RNA–Protein interactions for RNA: ENST00000524379.1

LMO1-203, Transcript of LIM domain only 1, humanhuman

TSL 1 (best)

Gene LMO1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-203ENST00000524379 KRT28Q7Z3Y7 464 aa25.92■■□□□ 1.74
LMO1-203ENST00000524379 MEX3CQ5U5Q3 659 aaKnown RBP25.91■■□□□ 1.74
LMO1-203ENST00000524379 ANKRD36BQ8N2N9 1353 aa25.91■■□□□ 1.74
LMO1-203ENST00000524379 PSME1Q06323 249 aa25.89■■□□□ 1.74
LMO1-203ENST00000524379 KTN1Q86UP2 1357 aaKnown RBP25.88■■□□□ 1.73
LMO1-203ENST00000524379 CARD14Q9BXL6 1004 aa25.88■■□□□ 1.73
LMO1-203ENST00000524379 SBNO1A3KN83 1393 aa25.87■■□□□ 1.73
LMO1-203ENST00000524379 TERF2IPQ9NYB0 399 aa25.86■■□□□ 1.73
LMO1-203ENST00000524379 ALS2Q96Q42 1657 aa25.86■■□□□ 1.73
LMO1-203ENST00000524379 ZNF692Q9BU19 519 aaPredicted RBP25.85■■□□□ 1.73
LMO1-203ENST00000524379 TNS3Q68CZ2 1445 aa25.85■■□□□ 1.73
LMO1-203ENST00000524379 SPATA31A3Q5VYP0 1347 aa25.85■■□□□ 1.73
LMO1-203ENST00000524379 HDGFL2Q7Z4V5 671 aaPredicted RBP25.84■■□□□ 1.73
LMO1-203ENST00000524379 PANK3Q9H999 370 aa25.84■■□□□ 1.73
LMO1-203ENST00000524379 LRP6O75581 1613 aa25.84■■□□□ 1.73
LMO1-203ENST00000524379 TTC21BQ7Z4L5 1316 aa25.84■■□□□ 1.73
LMO1-203ENST00000524379 ZNF316A6NFI3 1004 aaPredicted RBP25.83■■□□□ 1.73
LMO1-203ENST00000524379 NUTM2BA6NNL0 878 aaPredicted RBP25.83■■□□□ 1.73
LMO1-203ENST00000524379 NUTM2EB1AL46 878 aaPredicted RBP25.83■■□□□ 1.73
LMO1-203ENST00000524379 ZNF772Q68DY9 489 aaPredicted RBP25.83■■□□□ 1.73
LMO1-203ENST00000524379 NUTM2AQ8IVF1 878 aaPredicted RBP25.83■■□□□ 1.73
LMO1-203ENST00000524379 LRRC59Q96AG4 307 aaKnown RBP25.83■■□□□ 1.73
LMO1-203ENST00000524379 EDC4Q6P2E9 1401 aaKnown RBP25.82■■□□□ 1.72
LMO1-203ENST00000524379 PIK3C2AO00443 1686 aa25.81■■□□□ 1.72
LMO1-203ENST00000524379 SHPRHQ149N8 1683 aa25.81■■□□□ 1.72
LMO1-203ENST00000524379 BRD4O60885 1362 aaPredicted RBP25.81■■□□□ 1.72
LMO1-203ENST00000524379 PNPLA6Q8IY17 1366 aa25.81■■□□□ 1.72
LMO1-203ENST00000524379 NSD3Q9BZ95 1437 aa25.8■■□□□ 1.72
LMO1-203ENST00000524379 MARF1Q9Y4F3 1742 aaKnown RBP25.78■■□□□ 1.72
LMO1-203ENST00000524379 PAK3O75914 559 aaPredicted RBP25.78■■□□□ 1.72
LMO1-203ENST00000524379 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.77■■□□□ 1.72
LMO1-203ENST00000524379 ZRANB1Q9UGI0 708 aa25.77■■□□□ 1.72
LMO1-203ENST00000524379 COL22A1Q8NFW1 1626 aaPredicted RBP25.77■■□□□ 1.72
LMO1-203ENST00000524379 NME9Q86XW9 330 aa25.76■■□□□ 1.71
LMO1-203ENST00000524379 TTC21AQ8NDW8 1320 aa25.75■■□□□ 1.71
LMO1-203ENST00000524379 PER1O15534 1290 aaPredicted RBP25.75■■□□□ 1.71
LMO1-203ENST00000524379 NUTM2GQ5VZR2 741 aa25.75■■□□□ 1.71
LMO1-203ENST00000524379 CRYBG1Q9Y4K1 1723 aa25.74■■□□□ 1.71
LMO1-203ENST00000524379 ARHGEF10O15013 1369 aa25.73■■□□□ 1.71
LMO1-203ENST00000524379 USP54Q70EL1 1684 aa25.72■■□□□ 1.71
LMO1-203ENST00000524379 LMOD2Q6P5Q4 547 aa25.72■■□□□ 1.71
LMO1-203ENST00000524379 ABCA3Q99758 1704 aa25.71■■□□□ 1.71
LMO1-203ENST00000524379 USP31Q70CQ4 1352 aa25.71■■□□□ 1.71
LMO1-203ENST00000524379 RXRBP28702 533 aa25.71■■□□□ 1.71
LMO1-203ENST00000524379 DDX10Q13206 875 aaKnown RBP25.71■■□□□ 1.71
LMO1-203ENST00000524379 ABTB2Q8N961 1025 aa25.71■■□□□ 1.71
LMO1-203ENST00000524379 FYB1O15117 783 aa25.7■■□□□ 1.7
LMO1-203ENST00000524379 CABLES1Q8TDN4 633 aa25.7■■□□□ 1.7
LMO1-203ENST00000524379 OVOS2A0A0J9YW53 1432 aa25.7■■□□□ 1.7
LMO1-203ENST00000524379 OVOS2Q6IE36 1432 aa25.7■■□□□ 1.7
LMO1-203ENST00000524379 USP19O94966 1318 aa25.69■■□□□ 1.7
LMO1-203ENST00000524379 AFF2P51816 1311 aa25.69■■□□□ 1.7
LMO1-203ENST00000524379 KIF20BQ96Q89 1820 aa25.69■■□□□ 1.7
LMO1-203ENST00000524379 AMER1Q5JTC6 1135 aaPredicted RBP25.68■■□□□ 1.7
LMO1-203ENST00000524379 SLIT3O75094 1523 aa25.68■■□□□ 1.7
LMO1-203ENST00000524379 PHRF1Q9P1Y6 1649 aaKnown RBP25.67■■□□□ 1.7
LMO1-203ENST00000524379 PLEKHG5O94827 1062 aa25.67■■□□□ 1.7
LMO1-203ENST00000524379 NLRP6P59044 892 aa25.66■■□□□ 1.7
LMO1-203ENST00000524379 C8orf37Q96NL8 207 aa25.66■■□□□ 1.7
LMO1-203ENST00000524379 GGNBP2Q9H3C7 697 aa25.66■■□□□ 1.7
LMO1-203ENST00000524379 CGNL1Q0VF96 1302 aa25.63■■□□□ 1.69
LMO1-203ENST00000524379 NLRP13Q86W25 1043 aa25.62■■□□□ 1.69
LMO1-203ENST00000524379 KNSTRNQ9Y448 316 aa25.62■■□□□ 1.69
LMO1-203ENST00000524379 NFAT5O94916 1531 aa25.62■■□□□ 1.69
LMO1-203ENST00000524379 ADAMTS2O95450 1211 aa25.61■■□□□ 1.69
LMO1-203ENST00000524379 NGLY1Q96IV0 654 aa25.61■■□□□ 1.69
LMO1-203ENST00000524379 QTRT2Q9H974 415 aaKnown RBP25.61■■□□□ 1.69
LMO1-203ENST00000524379 ANKRD26Q9UPS8 1709 aa25.6■■□□□ 1.69
LMO1-203ENST00000524379 NPC1L1Q9UHC9 1359 aa25.58■■□□□ 1.69
LMO1-203ENST00000524379 NSD2O96028 1365 aa25.57■■□□□ 1.68
LMO1-203ENST00000524379 GCP02774 474 aa25.57■■□□□ 1.68
LMO1-203ENST00000524379 FBLN1P23142 703 aa25.57■■□□□ 1.68
LMO1-203ENST00000524379 UPF1Q92900 1129 aaKnown RBP eCLIP25.57■■□□□ 1.68
LMO1-203ENST00000524379 COG3Q96JB2 828 aa25.57■■□□□ 1.68
LMO1-203ENST00000524379 RBM6P78332 1123 aaKnown RBP25.56■■□□□ 1.68
LMO1-203ENST00000524379 SOX12O15370 315 aa25.55■■□□□ 1.68
LMO1-203ENST00000524379 CC2D1BQ5T0F9 858 aaKnown RBP25.55■■□□□ 1.68
LMO1-203ENST00000524379 CDK12Q9NYV4 1490 aaPredicted RBP25.54■■□□□ 1.68
LMO1-203ENST00000524379 KIAA0232Q92628 1395 aa25.52■■□□□ 1.68
LMO1-203ENST00000524379 ZC3H6P61129 1189 aaKnown RBP25.51■■□□□ 1.67
LMO1-203ENST00000524379 CNGB1Q14028 1251 aaPredicted RBP25.51■■□□□ 1.67
LMO1-203ENST00000524379 CPDO75976 1380 aa25.51■■□□□ 1.67
LMO1-203ENST00000524379 USP21Q9UK80 565 aa25.5■■□□□ 1.67
LMO1-203ENST00000524379 ARHGEF25Q86VW2 580 aa25.49■■□□□ 1.67
LMO1-203ENST00000524379 KCNH5Q8NCM2 988 aa25.49■■□□□ 1.67
LMO1-203ENST00000524379 FAM83GA6ND36 823 aa25.48■■□□□ 1.67
LMO1-203ENST00000524379 HAP1P54257 671 aaPredicted RBP25.48■■□□□ 1.67
LMO1-203ENST00000524379 MORC1Q86VD1 984 aa25.48■■□□□ 1.67
LMO1-203ENST00000524379 FNBP4Q8N3X1 1017 aaPredicted RBP25.48■■□□□ 1.67
LMO1-203ENST00000524379 COL18A1P39060 1754 aa25.48■■□□□ 1.67
LMO1-203ENST00000524379 PEAK1Q9H792 1746 aa25.46■■□□□ 1.67
LMO1-203ENST00000524379 AATKQ6ZMQ8 1374 aa25.46■■□□□ 1.67
LMO1-203ENST00000524379 LMO7Q8WWI1 1683 aa25.46■■□□□ 1.67
LMO1-203ENST00000524379 TNNT2P45379 298 aaPredicted RBP25.46■■□□□ 1.67
LMO1-203ENST00000524379 RRS1Q15050 365 aaKnown RBP25.46■■□□□ 1.67
LMO1-203ENST00000524379 CHRNA2Q15822 529 aa25.46■■□□□ 1.67
LMO1-203ENST00000524379 TRPC5Q9UL62 973 aaPredicted RBP25.46■■□□□ 1.67
LMO1-203ENST00000524379 LTN1O94822 1766 aa25.46■■□□□ 1.67
LMO1-203ENST00000524379 PARD3Q8TEW0 1356 aa25.45■■□□□ 1.67
LMO1-203ENST00000524379 MAP3K19Q56UN5 1328 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms