RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 CD2BP2O95400 341 aaKnown RBP12.68□□□□□ -0.38
SPIDR-224ENST00000524126 CAVIN1Q6NZI2 390 aaKnown RBP12.68□□□□□ -0.38
SPIDR-224ENST00000524126 CGNQ9P2M7 1197 aaKnown RBP12.68□□□□□ -0.38
SPIDR-224ENST00000524126 YEATS2Q9ULM3 1422 aa12.68□□□□□ -0.38
SPIDR-224ENST00000524126 PPP2R1AP30153 589 aa12.67□□□□□ -0.38
SPIDR-224ENST00000524126 KLHL40Q2TBA0 621 aa12.67□□□□□ -0.38
SPIDR-224ENST00000524126 MAGI2Q86UL8 1455 aa12.67□□□□□ -0.38
SPIDR-224ENST00000524126 CIZ1Q9ULV3 898 aaPredicted RBP12.67□□□□□ -0.38
SPIDR-224ENST00000524126 FRMPD1Q5SYB0 1578 aa12.66□□□□□ -0.38
SPIDR-224ENST00000524126 ABCA6Q8N139 1617 aa12.66□□□□□ -0.38
SPIDR-224ENST00000524126 ZSCAN23Q3MJ62 389 aa12.66□□□□□ -0.38
SPIDR-224ENST00000524126 MYRIPQ8NFW9 859 aa12.66□□□□□ -0.38
SPIDR-224ENST00000524126 UGGT1Q9NYU2 1555 aa12.66□□□□□ -0.38
SPIDR-224ENST00000524126 MROH1Q8NDA8 1641 aa12.66□□□□□ -0.38
SPIDR-224ENST00000524126 CCDC144AA2RUR9 1427 aa12.66□□□□□ -0.38
SPIDR-224ENST00000524126 PRIM1P49642 420 aaKnown RBP12.66□□□□□ -0.38
SPIDR-224ENST00000524126 NBPF1Q3BBV0 1214 aa12.66□□□□□ -0.38
SPIDR-224ENST00000524126 BCL2L13Q9BXK5 485 aa12.66□□□□□ -0.38
SPIDR-224ENST00000524126 DNTTIP2Q5QJE6 756 aaKnown RBP12.65□□□□□ -0.38
SPIDR-224ENST00000524126 PTMSP20962 102 aa12.65□□□□□ -0.38
SPIDR-224ENST00000524126 ZNF445P59923 1031 aa12.65□□□□□ -0.38
SPIDR-224ENST00000524126 MPNDQ8N594 471 aa12.65□□□□□ -0.38
SPIDR-224ENST00000524126 RBM27Q9P2N5 1060 aaKnown RBP12.65□□□□□ -0.38
SPIDR-224ENST00000524126 PPRC1Q5VV67 1664 aaKnown RBP12.64□□□□□ -0.39
SPIDR-224ENST00000524126 BAG4O95429 457 aaKnown RBP12.64□□□□□ -0.39
SPIDR-224ENST00000524126 SENP3Q9H4L4 574 aaPredicted RBP12.64□□□□□ -0.39
SPIDR-224ENST00000524126 IBTKQ9P2D0 1353 aaPredicted RBP12.64□□□□□ -0.39
SPIDR-224ENST00000524126 A2MP01023 1474 aa12.64□□□□□ -0.39
SPIDR-224ENST00000524126 E9PSI1 815 aa12.64□□□□□ -0.39
SPIDR-224ENST00000524126 MCTP1Q6DN14 999 aa12.64□□□□□ -0.39
SPIDR-224ENST00000524126 SNX21Q969T3 373 aa12.64□□□□□ -0.39
SPIDR-224ENST00000524126 ZMYM3Q14202 1370 aa12.64□□□□□ -0.39
SPIDR-224ENST00000524126 GOLGA6L22H0YM25 854 aa12.63□□□□□ -0.39
SPIDR-224ENST00000524126 HECW2Q9P2P5 1572 aa12.63□□□□□ -0.39
SPIDR-224ENST00000524126 RICTORQ6R327 1708 aa12.63□□□□□ -0.39
SPIDR-224ENST00000524126 RWDD1Q9H446 243 aaPredicted RBP12.63□□□□□ -0.39
SPIDR-224ENST00000524126 AK9Q5TCS8 1911 aa12.63□□□□□ -0.39
SPIDR-224ENST00000524126 CEP152O94986 1710 aa12.63□□□□□ -0.39
SPIDR-224ENST00000524126 ATP10AO60312 1499 aa12.63□□□□□ -0.39
SPIDR-224ENST00000524126 GAS2L2Q8NHY3 880 aa12.62□□□□□ -0.39
SPIDR-224ENST00000524126 RBM42Q9BTD8 480 aaKnown RBP12.62□□□□□ -0.39
SPIDR-224ENST00000524126 DEPDC5O75140 1603 aa12.62□□□□□ -0.39
SPIDR-224ENST00000524126 COL17A1Q9UMD9 1497 aaPredicted RBP12.62□□□□□ -0.39
SPIDR-224ENST00000524126 CCDC39Q9UFE4 941 aa12.62□□□□□ -0.39
SPIDR-224ENST00000524126 KIF13AQ9H1H9 1805 aa12.62□□□□□ -0.39
SPIDR-224ENST00000524126 CFAP74Q9C0B2 1584 aa12.61□□□□□ -0.39
SPIDR-224ENST00000524126 NEO1Q92859 1461 aa12.61□□□□□ -0.39
SPIDR-224ENST00000524126 TRHP20396 242 aaPredicted RBP12.61□□□□□ -0.39
SPIDR-224ENST00000524126 C17orf53Q8N3J3 647 aaPredicted RBP12.61□□□□□ -0.39
SPIDR-224ENST00000524126 U2AF2P26368 475 aaKnown RBP eCLIP12.6□□□□□ -0.39
SPIDR-224ENST00000524126 MCM5P33992 734 aa12.6□□□□□ -0.39
SPIDR-224ENST00000524126 RNF214Q8ND24 703 aa12.6□□□□□ -0.39
SPIDR-224ENST00000524126 TESK2Q96S53 571 aa12.6□□□□□ -0.39
SPIDR-224ENST00000524126 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.6□□□□□ -0.39
SPIDR-224ENST00000524126 MLH3Q9UHC1 1453 aa12.6□□□□□ -0.39
SPIDR-224ENST00000524126 CDK11BP21127 795 aaKnown RBP12.6□□□□□ -0.39
SPIDR-224ENST00000524126 RBM25P49756 843 aaKnown RBP12.6□□□□□ -0.39
SPIDR-224ENST00000524126 NINLQ9Y2I6 1382 aa12.6□□□□□ -0.39
SPIDR-224ENST00000524126 KIAA2012Q0VF49 1180 aa12.59□□□□□ -0.39
SPIDR-224ENST00000524126 ZNF771Q7L3S4 317 aaPredicted RBP12.59□□□□□ -0.39
SPIDR-224ENST00000524126 KIF2CQ99661 725 aa12.59□□□□□ -0.39
SPIDR-224ENST00000524126 DIP2CQ9Y2E4 1556 aa12.59□□□□□ -0.39
SPIDR-224ENST00000524126 GLI2P10070 1586 aa12.59□□□□□ -0.39
SPIDR-224ENST00000524126 PTMAP06454 111 aaKnown RBP12.59□□□□□ -0.39
SPIDR-224ENST00000524126 BCL2L12Q9HB09 334 aa12.59□□□□□ -0.39
SPIDR-224ENST00000524126 CHAMP1Q96JM3 812 aa12.58□□□□□ -0.39
SPIDR-224ENST00000524126 LMBRD1Q9NUN5 540 aa12.58□□□□□ -0.39
SPIDR-224ENST00000524126 CLTCL1P53675 1640 aa12.58□□□□□ -0.39
SPIDR-224ENST00000524126 PRDM15P57071 1507 aaPredicted RBP12.58□□□□□ -0.4
SPIDR-224ENST00000524126 K7ELQ4 463 aaPredicted RBP12.58□□□□□ -0.4
SPIDR-224ENST00000524126 RARSP54136 660 aaKnown RBP12.58□□□□□ -0.4
SPIDR-224ENST00000524126 IRX5P78411 483 aaPredicted RBP12.58□□□□□ -0.4
SPIDR-224ENST00000524126 MLECQ14165 292 aa12.58□□□□□ -0.4
SPIDR-224ENST00000524126 VWDEQ8N2E2 1590 aa12.58□□□□□ -0.4
SPIDR-224ENST00000524126 CHMP4AQ9BY43 222 aa12.58□□□□□ -0.4
SPIDR-224ENST00000524126 SYCE3A1L190 88 aa12.57□□□□□ -0.4
SPIDR-224ENST00000524126 PDCL2Q8N4E4 241 aa12.57□□□□□ -0.4
SPIDR-224ENST00000524126 SPHKAPQ2M3C7 1700 aa12.57□□□□□ -0.4
SPIDR-224ENST00000524126 SIGLEC1Q9BZZ2 1709 aa12.57□□□□□ -0.4
SPIDR-224ENST00000524126 KANK1Q14678 1352 aa12.57□□□□□ -0.4
SPIDR-224ENST00000524126 CHGAP10645 457 aaKnown RBP12.57□□□□□ -0.4
SPIDR-224ENST00000524126 PKP1Q13835 747 aa12.57□□□□□ -0.4
SPIDR-224ENST00000524126 NEUROD2Q15784 382 aa12.57□□□□□ -0.4
SPIDR-224ENST00000524126 NUTM2DQ5VT03 806 aaPredicted RBP12.57□□□□□ -0.4
SPIDR-224ENST00000524126 GPT2Q8TD30 523 aa12.57□□□□□ -0.4
SPIDR-224ENST00000524126 KNSTRNQ9Y448 316 aa12.57□□□□□ -0.4
SPIDR-224ENST00000524126 TET3O43151 1660 aa12.56□□□□□ -0.4
SPIDR-224ENST00000524126 KCNJ4P48050 445 aa12.56□□□□□ -0.4
SPIDR-224ENST00000524126 CLEC17AQ6ZS10 378 aa12.56□□□□□ -0.4
SPIDR-224ENST00000524126 NSFL1CQ9UNZ2 370 aaKnown RBP12.56□□□□□ -0.4
SPIDR-224ENST00000524126 KIF3AQ9Y496 699 aa12.56□□□□□ -0.4
SPIDR-224ENST00000524126 PRPF40AO75400 957 aaKnown RBP12.55□□□□□ -0.4
SPIDR-224ENST00000524126 GTF2F1P35269 517 aaKnown RBP eCLIP12.55□□□□□ -0.42e-13■■■■□ 26.1
SPIDR-224ENST00000524126 TAF3Q5VWG9 929 aa12.55□□□□□ -0.4
SPIDR-224ENST00000524126 PRIMPOLQ96LW4 560 aa12.55□□□□□ -0.4
SPIDR-224ENST00000524126 TMEM63CQ9P1W3 806 aa12.55□□□□□ -0.4
SPIDR-224ENST00000524126 EIF2AK4Q9P2K8 1649 aaKnown RBP12.55□□□□□ -0.4
SPIDR-224ENST00000524126 FTSJ3Q8IY81 847 aaKnown RBP12.55□□□□□ -0.4
SPIDR-224ENST00000524126 RRP7AQ9Y3A4 280 aaKnown RBP12.55□□□□□ -0.4
SPIDR-224ENST00000524126 NPATQ14207 1427 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms