RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 WASF2Q9Y6W5 498 aa10.19□□□□□ -0.78
NSMCE2-211ENST00000523549 VARSP26640 1264 aaKnown RBP10.18□□□□□ -0.78
NSMCE2-211ENST00000523549 TRIM46Q7Z4K8 759 aa10.18□□□□□ -0.78
NSMCE2-211ENST00000523549 CAPN5O15484 640 aaPredicted RBP10.17□□□□□ -0.78
NSMCE2-211ENST00000523549 PRPF38BQ5VTL8 546 aaKnown RBP10.17□□□□□ -0.78
NSMCE2-211ENST00000523549 F12P00748 615 aaPredicted RBP10.16□□□□□ -0.78
NSMCE2-211ENST00000523549 RIC3Q7Z5B4 369 aa10.16□□□□□ -0.78
NSMCE2-211ENST00000523549 ZBTB3Q9H5J0 574 aa10.15□□□□□ -0.78
NSMCE2-211ENST00000523549 TLL2Q9Y6L7 1015 aa10.15□□□□□ -0.78
NSMCE2-211ENST00000523549 PLEKHG3A1L390 1219 aa10.13□□□□□ -0.79
NSMCE2-211ENST00000523549 BMP1P13497 986 aa10.13□□□□□ -0.79
NSMCE2-211ENST00000523549 TUSC1Q2TAM9 212 aa10.13□□□□□ -0.79
NSMCE2-211ENST00000523549 CABLES1Q8TDN4 633 aa10.13□□□□□ -0.79
NSMCE2-211ENST00000523549 CTHP32929 405 aa10.12□□□□□ -0.79
NSMCE2-211ENST00000523549 PDE4DQ08499 809 aa10.12□□□□□ -0.79
NSMCE2-211ENST00000523549 KLF16Q9BXK1 252 aaPredicted RBP10.12□□□□□ -0.79
NSMCE2-211ENST00000523549 MYSM1Q5VVJ2 828 aa10.11□□□□□ -0.79
NSMCE2-211ENST00000523549 CDK15Q96Q40 435 aa10.11□□□□□ -0.79
NSMCE2-211ENST00000523549 MAP10Q9P2G4 905 aa10.11□□□□□ -0.79
NSMCE2-211ENST00000523549 LIMD1Q9UGP4 676 aa10.11□□□□□ -0.79
NSMCE2-211ENST00000523549 PER1O15534 1290 aaPredicted RBP10.1□□□□□ -0.79
NSMCE2-211ENST00000523549 NNTQ13423 1086 aa10.1□□□□□ -0.79
NSMCE2-211ENST00000523549 LILRB3O75022 631 aa10.09□□□□□ -0.79
NSMCE2-211ENST00000523549 FOXJ1Q92949 421 aa10.09□□□□□ -0.79
NSMCE2-211ENST00000523549 NXF1Q9UBU9 619 aaKnown RBP10.09□□□□□ -0.79
NSMCE2-211ENST00000523549 QPCTQ16769 361 aa10.08□□□□□ -0.8
NSMCE2-211ENST00000523549 C4orf48Q5BLP8 95 aa10.08□□□□□ -0.8
NSMCE2-211ENST00000523549 FAM174AQ8TBP5 190 aa10.08□□□□□ -0.8
NSMCE2-211ENST00000523549 ZFP42Q96MM3 310 aa10.08□□□□□ -0.8
NSMCE2-211ENST00000523549 TIMP2P16035 220 aa10.07□□□□□ -0.8
NSMCE2-211ENST00000523549 INSM1Q01101 510 aaPredicted RBP10.07□□□□□ -0.8
NSMCE2-211ENST00000523549 CSPP1Q1MSJ5 1256 aa10.07□□□□□ -0.8
NSMCE2-211ENST00000523549 SLC24A3Q9HC58 644 aa10.07□□□□□ -0.8
NSMCE2-211ENST00000523549 ADH1CP00326 375 aa10.06□□□□□ -0.8
NSMCE2-211ENST00000523549 NPAS3Q8IXF0 933 aa10.06□□□□□ -0.8
NSMCE2-211ENST00000523549 STK17AQ9UEE5 414 aa10.05□□□□□ -0.8
NSMCE2-211ENST00000523549 GRM5P41594 1212 aa10.04□□□□□ -0.8
NSMCE2-211ENST00000523549 WDR4P57081 412 aaKnown RBP10.04□□□□□ -0.8
NSMCE2-211ENST00000523549 MRPL14Q6P1L8 145 aaKnown RBP10.04□□□□□ -0.8
NSMCE2-211ENST00000523549 RTL5Q5HYW3 569 aaPredicted RBP10.03□□□□□ -0.8
NSMCE2-211ENST00000523549 SLC16A10Q8TF71 515 aa10.03□□□□□ -0.8
NSMCE2-211ENST00000523549 NUTM2BA6NNL0 878 aaPredicted RBP10.02□□□□□ -0.81
NSMCE2-211ENST00000523549 NUTM2EB1AL46 878 aaPredicted RBP10.02□□□□□ -0.81
NSMCE2-211ENST00000523549 NR5A1Q13285 461 aa10.02□□□□□ -0.81
NSMCE2-211ENST00000523549 NUTM2DQ5VT03 806 aaPredicted RBP10.02□□□□□ -0.81
NSMCE2-211ENST00000523549 SH3RF1Q7Z6J0 888 aa10.02□□□□□ -0.81
NSMCE2-211ENST00000523549 BPHLQ86WA6 291 aaPredicted RBP10.02□□□□□ -0.81
NSMCE2-211ENST00000523549 NUTM2AQ8IVF1 878 aaPredicted RBP10.02□□□□□ -0.81
NSMCE2-211ENST00000523549 H3BM21 787 aa10.01□□□□□ -0.81
NSMCE2-211ENST00000523549 NR3C2P08235 984 aa10.01□□□□□ -0.81
NSMCE2-211ENST00000523549 C1QTNF2Q9BXJ5 285 aa10.01□□□□□ -0.81
NSMCE2-211ENST00000523549 LORP23490 312 aaPredicted RBP10□□□□□ -0.81
NSMCE2-211ENST00000523549 ARMC2Q8NEN0 867 aa10□□□□□ -0.81
NSMCE2-211ENST00000523549 ARID5BQ14865 1188 aa9.99□□□□□ -0.81
NSMCE2-211ENST00000523549 ITPKCQ96DU7 683 aa9.99□□□□□ -0.81
NSMCE2-211ENST00000523549 GMPRP36959 345 aa9.98□□□□□ -0.81
NSMCE2-211ENST00000523549 CLK2P49760 499 aaKnown RBP9.98□□□□□ -0.81
NSMCE2-211ENST00000523549 SCARF1Q14162 830 aa9.98□□□□□ -0.81
NSMCE2-211ENST00000523549 AGERQ15109 404 aa9.98□□□□□ -0.81
NSMCE2-211ENST00000523549 SH3BP5LQ7L8J4 393 aa9.98□□□□□ -0.81
NSMCE2-211ENST00000523549 TSC1Q92574 1164 aa9.98□□□□□ -0.81
NSMCE2-211ENST00000523549 IRF7Q92985 503 aa9.98□□□□□ -0.81
NSMCE2-211ENST00000523549 PURBQ96QR8 312 aaKnown RBP9.98□□□□□ -0.81
NSMCE2-211ENST00000523549 RSPH6AQ9H0K4 717 aa9.98□□□□□ -0.81
NSMCE2-211ENST00000523549 ZFAND3Q9H8U3 227 aa9.98□□□□□ -0.81
NSMCE2-211ENST00000523549 ZIC2O95409 532 aaPredicted RBP9.97□□□□□ -0.81
NSMCE2-211ENST00000523549 VEGFBP49765 207 aa9.97□□□□□ -0.81
NSMCE2-211ENST00000523549 TRMT44Q8IYL2 757 aaKnown RBP9.96□□□□□ -0.82
NSMCE2-211ENST00000523549 HELBQ8NG08 1087 aaPredicted RBP9.96□□□□□ -0.82
NSMCE2-211ENST00000523549 POLR3EQ9NVU0 708 aa9.96□□□□□ -0.82
NSMCE2-211ENST00000523549 ERBB4Q15303 1308 aa9.96□□□□□ -0.82
NSMCE2-211ENST00000523549 MAP4K5Q9Y4K4 846 aa9.95□□□□□ -0.82
NSMCE2-211ENST00000523549 SOBPA7XYQ1 873 aa9.94□□□□□ -0.82
NSMCE2-211ENST00000523549 CTDSPL2Q05D32 466 aa9.94□□□□□ -0.82
NSMCE2-211ENST00000523549 NBPF14Q5TI25 921 aa9.94□□□□□ -0.82
NSMCE2-211ENST00000523549 GPKOWQ92917 476 aaPredicted RBP eCLIP9.93□□□□□ -0.82
NSMCE2-211ENST00000523549 FBXO31Q5XUX0 539 aaPredicted RBP9.92□□□□□ -0.82
NSMCE2-211ENST00000523549 MEIOBQ8N635 442 aa9.91□□□□□ -0.82
NSMCE2-211ENST00000523549 VSIG8P0DPA2 414 aa9.9□□□□□ -0.82
NSMCE2-211ENST00000523549 SKIV2LQ15477 1246 aaKnown RBP9.9□□□□□ -0.82
NSMCE2-211ENST00000523549 PDXDC2PQ6P474 469 aa9.89□□□□□ -0.83
NSMCE2-211ENST00000523549 VASH1Q7L8A9 365 aaPredicted RBP9.89□□□□□ -0.83
NSMCE2-211ENST00000523549 ZSCAN1Q8NBB4 408 aa9.89□□□□□ -0.83
NSMCE2-211ENST00000523549 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.89□□□□□ -0.83
NSMCE2-211ENST00000523549 FSHRP23945 695 aa9.88□□□□□ -0.83
NSMCE2-211ENST00000523549 ERFEQ4G0M1 354 aa9.88□□□□□ -0.83
NSMCE2-211ENST00000523549 C6orf118Q5T5N4 469 aa9.88□□□□□ -0.83
NSMCE2-211ENST00000523549 LINC00528Q8N1L1 170 aa9.88□□□□□ -0.83
NSMCE2-211ENST00000523549 SOS2Q07890 1332 aaPredicted RBP9.87□□□□□ -0.83
NSMCE2-211ENST00000523549 MAGEB6P1A0A0J9YX57 407 aa9.87□□□□□ -0.83
NSMCE2-211ENST00000523549 PPP2R2DQ66LE6 453 aa9.87□□□□□ -0.83
NSMCE2-211ENST00000523549 LRRN4Q8WUT4 740 aa9.87□□□□□ -0.83
NSMCE2-211ENST00000523549 EMILIN1Q9Y6C2 1016 aa9.87□□□□□ -0.83
NSMCE2-211ENST00000523549 BMP2P12643 396 aa9.86□□□□□ -0.83
NSMCE2-211ENST00000523549 SH3D19Q5HYK7 790 aa9.86□□□□□ -0.83
NSMCE2-211ENST00000523549 CCDC116Q8IYX3 515 aa9.86□□□□□ -0.83
NSMCE2-211ENST00000523549 PROCA1Q8NCQ7 364 aaPredicted RBP9.86□□□□□ -0.83
NSMCE2-211ENST00000523549 MAN1A2O60476 641 aa9.85□□□□□ -0.83
NSMCE2-211ENST00000523549 FKBPLQ9UIM3 349 aa9.85□□□□□ -0.83
NSMCE2-211ENST00000523549 UPP2O95045 317 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms