RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 ILDR1Q86SU0 546 aaPredicted RBP17.91■□□□□ 0.46
LDLRAD3-202ENST00000524419 TXNDC2Q86VQ3 553 aa17.91■□□□□ 0.46
LDLRAD3-202ENST00000524419 AKAP12Q02952 1782 aa17.91■□□□□ 0.46
LDLRAD3-202ENST00000524419 EDC4Q6P2E9 1401 aaKnown RBP17.91■□□□□ 0.46
LDLRAD3-202ENST00000524419 PLEKHG1Q9ULL1 1385 aa17.9■□□□□ 0.46
LDLRAD3-202ENST00000524419 ADAMTS13Q76LX8 1427 aa17.9■□□□□ 0.46
LDLRAD3-202ENST00000524419 CPSF1Q10570 1443 aaKnown RBP17.89■□□□□ 0.46
LDLRAD3-202ENST00000524419 U2SURPO15042 1029 aaKnown RBP17.89■□□□□ 0.45
LDLRAD3-202ENST00000524419 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.88■□□□□ 0.45
LDLRAD3-202ENST00000524419 MAP2P11137 1827 aaKnown RBP17.88■□□□□ 0.45
LDLRAD3-202ENST00000524419 ANP32AP39687 249 aaKnown RBP17.88■□□□□ 0.45
LDLRAD3-202ENST00000524419 NOP58Q9Y2X3 529 aaKnown RBP17.88■□□□□ 0.45
LDLRAD3-202ENST00000524419 MS4A1P11836 297 aa17.87■□□□□ 0.45
LDLRAD3-202ENST00000524419 PNPLA6Q8IY17 1366 aa17.87■□□□□ 0.45
LDLRAD3-202ENST00000524419 DIAPH1O60610 1272 aaKnown RBP17.86■□□□□ 0.45
LDLRAD3-202ENST00000524419 BCAR3O75815 825 aa17.86■□□□□ 0.45
LDLRAD3-202ENST00000524419 NUDT16Q96DE0 195 aaKnown RBP17.86■□□□□ 0.45
LDLRAD3-202ENST00000524419 MAPK8IP3Q9UPT6 1336 aa17.86■□□□□ 0.45
LDLRAD3-202ENST00000524419 ADAMTSL3P82987 1691 aa17.86■□□□□ 0.45
LDLRAD3-202ENST00000524419 SLIT1O75093 1534 aa17.85■□□□□ 0.45
LDLRAD3-202ENST00000524419 ROBO2Q9HCK4 1378 aa17.85■□□□□ 0.45
LDLRAD3-202ENST00000524419 MYH16Q9H6N6 1097 aa17.85■□□□□ 0.45
LDLRAD3-202ENST00000524419 TOPAZ1Q8N9V7 1692 aa17.85■□□□□ 0.45
LDLRAD3-202ENST00000524419 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.85■□□□□ 0.45
LDLRAD3-202ENST00000524419 PLEKHF1Q96S99 279 aa17.84■□□□□ 0.45
LDLRAD3-202ENST00000524419 PNNQ9H307 717 aaKnown RBP17.84■□□□□ 0.45
LDLRAD3-202ENST00000524419 CEBPAP49715 358 aaPredicted RBP17.84■□□□□ 0.45
LDLRAD3-202ENST00000524419 IPO9Q96P70 1041 aaKnown RBP17.84■□□□□ 0.45
LDLRAD3-202ENST00000524419 EID1Q9Y6B2 187 aa17.84■□□□□ 0.45
LDLRAD3-202ENST00000524419 CCDC61Q9Y6R9 512 aa17.84■□□□□ 0.45
LDLRAD3-202ENST00000524419 ARHGAP23Q9P227 1491 aa17.83■□□□□ 0.45
LDLRAD3-202ENST00000524419 CANXP27824 592 aaKnown RBP17.83■□□□□ 0.44
LDLRAD3-202ENST00000524419 LTKP29376 864 aa17.83■□□□□ 0.44
LDLRAD3-202ENST00000524419 KDM2BQ8NHM5 1336 aa17.82■□□□□ 0.44
LDLRAD3-202ENST00000524419 LRRC7Q96NW7 1537 aa17.82■□□□□ 0.44
LDLRAD3-202ENST00000524419 PDE3AQ14432 1141 aa17.82■□□□□ 0.44
LDLRAD3-202ENST00000524419 CENPQQ7L2Z9 268 aaPredicted RBP17.82■□□□□ 0.44
LDLRAD3-202ENST00000524419 TMPOP42166 694 aaKnown RBP17.81■□□□□ 0.44
LDLRAD3-202ENST00000524419 DIP2AQ14689 1571 aa17.81■□□□□ 0.44
LDLRAD3-202ENST00000524419 CDK12Q9NYV4 1490 aaPredicted RBP17.81■□□□□ 0.44
LDLRAD3-202ENST00000524419 NRKQ7Z2Y5 1582 aa17.8■□□□□ 0.44
LDLRAD3-202ENST00000524419 NME9Q86XW9 330 aa17.8■□□□□ 0.44
LDLRAD3-202ENST00000524419 POLKQ9UBT6 870 aa17.8■□□□□ 0.44
LDLRAD3-202ENST00000524419 RARSP54136 660 aaKnown RBP17.79■□□□□ 0.44
LDLRAD3-202ENST00000524419 AATKQ6ZMQ8 1374 aa17.79■□□□□ 0.44
LDLRAD3-202ENST00000524419 PRR36Q9H6K5 1346 aa17.79■□□□□ 0.44
LDLRAD3-202ENST00000524419 PPM1GO15355 546 aaPredicted RBP17.78■□□□□ 0.44
LDLRAD3-202ENST00000524419 PDE4AP27815 886 aa17.78■□□□□ 0.44
LDLRAD3-202ENST00000524419 PTPRUQ92729 1446 aa17.78■□□□□ 0.44
LDLRAD3-202ENST00000524419 COG3Q96JB2 828 aa17.78■□□□□ 0.44
LDLRAD3-202ENST00000524419 ZNF692Q9BU19 519 aaPredicted RBP17.78■□□□□ 0.44
LDLRAD3-202ENST00000524419 NCKAP5LQ9HCH0 1330 aa17.77■□□□□ 0.44
LDLRAD3-202ENST00000524419 FCHSD2O94868 740 aa17.77■□□□□ 0.44
LDLRAD3-202ENST00000524419 BACH2Q9BYV9 841 aa17.77■□□□□ 0.44
LDLRAD3-202ENST00000524419 IL16Q14005 1332 aa17.77■□□□□ 0.43
LDLRAD3-202ENST00000524419 CT47B1P0C2W7 299 aaPredicted RBP17.77■□□□□ 0.43
LDLRAD3-202ENST00000524419 PLPPR3Q6T4P5 718 aa17.77■□□□□ 0.43
LDLRAD3-202ENST00000524419 PTCH1Q13635 1447 aa17.76■□□□□ 0.43
LDLRAD3-202ENST00000524419 NEFMP07197 916 aa17.76■□□□□ 0.43
LDLRAD3-202ENST00000524419 TRIM35Q9UPQ4 493 aa17.76■□□□□ 0.43
LDLRAD3-202ENST00000524419 PAK3O75914 559 aaPredicted RBP17.75■□□□□ 0.43
LDLRAD3-202ENST00000524419 FRAT1Q92837 279 aaPredicted RBP17.75■□□□□ 0.43
LDLRAD3-202ENST00000524419 SLC26A8Q96RN1 970 aa17.75■□□□□ 0.43
LDLRAD3-202ENST00000524419 ZBTB47Q9UFB7 747 aaPredicted RBP17.75■□□□□ 0.43
LDLRAD3-202ENST00000524419 RIPK4P57078 832 aa17.75■□□□□ 0.43
LDLRAD3-202ENST00000524419 THEMISQ8N1K5 641 aaPredicted RBP17.75■□□□□ 0.43
LDLRAD3-202ENST00000524419 RSPH6AQ9H0K4 717 aa17.75■□□□□ 0.43
LDLRAD3-202ENST00000524419 ZRANB1Q9UGI0 708 aa17.74■□□□□ 0.43
LDLRAD3-202ENST00000524419 TBX22Q9Y458 520 aa17.74■□□□□ 0.43
LDLRAD3-202ENST00000524419 EMILIN1Q9Y6C2 1016 aa17.74■□□□□ 0.43
LDLRAD3-202ENST00000524419 FBLN1P23142 703 aa17.73■□□□□ 0.43
LDLRAD3-202ENST00000524419 XRN1Q8IZH2 1706 aaKnown RBP17.73■□□□□ 0.43
LDLRAD3-202ENST00000524419 RIMS1Q86UR5 1692 aaKnown RBP17.73■□□□□ 0.43
LDLRAD3-202ENST00000524419 PRKAR2BP31323 418 aa17.73■□□□□ 0.43
LDLRAD3-202ENST00000524419 PANK1Q8TE04 598 aa17.73■□□□□ 0.43
LDLRAD3-202ENST00000524419 TSR2Q969E8 191 aaKnown RBP17.73■□□□□ 0.43
LDLRAD3-202ENST00000524419 NALCNQ8IZF0 1738 aa17.72■□□□□ 0.43
LDLRAD3-202ENST00000524419 CEP170BQ9Y4F5 1589 aaPredicted RBP17.72■□□□□ 0.43
LDLRAD3-202ENST00000524419 PLEKHG3A1L390 1219 aa17.71■□□□□ 0.43
LDLRAD3-202ENST00000524419 AMOTL2Q9Y2J4 779 aa17.71■□□□□ 0.43
LDLRAD3-202ENST00000524419 COG6Q9Y2V7 657 aa17.71■□□□□ 0.43
LDLRAD3-202ENST00000524419 IL13P35225 146 aa17.71■□□□□ 0.43
LDLRAD3-202ENST00000524419 AAMPQ13685 434 aa17.71■□□□□ 0.43
LDLRAD3-202ENST00000524419 USP6P35125 1406 aa17.7■□□□□ 0.42
LDLRAD3-202ENST00000524419 CLUAP1Q96AJ1 413 aa17.7■□□□□ 0.42
LDLRAD3-202ENST00000524419 BCL2L13Q9BXK5 485 aa17.7■□□□□ 0.42
LDLRAD3-202ENST00000524419 ACEP12821 1306 aa17.7■□□□□ 0.42
LDLRAD3-202ENST00000524419 TTC21BQ7Z4L5 1316 aa17.7■□□□□ 0.42
LDLRAD3-202ENST00000524419 EXOSC9Q06265 439 aaKnown RBP17.7■□□□□ 0.42
LDLRAD3-202ENST00000524419 SKAP1Q86WV1 359 aa17.69■□□□□ 0.42
LDLRAD3-202ENST00000524419 OVOS2A0A0J9YW53 1432 aa17.69■□□□□ 0.42
LDLRAD3-202ENST00000524419 OVOS2Q6IE36 1432 aa17.69■□□□□ 0.42
LDLRAD3-202ENST00000524419 NFE2L2Q16236 605 aa17.68■□□□□ 0.42
LDLRAD3-202ENST00000524419 DLG5Q8TDM6 1919 aa17.68■□□□□ 0.42
LDLRAD3-202ENST00000524419 HMOX1P09601 288 aa17.68■□□□□ 0.42
LDLRAD3-202ENST00000524419 RRS1Q15050 365 aaKnown RBP17.68■□□□□ 0.42
LDLRAD3-202ENST00000524419 FBXO41Q8TF61 875 aa17.68■□□□□ 0.42
LDLRAD3-202ENST00000524419 RGPD8O14715 1765 aaPredicted RBP17.67■□□□□ 0.42
LDLRAD3-202ENST00000524419 ZKSCAN2Q63HK3 967 aa17.67■□□□□ 0.42
LDLRAD3-202ENST00000524419 NUTM2FA1L443 756 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms