RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 IQSEC2Q5JU85 1478 aa16.56■□□□□ 0.24
CAPN1-202ENST00000524773 GGT6Q6P531 493 aa16.56■□□□□ 0.24
CAPN1-202ENST00000524773 TET3O43151 1660 aa16.55■□□□□ 0.24
CAPN1-202ENST00000524773 CLCN1P35523 988 aa16.55■□□□□ 0.24
CAPN1-202ENST00000524773 VSIG10Q8N0Z9 540 aa16.55■□□□□ 0.24
CAPN1-202ENST00000524773 VWDEQ8N2E2 1590 aa16.55■□□□□ 0.24
CAPN1-202ENST00000524773 TMPOP42166 694 aaKnown RBP16.54■□□□□ 0.24
CAPN1-202ENST00000524773 MRE11P49959 708 aa16.54■□□□□ 0.24
CAPN1-202ENST00000524773 GLI2P10070 1586 aa16.54■□□□□ 0.24
CAPN1-202ENST00000524773 ANKRD45Q5TZF3 282 aa16.54■□□□□ 0.24
CAPN1-202ENST00000524773 RIPK4P57078 832 aa16.53■□□□□ 0.24
CAPN1-202ENST00000524773 MROH1Q8NDA8 1641 aa16.53■□□□□ 0.24
CAPN1-202ENST00000524773 ESPNB1AK53 854 aa16.53■□□□□ 0.24
CAPN1-202ENST00000524773 DDX19BQ9UMR2 479 aa16.52■□□□□ 0.24
CAPN1-202ENST00000524773 SSFA2P28290 1259 aa16.52■□□□□ 0.23
CAPN1-202ENST00000524773 ZBTB40Q9NUA8 1239 aa16.51■□□□□ 0.23
CAPN1-202ENST00000524773 SMC5Q8IY18 1101 aa16.51■□□□□ 0.23
CAPN1-202ENST00000524773 HDAC1Q13547 482 aaPredicted RBP16.5■□□□□ 0.23
CAPN1-202ENST00000524773 HSP90AA2PQ14568 343 aaPredicted RBP16.5■□□□□ 0.23
CAPN1-202ENST00000524773 CHAMP1Q96JM3 812 aa16.5■□□□□ 0.23
CAPN1-202ENST00000524773 KIF2CQ99661 725 aa16.5■□□□□ 0.23
CAPN1-202ENST00000524773 SRPK2P78362 688 aaKnown RBP16.5■□□□□ 0.23
CAPN1-202ENST00000524773 CCDC27Q2M243 656 aa16.5■□□□□ 0.23
CAPN1-202ENST00000524773 TRIM44Q96DX7 344 aaPredicted RBP16.5■□□□□ 0.23
CAPN1-202ENST00000524773 DIP2BQ9P265 1576 aa16.49■□□□□ 0.23
CAPN1-202ENST00000524773 MYOM2P54296 1465 aa16.49■□□□□ 0.23
CAPN1-202ENST00000524773 DDX11L8A8MPP1 907 aa16.49■□□□□ 0.23
CAPN1-202ENST00000524773 CHD1LQ86WJ1 897 aa16.49■□□□□ 0.23
CAPN1-202ENST00000524773 PLEKHF1Q96S99 279 aa16.49■□□□□ 0.23
CAPN1-202ENST00000524773 FRMPD1Q5SYB0 1578 aa16.49■□□□□ 0.23
CAPN1-202ENST00000524773 ATAD2Q6PL18 1390 aa16.49■□□□□ 0.23
CAPN1-202ENST00000524773 NUCB1Q02818 461 aa16.48■□□□□ 0.23
CAPN1-202ENST00000524773 GAS2L2Q8NHY3 880 aa16.48■□□□□ 0.23
CAPN1-202ENST00000524773 RICTORQ6R327 1708 aa16.48■□□□□ 0.23
CAPN1-202ENST00000524773 NCLP19338 710 aaKnown RBP16.47■□□□□ 0.23
CAPN1-202ENST00000524773 DDIT3P35638 169 aa16.47■□□□□ 0.23
CAPN1-202ENST00000524773 TSPOAP1O95153 1857 aa16.47■□□□□ 0.23
CAPN1-202ENST00000524773 APBB1O00213 710 aa16.47■□□□□ 0.23
CAPN1-202ENST00000524773 HMOX1P09601 288 aa16.47■□□□□ 0.23
CAPN1-202ENST00000524773 AAMPQ13685 434 aa16.47■□□□□ 0.23
CAPN1-202ENST00000524773 TSPYL6Q8N831 410 aa16.47■□□□□ 0.23
CAPN1-202ENST00000524773 C14orf93Q9H972 538 aaKnown RBP16.47■□□□□ 0.23
CAPN1-202ENST00000524773 TBC1D9Q6ZT07 1266 aa16.46■□□□□ 0.23
CAPN1-202ENST00000524773 EFCAB6Q5THR3 1501 aa16.46■□□□□ 0.23
CAPN1-202ENST00000524773 MINK1Q8N4C8 1332 aaPredicted RBP16.46■□□□□ 0.23
CAPN1-202ENST00000524773 MROH2AA6NES4 1674 aa16.45■□□□□ 0.22
CAPN1-202ENST00000524773 SBNO2Q9Y2G9 1366 aa16.45■□□□□ 0.22
CAPN1-202ENST00000524773 ZBTB7CA1YPR0 619 aa16.45■□□□□ 0.22
CAPN1-202ENST00000524773 PKP1Q13835 747 aa16.45■□□□□ 0.22
CAPN1-202ENST00000524773 RBM25P49756 843 aaKnown RBP16.44■□□□□ 0.22
CAPN1-202ENST00000524773 LMTK2Q8IWU2 1503 aa16.44■□□□□ 0.22
CAPN1-202ENST00000524773 DIP2CQ9Y2E4 1556 aa16.44■□□□□ 0.22
CAPN1-202ENST00000524773 RAB3GAP1Q15042 981 aa16.44■□□□□ 0.22
CAPN1-202ENST00000524773 FOXD4L5Q5VV16 416 aaPredicted RBP16.44■□□□□ 0.22
CAPN1-202ENST00000524773 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.44■□□□□ 0.22
CAPN1-202ENST00000524773 FOXD4L4Q8WXT5 416 aaPredicted RBP16.44■□□□□ 0.22
CAPN1-202ENST00000524773 ARID3AQ99856 593 aa16.44■□□□□ 0.22
CAPN1-202ENST00000524773 PPRC1Q5VV67 1664 aaKnown RBP16.44■□□□□ 0.22
CAPN1-202ENST00000524773 ZMYND15Q9H091 742 aa16.44■□□□□ 0.22
CAPN1-202ENST00000524773 YEATS2Q9ULM3 1422 aa16.44■□□□□ 0.22
CAPN1-202ENST00000524773 C16orf71Q8IYS4 520 aaPredicted RBP16.43■□□□□ 0.22
CAPN1-202ENST00000524773 SIRT2Q8IXJ6 389 aa16.42■□□□□ 0.22
CAPN1-202ENST00000524773 GBP4Q96PP9 640 aa16.42■□□□□ 0.22
CAPN1-202ENST00000524773 PHACTR3Q96KR7 559 aa16.42■□□□□ 0.22
CAPN1-202ENST00000524773 DDX49Q9Y6V7 483 aaKnown RBP16.42■□□□□ 0.22
CAPN1-202ENST00000524773 AK9Q5TCS8 1911 aa16.42■□□□□ 0.22
CAPN1-202ENST00000524773 EVC2Q86UK5 1308 aa16.42■□□□□ 0.22
CAPN1-202ENST00000524773 A0A1W2PP64 1363 aa16.42■□□□□ 0.22
CAPN1-202ENST00000524773 FYB1O15117 783 aa16.41■□□□□ 0.22
CAPN1-202ENST00000524773 PRKAR2BP31323 418 aa16.41■□□□□ 0.22
CAPN1-202ENST00000524773 RBM10P98175 930 aaKnown RBP16.41■□□□□ 0.22
CAPN1-202ENST00000524773 MCTP1Q6DN14 999 aa16.41■□□□□ 0.22
CAPN1-202ENST00000524773 MYO3AQ8NEV4 1616 aa16.4■□□□□ 0.22
CAPN1-202ENST00000524773 K7ELQ4 463 aaPredicted RBP16.4■□□□□ 0.22
CAPN1-202ENST00000524773 PKNOX2Q96KN3 472 aa16.4■□□□□ 0.22
CAPN1-202ENST00000524773 NPATQ14207 1427 aa16.4■□□□□ 0.22
CAPN1-202ENST00000524773 OTUD7AQ8TE49 926 aaPredicted RBP16.4■□□□□ 0.22
CAPN1-202ENST00000524773 SNX21Q969T3 373 aa16.4■□□□□ 0.22
CAPN1-202ENST00000524773 PPIP5K1Q6PFW1 1433 aa16.4■□□□□ 0.22
CAPN1-202ENST00000524773 NRXN1Q9ULB1 1477 aa16.4■□□□□ 0.22
CAPN1-202ENST00000524773 KIF1BO60333 1816 aa16.4■□□□□ 0.22
CAPN1-202ENST00000524773 NASPP49321 788 aaPredicted RBP16.39■□□□□ 0.21
CAPN1-202ENST00000524773 NCOA3Q9Y6Q9 1424 aa16.39■□□□□ 0.21
CAPN1-202ENST00000524773 ZMYM3Q14202 1370 aa16.39■□□□□ 0.21
CAPN1-202ENST00000524773 ZBTB7BO15156 539 aaPredicted RBP16.39■□□□□ 0.21
CAPN1-202ENST00000524773 QRICH2Q9H0J4 1663 aa16.39■□□□□ 0.21
CAPN1-202ENST00000524773 IPO8O15397 1037 aaKnown RBP16.38■□□□□ 0.21
CAPN1-202ENST00000524773 DIAPH1O60610 1272 aaKnown RBP16.38■□□□□ 0.21
CAPN1-202ENST00000524773 NCBP3Q53F19 620 aaKnown RBP16.38■□□□□ 0.21
CAPN1-202ENST00000524773 CAVIN1Q6NZI2 390 aaKnown RBP16.38■□□□□ 0.21
CAPN1-202ENST00000524773 RBM27Q9P2N5 1060 aaKnown RBP16.38■□□□□ 0.21
CAPN1-202ENST00000524773 ABCC3O15438 1527 aa16.38■□□□□ 0.21
CAPN1-202ENST00000524773 ANKRD36BQ8N2N9 1353 aa16.38■□□□□ 0.21
CAPN1-202ENST00000524773 GSPT1P15170 499 aaKnown RBP16.38■□□□□ 0.21
CAPN1-202ENST00000524773 DCTN1Q14203 1278 aa16.38■□□□□ 0.21
CAPN1-202ENST00000524773 BMP2KLQ5H9B9 411 aa16.38■□□□□ 0.21
CAPN1-202ENST00000524773 KIAA1211Q6ZU35 1233 aa16.38■□□□□ 0.21
CAPN1-202ENST00000524773 SETBP1Q9Y6X0 1596 aa16.38■□□□□ 0.21
CAPN1-202ENST00000524773 FAM83GA6ND36 823 aa16.37■□□□□ 0.21
CAPN1-202ENST00000524773 BAG4O95429 457 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms