RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 DEFB132Q7Z7B7 95 aa12.73□□□□□ -0.37
CTNNA1-240ENST00000523912 CCDC61Q9Y6R9 512 aa12.73□□□□□ -0.37
CTNNA1-240ENST00000523912 ITSN1Q15811 1721 aa12.73□□□□□ -0.37
CTNNA1-240ENST00000523912 PLCH1Q4KWH8 1693 aa12.73□□□□□ -0.37
CTNNA1-240ENST00000523912 LRP5O75197 1615 aa12.73□□□□□ -0.37
CTNNA1-240ENST00000523912 ABCA3Q99758 1704 aa12.72□□□□□ -0.37
CTNNA1-240ENST00000523912 SRPK2P78362 688 aaKnown RBP12.72□□□□□ -0.37
CTNNA1-240ENST00000523912 NBPF1Q3BBV0 1214 aa12.72□□□□□ -0.37
CTNNA1-240ENST00000523912 L3MBTL2Q969R5 705 aa12.71□□□□□ -0.37
CTNNA1-240ENST00000523912 PRDM11Q9NQV5 511 aa12.71□□□□□ -0.37
CTNNA1-240ENST00000523912 TRPM3Q9HCF6 1732 aaPredicted RBP12.71□□□□□ -0.38
CTNNA1-240ENST00000523912 POLR3AO14802 1390 aaPredicted RBP12.7□□□□□ -0.38
CTNNA1-240ENST00000523912 A0A0G2JS52 829 aa12.7□□□□□ -0.38
CTNNA1-240ENST00000523912 MYT1Q01538 1121 aa12.7□□□□□ -0.38
CTNNA1-240ENST00000523912 BTG4Q9NY30 223 aa12.7□□□□□ -0.38
CTNNA1-240ENST00000523912 ROCK2O75116 1388 aaKnown RBP12.69□□□□□ -0.38
CTNNA1-240ENST00000523912 COL14A1Q05707 1796 aaKnown RBP12.69□□□□□ -0.38
CTNNA1-240ENST00000523912 PLEKHG3A1L390 1219 aa12.69□□□□□ -0.38
CTNNA1-240ENST00000523912 NEUROD1Q13562 356 aa12.69□□□□□ -0.38
CTNNA1-240ENST00000523912 ALS2Q96Q42 1657 aa12.69□□□□□ -0.38
CTNNA1-240ENST00000523912 DISP2A7MBM2 1401 aa12.69□□□□□ -0.38
CTNNA1-240ENST00000523912 EP400Q96L91 3159 aa12.69□□□□□ -0.38
CTNNA1-240ENST00000523912 NRAPQ86VF7 1730 aa12.68□□□□□ -0.38
CTNNA1-240ENST00000523912 ACEP12821 1306 aa12.68□□□□□ -0.38
CTNNA1-240ENST00000523912 SPATA31A5Q5VU36 1347 aa12.68□□□□□ -0.38
CTNNA1-240ENST00000523912 SPATA31A7Q8IWB4 1347 aa12.68□□□□□ -0.38
CTNNA1-240ENST00000523912 NBPF8Q3BBV2 869 aa12.68□□□□□ -0.38
CTNNA1-240ENST00000523912 PPIP5K1Q6PFW1 1433 aa12.68□□□□□ -0.38
CTNNA1-240ENST00000523912 FAM98CQ17RN3 349 aaKnown RBP12.67□□□□□ -0.38
CTNNA1-240ENST00000523912 SIN3AQ96ST3 1273 aa12.67□□□□□ -0.38
CTNNA1-240ENST00000523912 BRD4O60885 1362 aaPredicted RBP12.67□□□□□ -0.38
CTNNA1-240ENST00000523912 TOPAZ1Q8N9V7 1692 aa12.67□□□□□ -0.38
CTNNA1-240ENST00000523912 EVC2Q86UK5 1308 aa12.66□□□□□ -0.38
CTNNA1-240ENST00000523912 ABTB2Q8N961 1025 aa12.66□□□□□ -0.38
CTNNA1-240ENST00000523912 CABP2Q9NPB3 220 aa12.66□□□□□ -0.38
CTNNA1-240ENST00000523912 KIAA0232Q92628 1395 aa12.66□□□□□ -0.38
CTNNA1-240ENST00000523912 RGPD1P0DJD0 1748 aa12.65□□□□□ -0.38
CTNNA1-240ENST00000523912 NUTM2GQ5VZR2 741 aa12.64□□□□□ -0.39
CTNNA1-240ENST00000523912 PARD3Q8TEW0 1356 aa12.64□□□□□ -0.39
CTNNA1-240ENST00000523912 TONSLQ96HA7 1378 aa12.64□□□□□ -0.39
CTNNA1-240ENST00000523912 THSD7AQ9UPZ6 1657 aa12.64□□□□□ -0.39
CTNNA1-240ENST00000523912 SRCAPQ6ZRS2 3230 aa12.64□□□□□ -0.39
CTNNA1-240ENST00000523912 NLRP13Q86W25 1043 aa12.63□□□□□ -0.39
CTNNA1-240ENST00000523912 QRICH2Q9H0J4 1663 aa12.63□□□□□ -0.39
CTNNA1-240ENST00000523912 CRYBG1Q9Y4K1 1723 aa12.62□□□□□ -0.39
CTNNA1-240ENST00000523912 ZC3H6P61129 1189 aaKnown RBP12.62□□□□□ -0.39
CTNNA1-240ENST00000523912 CHRNA2Q15822 529 aa12.62□□□□□ -0.39
CTNNA1-240ENST00000523912 FAM196AQ6ZSG2 479 aa12.62□□□□□ -0.39
CTNNA1-240ENST00000523912 STRN4Q9NRL3 753 aa12.62□□□□□ -0.39
CTNNA1-240ENST00000523912 CABP1Q9NZU7 370 aa12.62□□□□□ -0.39
CTNNA1-240ENST00000523912 TRPM1Q7Z4N2 1603 aa12.62□□□□□ -0.39
CTNNA1-240ENST00000523912 USP19O94966 1318 aa12.62□□□□□ -0.39
CTNNA1-240ENST00000523912 SPATA31A1Q5TZJ5 1347 aa12.62□□□□□ -0.39
CTNNA1-240ENST00000523912 CPDO75976 1380 aa12.61□□□□□ -0.39
CTNNA1-240ENST00000523912 EVA1CP58658 441 aa12.61□□□□□ -0.39
CTNNA1-240ENST00000523912 EN1Q05925 392 aaPredicted RBP12.61□□□□□ -0.39
CTNNA1-240ENST00000523912 USP6P35125 1406 aa12.61□□□□□ -0.39
CTNNA1-240ENST00000523912 PHRF1Q9P1Y6 1649 aaKnown RBP12.6□□□□□ -0.39
CTNNA1-240ENST00000523912 PSDA5PKW4 1024 aaPredicted RBP12.6□□□□□ -0.39
CTNNA1-240ENST00000523912 BARGINQ6ZT62 677 aa12.6□□□□□ -0.39
CTNNA1-240ENST00000523912 CAMKK2Q96RR4 588 aa12.6□□□□□ -0.39
CTNNA1-240ENST00000523912 CARD11Q9BXL7 1154 aa12.6□□□□□ -0.39
CTNNA1-240ENST00000523912 NRKQ7Z2Y5 1582 aa12.6□□□□□ -0.39
CTNNA1-240ENST00000523912 C11orf95C9JLR9 678 aaPredicted RBP12.59□□□□□ -0.39
CTNNA1-240ENST00000523912 SSH2Q76I76 1423 aa12.59□□□□□ -0.39
CTNNA1-240ENST00000523912 SBNO2Q9Y2G9 1366 aa12.58□□□□□ -0.4
CTNNA1-240ENST00000523912 GCP02774 474 aa12.58□□□□□ -0.4
CTNNA1-240ENST00000523912 NLRP6P59044 892 aa12.58□□□□□ -0.4
CTNNA1-240ENST00000523912 ZNF692Q9BU19 519 aaPredicted RBP12.58□□□□□ -0.4
CTNNA1-240ENST00000523912 TNS1Q9HBL0 1735 aaKnown RBP12.58□□□□□ -0.4
CTNNA1-240ENST00000523912 TRIM26Q12899 539 aaPredicted RBP12.57□□□□□ -0.4
CTNNA1-240ENST00000523912 R3HDM1Q15032 1099 aaKnown RBP12.57□□□□□ -0.4
CTNNA1-240ENST00000523912 THRAP3Q9Y2W1 955 aaKnown RBP12.57□□□□□ -0.4
CTNNA1-240ENST00000523912 ZBTB7CA1YPR0 619 aa12.56□□□□□ -0.4
CTNNA1-240ENST00000523912 EZH2Q15910 746 aaKnown RBP12.56□□□□□ -0.4
CTNNA1-240ENST00000523912 TCP11L2Q8N4U5 519 aa12.56□□□□□ -0.4
CTNNA1-240ENST00000523912 USP35Q9P2H5 1018 aa12.56□□□□□ -0.4
CTNNA1-240ENST00000523912 TTC21AQ8NDW8 1320 aa12.56□□□□□ -0.4
CTNNA1-240ENST00000523912 TRIM37O94972 964 aa12.55□□□□□ -0.4
CTNNA1-240ENST00000523912 PDE3BQ13370 1112 aa12.55□□□□□ -0.4
CTNNA1-240ENST00000523912 FAM182BQ5T319 152 aa12.55□□□□□ -0.4
CTNNA1-240ENST00000523912 KCNH5Q8NCM2 988 aa12.55□□□□□ -0.4
CTNNA1-240ENST00000523912 APBA3O96018 575 aa12.54□□□□□ -0.4
CTNNA1-240ENST00000523912 LARP1Q6PKG0 1096 aaKnown RBP12.54□□□□□ -0.4
CTNNA1-240ENST00000523912 AATKQ6ZMQ8 1374 aa12.54□□□□□ -0.4
CTNNA1-240ENST00000523912 KTN1Q86UP2 1357 aaKnown RBP12.54□□□□□ -0.4
CTNNA1-240ENST00000523912 SLIT3O75094 1523 aa12.53□□□□□ -0.4
CTNNA1-240ENST00000523912 NBPF14Q5TI25 921 aa12.53□□□□□ -0.4
CTNNA1-240ENST00000523912 CAMTA1Q9Y6Y1 1673 aa12.53□□□□□ -0.4
CTNNA1-240ENST00000523912 TTC21BQ7Z4L5 1316 aa12.53□□□□□ -0.4
CTNNA1-240ENST00000523912 COL5A2P05997 1499 aaPredicted RBP12.53□□□□□ -0.4
CTNNA1-240ENST00000523912 SLC24A1O60721 1099 aa12.52□□□□□ -0.41
CTNNA1-240ENST00000523912 HDGFL2Q7Z4V5 671 aaPredicted RBP12.52□□□□□ -0.41
CTNNA1-240ENST00000523912 TMC1Q8TDI8 760 aa12.52□□□□□ -0.41
CTNNA1-240ENST00000523912 CRB1P82279 1406 aa12.52□□□□□ -0.41
CTNNA1-240ENST00000523912 LMO7Q8WWI1 1683 aa12.51□□□□□ -0.41
CTNNA1-240ENST00000523912 CPSF1Q10570 1443 aaKnown RBP12.51□□□□□ -0.41
CTNNA1-240ENST00000523912 RREB1Q92766 1687 aa12.51□□□□□ -0.41
CTNNA1-240ENST00000523912 SOX12O15370 315 aa12.5□□□□□ -0.41
CTNNA1-240ENST00000523912 CSB-PGBD3P0DP91 1061 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms