000526433 NME9Q86XW9 330 aa22.57■■□□□ 1.2
SSSCA1-202ENST00000526433 POLR3GLQ9BT43 218 aa22.57■■□□□ 1.2
SSSCA1-202ENST00000526433 NRKQ7Z2Y5 1582 aa22.57■■□□□ 1.2
SSSCA1-202ENST00000526433 EDC4Q6P2E9 1401 aaKnown RBP22.57■■□□□ 1.2
SSSCA1-202ENST00000526433 COL14A1Q05707 1796 aaKnown RBP22.56■■□□□ 1.2
SSSCA1-202ENST00000526433 PLCH1Q4KWH8 1693 aa22.56■■□□□ 1.2
SSSCA1-202ENST00000526433 GJD4Q96KN9 370 aaPredicted RBP22.56■■□□□ 1.2
SSSCA1-202ENST00000526433 ANKRD36BQ8N2N9 1353 aa22.55■■□□□ 1.2
SSSCA1-202ENST00000526433 NWD2Q9ULI1 1742 aa22.55■■□□□ 1.2
SSSCA1-202ENST00000526433 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.54■■□□□ 1.2
SSSCA1-202ENST00000526433 VPS72Q15906 364 aa22.54■■□□□ 1.2
SSSCA1-202ENST00000526433 CPDO75976 1380 aa22.53■■□□□ 1.2
SSSCA1-202ENST00000526433 USP31Q70CQ4 1352 aa22.53■■□□□ 1.2
SSSCA1-202ENST00000526433 KCNH5Q8NCM2 988 aa22.53■■□□□ 1.2
SSSCA1-202ENST00000526433 CCDC9Q9Y3X0 531 aaKnown RBP22.53■■□□□ 1.2
SSSCA1-202ENST00000526433 SLIT3O75094 1523 aa22.52■■□□□ 1.2
SSSCA1-202ENST00000526433 ZBTB7CA1YPR0 619 aa22.52■■□□□ 1.2
SSSCA1-202ENST00000526433 SOX12O15370 315 aa22.52■■□□□ 1.2
SSSCA1-202ENST00000526433 C11orf95C9JLR9 678 aaPredicted RBP22.51■■□□□ 1.19
SSSCA1-202ENST00000526433 CDK12Q9NYV4 1490 aaPredicted RBP22.51■■□□□ 1.19
SSSCA1-202ENST00000526433 EVA1CP58658 441 aa22.49■■□□□ 1.19
SSSCA1-202ENST00000526433 CARD14Q9BXL6 1004 aa22.49■■□□□ 1.19
SSSCA1-202ENST00000526433 ARHGEF25Q86VW2 580 aa22.48■■□□□ 1.19
SSSCA1-202ENST00000526433 STRN4Q9NRL3 753 aa22.48■■□□□ 1.19
SSSCA1-202ENST00000526433 NRAPQ86VF7 1730 aa22.48■■□□□ 1.19
SSSCA1-202ENST00000526433 MYOM1P52179 1685 aa22.47■■□□□ 1.19
SSSCA1-202ENST00000526433 CAMTA1Q9Y6Y1 1673 aa22.46■■□□□ 1.19
SSSCA1-202ENST00000526433 FYB1O15117 783 aa22.46■■□□□ 1.19
SSSCA1-202ENST00000526433 RGS12O14924 1447 aa22.46■■□□□ 1.19
SSSCA1-202ENST00000526433 GLI3P10071 1580 aa22.46■■□□□ 1.19
SSSCA1-202ENST00000526433 COG3Q96JB2 828 aa22.45■■□□□ 1.18
SSSCA1-202ENST00000526433 AATKQ6ZMQ8 1374 aa22.45■■□□□ 1.18
SSSCA1-202ENST00000526433 SPATA31A5Q5VU36 1347 aa22.44■■□□□ 1.18
SSSCA1-202ENST00000526433 USP54Q70EL1 1684 aa22.44■■□□□ 1.18
SSSCA1-202ENST00000526433 SPATA31A7Q8IWB4 1347 aa22.44■■□□□ 1.18
SSSCA1-202ENST00000526433 ONECUT3O60422 494 aaPredicted RBP22.43■■□□□ 1.18
SSSCA1-202ENST00000526433 GGNBP2Q9H3C7 697 aa22.43■■□□□ 1.18
SSSCA1-202ENST00000526433 AXIN2Q9Y2T1 843 aa22.43■■□□□ 1.18
SSSCA1-202ENST00000526433 LMO7Q8WWI1 1683 aa22.42■■□□□ 1.18
SSSCA1-202ENST00000526433 NFAT5O94916 1531 aa22.42■■□□□ 1.18
SSSCA1-202ENST00000526433 OVOS2A0A0J9YW53 1432 aa22.42■■□□□ 1.18
SSSCA1-202ENST00000526433 OVOS2Q6IE36 1432 aa22.42■■□□□ 1.18
SSSCA1-202ENST00000526433 LARP1Q6PKG0 1096 aaKnown RBP22.42■■□□□ 1.18
SSSCA1-202ENST00000526433 COL18A1P39060 1754 aa22.41■■□□□ 1.18
SSSCA1-202ENST00000526433 PANK3Q9H999 370 aa22.41■■□□□ 1.18
SSSCA1-202ENST00000526433 SPATA31A1Q5TZJ5 1347 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms