RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 C11orf95C9JLR9 678 aaPredicted RBP17.15■□□□□ 0.34
CCS-202ENST00000525435 NLRP13Q86W25 1043 aa17.15■□□□□ 0.34
CCS-202ENST00000525435 TTC21BQ7Z4L5 1316 aa17.15■□□□□ 0.34
CCS-202ENST00000525435 ANKRD36BQ8N2N9 1353 aa17.15■□□□□ 0.34
CCS-202ENST00000525435 ILDR2Q71H61 639 aa17.14■□□□□ 0.33
CCS-202ENST00000525435 CD163L1Q9NR16 1453 aa17.13■□□□□ 0.33
CCS-202ENST00000525435 SHPRHQ149N8 1683 aa17.13■□□□□ 0.33
CCS-202ENST00000525435 A0A1W2PP64 1363 aa17.13■□□□□ 0.33
CCS-202ENST00000525435 NUTM2BA6NNL0 878 aaPredicted RBP17.12■□□□□ 0.33
CCS-202ENST00000525435 NUTM2EB1AL46 878 aaPredicted RBP17.12■□□□□ 0.33
CCS-202ENST00000525435 NUTM2AQ8IVF1 878 aaPredicted RBP17.12■□□□□ 0.33
CCS-202ENST00000525435 EDC4Q6P2E9 1401 aaKnown RBP17.12■□□□□ 0.33
CCS-202ENST00000525435 NLRP6P59044 892 aa17.11■□□□□ 0.33
CCS-202ENST00000525435 KIF7Q2M1P5 1343 aa17.11■□□□□ 0.33
CCS-202ENST00000525435 POLR3GLQ9BT43 218 aa17.1■□□□□ 0.33
CCS-202ENST00000525435 TRPM3Q9HCF6 1732 aaPredicted RBP17.1■□□□□ 0.33
CCS-202ENST00000525435 HAP1P54257 671 aaPredicted RBP17.09■□□□□ 0.33
CCS-202ENST00000525435 MEX3CQ5U5Q3 659 aaKnown RBP17.09■□□□□ 0.33
CCS-202ENST00000525435 COL22A1Q8NFW1 1626 aaPredicted RBP17.09■□□□□ 0.33
CCS-202ENST00000525435 USP31Q70CQ4 1352 aa17.08■□□□□ 0.32
CCS-202ENST00000525435 USP19O94966 1318 aa17.08■□□□□ 0.32
CCS-202ENST00000525435 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.08■□□□□ 0.32
CCS-202ENST00000525435 CABLES1Q8TDN4 633 aa17.08■□□□□ 0.32
CCS-202ENST00000525435 ADAMTS2O95450 1211 aa17.07■□□□□ 0.32
CCS-202ENST00000525435 CARD14Q9BXL6 1004 aa17.07■□□□□ 0.32
CCS-202ENST00000525435 PANK3Q9H999 370 aa17.07■□□□□ 0.32
CCS-202ENST00000525435 CCDC7Q96M83 1385 aa17.06■□□□□ 0.32
CCS-202ENST00000525435 WASHC2AQ641Q2 1341 aa17.06■□□□□ 0.32
CCS-202ENST00000525435 GCP02774 474 aa17.06■□□□□ 0.32
CCS-202ENST00000525435 NUTM2GQ5VZR2 741 aa17.06■□□□□ 0.32
CCS-202ENST00000525435 KCNH5Q8NCM2 988 aa17.06■□□□□ 0.32
CCS-202ENST00000525435 PHF23Q9BUL5 403 aaPredicted RBP17.06■□□□□ 0.32
CCS-202ENST00000525435 ALS2Q96Q42 1657 aa17.06■□□□□ 0.32
CCS-202ENST00000525435 SOCS7O14512 581 aa17.05■□□□□ 0.32
CCS-202ENST00000525435 FNBP4Q8N3X1 1017 aaPredicted RBP17.05■□□□□ 0.32
CCS-202ENST00000525435 NGLY1Q96IV0 654 aa17.05■□□□□ 0.32
CCS-202ENST00000525435 AKAP12Q02952 1782 aa17.05■□□□□ 0.32
CCS-202ENST00000525435 LRP6O75581 1613 aa17.04■□□□□ 0.32
CCS-202ENST00000525435 FYB1O15117 783 aa17.04■□□□□ 0.32
CCS-202ENST00000525435 NME9Q86XW9 330 aa17.04■□□□□ 0.32
CCS-202ENST00000525435 ZNF772Q68DY9 489 aaPredicted RBP17.03■□□□□ 0.32
CCS-202ENST00000525435 C8orf37Q96NL8 207 aa17.03■□□□□ 0.32
CCS-202ENST00000525435 CGNL1Q0VF96 1302 aa17.02■□□□□ 0.32
CCS-202ENST00000525435 FAM83GA6ND36 823 aa17.02■□□□□ 0.32
CCS-202ENST00000525435 COG3Q96JB2 828 aa17.02■□□□□ 0.32
CCS-202ENST00000525435 CPDO75976 1380 aa17.02■□□□□ 0.31
CCS-202ENST00000525435 MON2Q7Z3U7 1717 aa17.01■□□□□ 0.31
CCS-202ENST00000525435 KNSTRNQ9Y448 316 aa17.01■□□□□ 0.31
CCS-202ENST00000525435 PLEKHG5O94827 1062 aa17■□□□□ 0.31
CCS-202ENST00000525435 PRDM11Q9NQV5 511 aa17■□□□□ 0.31
CCS-202ENST00000525435 NSD3Q9BZ95 1437 aa16.99■□□□□ 0.31
CCS-202ENST00000525435 PER1O15534 1290 aaPredicted RBP16.99■□□□□ 0.31
CCS-202ENST00000525435 ZC3H6P61129 1189 aaKnown RBP16.99■□□□□ 0.31
CCS-202ENST00000525435 RGS17Q9UGC6 210 aaPredicted RBP16.99■□□□□ 0.31
CCS-202ENST00000525435 ZRANB1Q9UGI0 708 aa16.99■□□□□ 0.31
CCS-202ENST00000525435 AFF2P51816 1311 aa16.98■□□□□ 0.31
CCS-202ENST00000525435 NRKQ7Z2Y5 1582 aa16.98■□□□□ 0.31
CCS-202ENST00000525435 ARHGEF25Q86VW2 580 aa16.98■□□□□ 0.31
CCS-202ENST00000525435 USP21Q9UK80 565 aa16.98■□□□□ 0.31
CCS-202ENST00000525435 SLIT3O75094 1523 aa16.97■□□□□ 0.31
CCS-202ENST00000525435 UNC5CLQ8IV45 518 aa16.97■□□□□ 0.31
CCS-202ENST00000525435 GGNBP2Q9H3C7 697 aa16.97■□□□□ 0.31
CCS-202ENST00000525435 KIAA0232Q92628 1395 aa16.97■□□□□ 0.31
CCS-202ENST00000525435 MYOM1P52179 1685 aa16.97■□□□□ 0.31
CCS-202ENST00000525435 OVOS2A0A0J9YW53 1432 aa16.96■□□□□ 0.31
CCS-202ENST00000525435 OVOS2Q6IE36 1432 aa16.96■□□□□ 0.31
CCS-202ENST00000525435 NSD2O96028 1365 aa16.96■□□□□ 0.31
CCS-202ENST00000525435 PIK3C2AO00443 1686 aa16.96■□□□□ 0.31
CCS-202ENST00000525435 AATKQ6ZMQ8 1374 aa16.95■□□□□ 0.3
CCS-202ENST00000525435 TRPC5Q9UL62 973 aaPredicted RBP16.95■□□□□ 0.3
CCS-202ENST00000525435 SLIT2O94813 1529 aa16.95■□□□□ 0.3
CCS-202ENST00000525435 AMER1Q5JTC6 1135 aaPredicted RBP16.94■□□□□ 0.3
CCS-202ENST00000525435 QTRT2Q9H974 415 aaKnown RBP16.94■□□□□ 0.3
CCS-202ENST00000525435 BTG4Q9NY30 223 aa16.94■□□□□ 0.3
CCS-202ENST00000525435 BCL9LQ86UU0 1499 aa16.93■□□□□ 0.3
CCS-202ENST00000525435 NPC1L1Q9UHC9 1359 aa16.92■□□□□ 0.3
CCS-202ENST00000525435 CHRNA2Q15822 529 aa16.92■□□□□ 0.3
CCS-202ENST00000525435 USP54Q70EL1 1684 aa16.91■□□□□ 0.3
CCS-202ENST00000525435 CRYBG1Q9Y4K1 1723 aa16.91■□□□□ 0.3
CCS-202ENST00000525435 SOX12O15370 315 aa16.91■□□□□ 0.3
CCS-202ENST00000525435 VPS72Q15906 364 aa16.91■□□□□ 0.3
CCS-202ENST00000525435 POTEAQ6S8J7 498 aa16.91■□□□□ 0.3
CCS-202ENST00000525435 EVA1CP58658 441 aa16.9■□□□□ 0.3
CCS-202ENST00000525435 ABCA3Q99758 1704 aa16.9■□□□□ 0.3
CCS-202ENST00000525435 KIF24Q5T7B8 1368 aa16.89■□□□□ 0.3
CCS-202ENST00000525435 ZNF316A6NFI3 1004 aaPredicted RBP16.89■□□□□ 0.29
CCS-202ENST00000525435 RXRBP28702 533 aa16.89■□□□□ 0.29
CCS-202ENST00000525435 RBM6P78332 1123 aaKnown RBP16.89■□□□□ 0.29
CCS-202ENST00000525435 IP6K1Q92551 441 aa16.89■□□□□ 0.29
CCS-202ENST00000525435 NFAT5O94916 1531 aa16.89■□□□□ 0.29
CCS-202ENST00000525435 PHRF1Q9P1Y6 1649 aaKnown RBP16.88■□□□□ 0.29
CCS-202ENST00000525435 COL14A1Q05707 1796 aaKnown RBP16.88■□□□□ 0.29
CCS-202ENST00000525435 MORC1Q86VD1 984 aa16.88■□□□□ 0.29
CCS-202ENST00000525435 GJD4Q96KN9 370 aaPredicted RBP16.88■□□□□ 0.29
CCS-202ENST00000525435 ATRNO75882 1429 aa16.87■□□□□ 0.29
CCS-202ENST00000525435 MARF1Q9Y4F3 1742 aaKnown RBP16.87■□□□□ 0.29
CCS-202ENST00000525435 AXIN2Q9Y2T1 843 aa16.87■□□□□ 0.29
CCS-202ENST00000525435 MAP3K19Q56UN5 1328 aa16.87■□□□□ 0.29
CCS-202ENST00000525435 ABCC6O95255 1503 aa16.86■□□□□ 0.29
CCS-202ENST00000525435 ZBTB7CA1YPR0 619 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms