RNA–Protein interactions for RNA: ENST00000524835.5

TM9SF1-203, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2 BASIC

Gene TM9SF1, Length 1,938 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-203ENST00000524835 ZNF692Q9BU19 519 aaPredicted RBP25.55■■□□□ 1.68
TM9SF1-203ENST00000524835 PLEKHG3A1L390 1219 aa25.54■■□□□ 1.68
TM9SF1-203ENST00000524835 GOLGA2Q08379 1002 aa25.53■■□□□ 1.68
TM9SF1-203ENST00000524835 NME9Q86XW9 330 aa25.53■■□□□ 1.68
TM9SF1-203ENST00000524835 RUNDC1Q96C34 613 aa25.53■■□□□ 1.68
TM9SF1-203ENST00000524835 CHD2O14647 1828 aaKnown RBP25.52■■□□□ 1.68
TM9SF1-203ENST00000524835 DUSP27Q5VZP5 1158 aa25.51■■□□□ 1.67
TM9SF1-203ENST00000524835 ACEP12821 1306 aa25.49■■□□□ 1.67
TM9SF1-203ENST00000524835 NUTM2FA1L443 756 aa25.49■■□□□ 1.67
TM9SF1-203ENST00000524835 PPP4R2Q9NY27 417 aa25.49■■□□□ 1.67
TM9SF1-203ENST00000524835 SLFN5Q08AF3 891 aa25.49■■□□□ 1.67
TM9SF1-203ENST00000524835 PELP1Q8IZL8 1130 aaKnown RBP25.49■■□□□ 1.67
TM9SF1-203ENST00000524835 USP6P35125 1406 aa25.48■■□□□ 1.67
TM9SF1-203ENST00000524835 U2AF1L5P0DN76 240 aaPredicted RBP25.48■■□□□ 1.67
TM9SF1-203ENST00000524835 RRP1P56182 461 aaKnown RBP25.48■■□□□ 1.67
TM9SF1-203ENST00000524835 U2AF1Q01081 240 aaKnown RBP eCLIP25.48■■□□□ 1.67
TM9SF1-203ENST00000524835 TRMT2AQ8IZ69 625 aaKnown RBP25.48■■□□□ 1.67
TM9SF1-203ENST00000524835 POLKQ9UBT6 870 aa25.48■■□□□ 1.67
TM9SF1-203ENST00000524835 ZRANB1Q9UGI0 708 aa25.47■■□□□ 1.67
TM9SF1-203ENST00000524835 AATKQ6ZMQ8 1374 aa25.47■■□□□ 1.67
TM9SF1-203ENST00000524835 NPHP4O75161 1426 aaPredicted RBP25.46■■□□□ 1.67
TM9SF1-203ENST00000524835 TCP11L2Q8N4U5 519 aa25.46■■□□□ 1.67
TM9SF1-203ENST00000524835 MAP2P11137 1827 aaKnown RBP25.45■■□□□ 1.67
TM9SF1-203ENST00000524835 ANKARQ7Z5J8 1434 aa25.45■■□□□ 1.67
TM9SF1-203ENST00000524835 TTC21BQ7Z4L5 1316 aa25.45■■□□□ 1.66
TM9SF1-203ENST00000524835 FBLN1P23142 703 aa25.45■■□□□ 1.66
TM9SF1-203ENST00000524835 SSH2Q76I76 1423 aa25.45■■□□□ 1.66
TM9SF1-203ENST00000524835 PHF23Q9BUL5 403 aaPredicted RBP25.45■■□□□ 1.66
TM9SF1-203ENST00000524835 FMN2Q9NZ56 1722 aa25.45■■□□□ 1.66
TM9SF1-203ENST00000524835 WWC1Q8IX03 1113 aa25.44■■□□□ 1.66
TM9SF1-203ENST00000524835 COG3Q96JB2 828 aa25.44■■□□□ 1.66
TM9SF1-203ENST00000524835 SPINK5Q9NQ38 1064 aaPredicted RBP25.44■■□□□ 1.66
TM9SF1-203ENST00000524835 RGPD8O14715 1765 aaPredicted RBP25.44■■□□□ 1.66
TM9SF1-203ENST00000524835 DIAPH1O60610 1272 aaKnown RBP25.43■■□□□ 1.66
TM9SF1-203ENST00000524835 DMRT2Q9Y5R5 561 aa25.43■■□□□ 1.66
TM9SF1-203ENST00000524835 NALCNQ8IZF0 1738 aa25.43■■□□□ 1.66
TM9SF1-203ENST00000524835 CDK12Q9NYV4 1490 aaPredicted RBP25.43■■□□□ 1.66
TM9SF1-203ENST00000524835 NCBP3Q53F19 620 aaKnown RBP25.42■■□□□ 1.66
TM9SF1-203ENST00000524835 OVOS2A0A0J9YW53 1432 aa25.42■■□□□ 1.66
TM9SF1-203ENST00000524835 OVOS2Q6IE36 1432 aa25.42■■□□□ 1.66
TM9SF1-203ENST00000524835 E9PSI1 815 aa25.41■■□□□ 1.66
TM9SF1-203ENST00000524835 U2SURPO15042 1029 aaKnown RBP25.41■■□□□ 1.66
TM9SF1-203ENST00000524835 PLEKHF1Q96S99 279 aa25.41■■□□□ 1.66
TM9SF1-203ENST00000524835 RRP7AQ9Y3A4 280 aaKnown RBP25.4■■□□□ 1.66
TM9SF1-203ENST00000524835 CCDC27Q2M243 656 aa25.39■■□□□ 1.66
TM9SF1-203ENST00000524835 EMILIN1Q9Y6C2 1016 aa25.39■■□□□ 1.66
TM9SF1-203ENST00000524835 PMFBP1Q8TBY8 1022 aa25.37■■□□□ 1.65
TM9SF1-203ENST00000524835 PPM1GO15355 546 aaPredicted RBP25.37■■□□□ 1.65
TM9SF1-203ENST00000524835 NEUROD2Q15784 382 aa25.37■■□□□ 1.65
TM9SF1-203ENST00000524835 NWD1Q149M9 1564 aa25.35■■□□□ 1.65
TM9SF1-203ENST00000524835 TTC21AQ8NDW8 1320 aa25.35■■□□□ 1.65
TM9SF1-203ENST00000524835 LRRC7Q96NW7 1537 aa25.35■■□□□ 1.65
TM9SF1-203ENST00000524835 ADGRL3Q9HAR2 1447 aa25.34■■□□□ 1.65
TM9SF1-203ENST00000524835 USP31Q70CQ4 1352 aa25.33■■□□□ 1.65
TM9SF1-203ENST00000524835 RRS1Q15050 365 aaKnown RBP25.33■■□□□ 1.65
TM9SF1-203ENST00000524835 B4GALNT3Q6L9W6 998 aa25.33■■□□□ 1.65
TM9SF1-203ENST00000524835 WDR63Q8IWG1 891 aa25.33■■□□□ 1.65
TM9SF1-203ENST00000524835 NGDNQ8NEJ9 315 aaKnown RBP25.33■■□□□ 1.65
TM9SF1-203ENST00000524835 IL13P35225 146 aa25.31■■□□□ 1.64
TM9SF1-203ENST00000524835 MAPK8IP3Q9UPT6 1336 aa25.3■■□□□ 1.64
TM9SF1-203ENST00000524835 FCHSD2O94868 740 aa25.3■■□□□ 1.64
TM9SF1-203ENST00000524835 PIK3C2AO00443 1686 aa25.3■■□□□ 1.64
TM9SF1-203ENST00000524835 RSPH6AQ9H0K4 717 aa25.29■■□□□ 1.64
TM9SF1-203ENST00000524835 PNNQ9H307 717 aaKnown RBP25.29■■□□□ 1.64
TM9SF1-203ENST00000524835 TMPOP42166 694 aaKnown RBP25.29■■□□□ 1.64
TM9SF1-203ENST00000524835 RBM33Q96EV2 1170 aaKnown RBP25.29■■□□□ 1.64
TM9SF1-203ENST00000524835 PLIN1O60240 522 aa25.28■■□□□ 1.64
TM9SF1-203ENST00000524835 PEAK1Q9H792 1746 aa25.26■■□□□ 1.63
TM9SF1-203ENST00000524835 EXOC6Q8TAG9 804 aa25.25■■□□□ 1.63
TM9SF1-203ENST00000524835 TRIM35Q9UPQ4 493 aa25.25■■□□□ 1.63
TM9SF1-203ENST00000524835 USP54Q70EL1 1684 aa25.24■■□□□ 1.63
TM9SF1-203ENST00000524835 PRKAR2BP31323 418 aa25.24■■□□□ 1.63
TM9SF1-203ENST00000524835 MARF1Q9Y4F3 1742 aaKnown RBP25.22■■□□□ 1.63
TM9SF1-203ENST00000524835 PHF8Q9UPP1 1060 aa25.22■■□□□ 1.63
TM9SF1-203ENST00000524835 HMOX1P09601 288 aa25.21■■□□□ 1.63
TM9SF1-203ENST00000524835 CCDC136Q96JN2 1154 aa25.21■■□□□ 1.63
TM9SF1-203ENST00000524835 TSHZ2Q9NRE2 1034 aa25.2■■□□□ 1.62
TM9SF1-203ENST00000524835 RIPK4P57078 832 aa25.19■■□□□ 1.62
TM9SF1-203ENST00000524835 C20orf194Q5TEA3 1177 aa25.19■■□□□ 1.62
TM9SF1-203ENST00000524835 MYH16Q9H6N6 1097 aa25.19■■□□□ 1.62
TM9SF1-203ENST00000524835 EIF4A2Q14240 407 aaKnown RBP25.18■■□□□ 1.62
TM9SF1-203ENST00000524835 PHACTR3Q96KR7 559 aa25.18■■□□□ 1.62
TM9SF1-203ENST00000524835 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.17■■□□□ 1.62
TM9SF1-203ENST00000524835 CRBNQ96SW2 442 aa25.17■■□□□ 1.62
TM9SF1-203ENST00000524835 IL16Q14005 1332 aa25.17■■□□□ 1.62
TM9SF1-203ENST00000524835 MAP3K19Q56UN5 1328 aa25.17■■□□□ 1.62
TM9SF1-203ENST00000524835 RGPD1P0DJD0 1748 aa25.17■■□□□ 1.62
TM9SF1-203ENST00000524835 BCAR3O75815 825 aa25.16■■□□□ 1.62
TM9SF1-203ENST00000524835 C14orf37Q86TY3 774 aa25.16■■□□□ 1.62
TM9SF1-203ENST00000524835 SOX12O15370 315 aa25.15■■□□□ 1.62
TM9SF1-203ENST00000524835 NEFMP07197 916 aa25.15■■□□□ 1.62
TM9SF1-203ENST00000524835 SBNO1A3KN83 1393 aa25.14■■□□□ 1.62
TM9SF1-203ENST00000524835 NLRP6P59044 892 aa25.14■■□□□ 1.62
TM9SF1-203ENST00000524835 NFE2L2Q16236 605 aa25.14■■□□□ 1.62
TM9SF1-203ENST00000524835 HSP90AB2PQ58FF8 381 aa25.14■■□□□ 1.62
TM9SF1-203ENST00000524835 FANCIQ9NVI1 1328 aa25.14■■□□□ 1.61
TM9SF1-203ENST00000524835 FLT4P35916 1363 aa25.13■■□□□ 1.61
TM9SF1-203ENST00000524835 PROSER2Q86WR7 435 aaPredicted RBP25.13■■□□□ 1.61
TM9SF1-203ENST00000524835 ESCO1Q5FWF5 840 aa25.12■■□□□ 1.61
TM9SF1-203ENST00000524835 STRCP1A6NGW2 1772 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms