RNA–Protein interactions for RNA: ENST00000523908.5

CLINT1-207, Transcript of clathrin interactor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLINT1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-207ENST00000523908 POGKQ9P215 609 aa25.03■■□□□ 1.6
CLINT1-207ENST00000523908 DAXXQ9UER7 740 aaPredicted RBP25.03■■□□□ 1.6
CLINT1-207ENST00000523908 RIMBP3CA6NJZ7 1639 aa25.02■■□□□ 1.6
CLINT1-207ENST00000523908 RIMBP3BA6NNM3 1639 aa25.02■■□□□ 1.6
CLINT1-207ENST00000523908 RIMBP3Q9UFD9 1639 aa25.02■■□□□ 1.6
CLINT1-207ENST00000523908 A2ML1A8K2U0 1454 aa25.02■■□□□ 1.6
CLINT1-207ENST00000523908 TMPOP42166 694 aaKnown RBP25.02■■□□□ 1.6
CLINT1-207ENST00000523908 RLBP1P12271 317 aa25.02■■□□□ 1.6
CLINT1-207ENST00000523908 SAFB2Q14151 953 aaKnown RBP eCLIP25.01■■□□□ 1.59
CLINT1-207ENST00000523908 ZKSCAN2Q63HK3 967 aa25.01■■□□□ 1.59
CLINT1-207ENST00000523908 MINK1Q8N4C8 1332 aaPredicted RBP25.01■■□□□ 1.59
CLINT1-207ENST00000523908 MVPQ14764 893 aaKnown RBP25.01■■□□□ 1.59
CLINT1-207ENST00000523908 GGNBP2Q9H3C7 697 aa25.01■■□□□ 1.59
CLINT1-207ENST00000523908 RWDD1Q9H446 243 aaPredicted RBP25■■□□□ 1.59
CLINT1-207ENST00000523908 TRIM35Q9UPQ4 493 aa24.98■■□□□ 1.59
CLINT1-207ENST00000523908 PCDHB15Q9Y5E8 787 aa24.98■■□□□ 1.59
CLINT1-207ENST00000523908 USP19O94966 1318 aa24.98■■□□□ 1.59
CLINT1-207ENST00000523908 CDK19Q9BWU1 502 aa24.97■■□□□ 1.59
CLINT1-207ENST00000523908 DIAPH1O60610 1272 aaKnown RBP24.96■■□□□ 1.59
CLINT1-207ENST00000523908 KNDC1Q76NI1 1749 aa24.96■■□□□ 1.59
CLINT1-207ENST00000523908 FBXO31Q5XUX0 539 aaPredicted RBP24.96■■□□□ 1.59
CLINT1-207ENST00000523908 DZIP1LQ8IYY4 767 aaKnown RBP24.96■■□□□ 1.59
CLINT1-207ENST00000523908 RIMS2Q9UQ26 1411 aa24.96■■□□□ 1.59
CLINT1-207ENST00000523908 U2SURPO15042 1029 aaKnown RBP24.95■■□□□ 1.58
CLINT1-207ENST00000523908 LRRC7Q96NW7 1537 aa24.95■■□□□ 1.58
CLINT1-207ENST00000523908 PPIP5K1Q6PFW1 1433 aa24.94■■□□□ 1.58
CLINT1-207ENST00000523908 FAM135BQ49AJ0 1406 aa24.94■■□□□ 1.58
CLINT1-207ENST00000523908 NRXN3Q9Y4C0 1643 aa24.93■■□□□ 1.58
CLINT1-207ENST00000523908 FCHSD2O94868 740 aa24.92■■□□□ 1.58
CLINT1-207ENST00000523908 TNNQ9UQP3 1299 aa24.92■■□□□ 1.58
CLINT1-207ENST00000523908 BCL2L13Q9BXK5 485 aa24.92■■□□□ 1.58
CLINT1-207ENST00000523908 FTSJ3Q8IY81 847 aaKnown RBP24.91■■□□□ 1.58
CLINT1-207ENST00000523908 EXOSC9Q06265 439 aaKnown RBP24.91■■□□□ 1.58
CLINT1-207ENST00000523908 ZNF428Q96B54 188 aa24.91■■□□□ 1.58
CLINT1-207ENST00000523908 PDZRN3Q9UPQ7 1066 aa24.91■■□□□ 1.58
CLINT1-207ENST00000523908 HDAC1Q13547 482 aaPredicted RBP24.9■■□□□ 1.58
CLINT1-207ENST00000523908 SMC4Q9NTJ3 1288 aa24.9■■□□□ 1.58
CLINT1-207ENST00000523908 STAG3Q9UJ98 1225 aa24.9■■□□□ 1.58
CLINT1-207ENST00000523908 DDX19BQ9UMR2 479 aa24.9■■□□□ 1.58
CLINT1-207ENST00000523908 CPSF1Q10570 1443 aaKnown RBP24.9■■□□□ 1.58
CLINT1-207ENST00000523908 EDC4Q6P2E9 1401 aaKnown RBP24.9■■□□□ 1.58
CLINT1-207ENST00000523908 NFKBIBQ15653 356 aa24.9■■□□□ 1.58
CLINT1-207ENST00000523908 KIF16BQ96L93 1317 aa24.9■■□□□ 1.58
CLINT1-207ENST00000523908 TSR2Q969E8 191 aaKnown RBP24.89■■□□□ 1.58
CLINT1-207ENST00000523908 CABP1Q9NZU7 370 aa24.89■■□□□ 1.58
CLINT1-207ENST00000523908 ALDH1L2Q3SY69 923 aa24.89■■□□□ 1.57
CLINT1-207ENST00000523908 CDK12Q9NYV4 1490 aaPredicted RBP24.88■■□□□ 1.57
CLINT1-207ENST00000523908 ATF7IPQ6VMQ6 1270 aa24.88■■□□□ 1.57
CLINT1-207ENST00000523908 BRPF1P55201 1214 aaPredicted RBP24.87■■□□□ 1.57
CLINT1-207ENST00000523908 TECPR2O15040 1411 aa24.87■■□□□ 1.57
CLINT1-207ENST00000523908 RIPK4P57078 832 aa24.87■■□□□ 1.57
CLINT1-207ENST00000523908 MON2Q7Z3U7 1717 aa24.87■■□□□ 1.57
CLINT1-207ENST00000523908 TRIM27P14373 513 aa24.86■■□□□ 1.57
CLINT1-207ENST00000523908 FAM69CQ0P6D2 419 aa24.86■■□□□ 1.57
CLINT1-207ENST00000523908 SSH1Q8WYL5 1049 aa24.86■■□□□ 1.57
CLINT1-207ENST00000523908 AATKQ6ZMQ8 1374 aa24.86■■□□□ 1.57
CLINT1-207ENST00000523908 SIRT1Q96EB6 747 aa24.86■■□□□ 1.57
CLINT1-207ENST00000523908 SLC4A3P48751 1232 aa24.85■■□□□ 1.57
CLINT1-207ENST00000523908 BECN1Q14457 450 aa24.85■■□□□ 1.57
CLINT1-207ENST00000523908 CPS1P31327 1500 aa24.85■■□□□ 1.57
CLINT1-207ENST00000523908 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.85■■□□□ 1.57
CLINT1-207ENST00000523908 RSPH6AQ9H0K4 717 aa24.85■■□□□ 1.57
CLINT1-207ENST00000523908 IPO8O15397 1037 aaKnown RBP24.84■■□□□ 1.57
CLINT1-207ENST00000523908 UPF2Q9HAU5 1272 aaKnown RBP24.84■■□□□ 1.57
CLINT1-207ENST00000523908 CALD1Q05682 793 aaKnown RBP24.83■■□□□ 1.56
CLINT1-207ENST00000523908 POLKQ9UBT6 870 aa24.83■■□□□ 1.56
CLINT1-207ENST00000523908 TSPOAP1O95153 1857 aa24.82■■□□□ 1.56
CLINT1-207ENST00000523908 MAP2P11137 1827 aaKnown RBP24.82■■□□□ 1.56
CLINT1-207ENST00000523908 AKAP12Q02952 1782 aa24.82■■□□□ 1.56
CLINT1-207ENST00000523908 TBC1D32Q96NH3 1257 aa24.81■■□□□ 1.56
CLINT1-207ENST00000523908 SEC24BO95487 1268 aa24.81■■□□□ 1.56
CLINT1-207ENST00000523908 CYB5RLQ6IPT4 315 aa24.81■■□□□ 1.56
CLINT1-207ENST00000523908 SMC5Q8IY18 1101 aa24.79■■□□□ 1.56
CLINT1-207ENST00000523908 C3P01024 1663 aa24.78■■□□□ 1.56
CLINT1-207ENST00000523908 WASLO00401 505 aaPredicted RBP24.78■■□□□ 1.56
CLINT1-207ENST00000523908 NFE2L2Q16236 605 aa24.78■■□□□ 1.56
CLINT1-207ENST00000523908 NOB1Q9ULX3 412 aaKnown RBP24.78■■□□□ 1.56
CLINT1-207ENST00000523908 PIK3R4Q99570 1358 aa24.77■■□□□ 1.56
CLINT1-207ENST00000523908 ITSN1Q15811 1721 aa24.77■■□□□ 1.56
CLINT1-207ENST00000523908 ZBTB40Q9NUA8 1239 aa24.77■■□□□ 1.56
CLINT1-207ENST00000523908 PRKAR2BP31323 418 aa24.77■■□□□ 1.56
CLINT1-207ENST00000523908 NRKQ7Z2Y5 1582 aa24.76■■□□□ 1.55
CLINT1-207ENST00000523908 GSE1Q14687 1217 aa24.76■■□□□ 1.55
CLINT1-207ENST00000523908 WAPLQ7Z5K2 1190 aa24.76■■□□□ 1.55
CLINT1-207ENST00000523908 ITPRIPQ8IWB1 547 aa24.76■■□□□ 1.55
CLINT1-207ENST00000523908 PTCH1Q13635 1447 aa24.76■■□□□ 1.55
CLINT1-207ENST00000523908 CHMP4BQ9H444 224 aaKnown RBP24.75■■□□□ 1.55
CLINT1-207ENST00000523908 ARHGAP45Q92619 1136 aa24.74■■□□□ 1.55
CLINT1-207ENST00000523908 TMEM57Q8N5G2 664 aa24.74■■□□□ 1.55
CLINT1-207ENST00000523908 METP08581 1390 aa24.73■■□□□ 1.55
CLINT1-207ENST00000523908 IL13P35225 146 aa24.73■■□□□ 1.55
CLINT1-207ENST00000523908 HDGFP51858 240 aaKnown RBP24.73■■□□□ 1.55
CLINT1-207ENST00000523908 IFT57Q9NWB7 429 aa24.73■■□□□ 1.55
CLINT1-207ENST00000523908 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.72■■□□□ 1.55
CLINT1-207ENST00000523908 LMOD3Q0VAK6 560 aa24.71■■□□□ 1.55
CLINT1-207ENST00000523908 SENP3Q9H4L4 574 aaPredicted RBP24.71■■□□□ 1.55
CLINT1-207ENST00000523908 GNAI1P63096 354 aa24.7■■□□□ 1.55
CLINT1-207ENST00000523908 ZNF853P0CG23 659 aa24.7■■□□□ 1.54
CLINT1-207ENST00000523908 TOPAZ1Q8N9V7 1692 aa24.69■■□□□ 1.54
CLINT1-207ENST00000523908 UBR1Q8IWV7 1749 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms