RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 YTHDC2Q9H6S0 1430 aaKnown RBP22.82■■□□□ 1.24
IKBKB-228ENST00000523517 SMC4Q9NTJ3 1288 aa22.82■■□□□ 1.24
IKBKB-228ENST00000523517 CD163L1Q9NR16 1453 aa22.81■■□□□ 1.24
IKBKB-228ENST00000523517 VIRMAQ69YN4 1812 aaKnown RBP22.81■■□□□ 1.24
IKBKB-228ENST00000523517 TMEM131LA2VDJ0 1609 aa22.8■■□□□ 1.24
IKBKB-228ENST00000523517 NLRP1Q9C000 1473 aa22.8■■□□□ 1.24
IKBKB-228ENST00000523517 IL16Q14005 1332 aa22.8■■□□□ 1.24
IKBKB-228ENST00000523517 RICTORQ6R327 1708 aa22.79■■□□□ 1.24
IKBKB-228ENST00000523517 FRAT2O75474 233 aaPredicted RBP22.79■■□□□ 1.24
IKBKB-228ENST00000523517 BECN1Q14457 450 aa22.79■■□□□ 1.24
IKBKB-228ENST00000523517 HDGFL2Q7Z4V5 671 aaPredicted RBP22.78■■□□□ 1.24
IKBKB-228ENST00000523517 SSH1Q8WYL5 1049 aa22.78■■□□□ 1.24
IKBKB-228ENST00000523517 DIAPH1O60610 1272 aaKnown RBP22.77■■□□□ 1.24
IKBKB-228ENST00000523517 TRIM27P14373 513 aa22.77■■□□□ 1.24
IKBKB-228ENST00000523517 UPF2Q9HAU5 1272 aaKnown RBP22.77■■□□□ 1.24
IKBKB-228ENST00000523517 CDK19Q9BWU1 502 aa22.77■■□□□ 1.24
IKBKB-228ENST00000523517 PNPLA6Q8IY17 1366 aa22.76■■□□□ 1.23
IKBKB-228ENST00000523517 RIPK4P57078 832 aa22.76■■□□□ 1.23
IKBKB-228ENST00000523517 FBXO31Q5XUX0 539 aaPredicted RBP22.76■■□□□ 1.23
IKBKB-228ENST00000523517 PREX1Q8TCU6 1659 aa22.76■■□□□ 1.23
IKBKB-228ENST00000523517 PNNQ9H307 717 aaKnown RBP22.76■■□□□ 1.23
IKBKB-228ENST00000523517 TBC1D32Q96NH3 1257 aa22.75■■□□□ 1.23
IKBKB-228ENST00000523517 ATF7IPQ6VMQ6 1270 aa22.75■■□□□ 1.23
IKBKB-228ENST00000523517 CLTCQ00610 1675 aaKnown RBP22.74■■□□□ 1.23
IKBKB-228ENST00000523517 CABP1Q9NZU7 370 aa22.74■■□□□ 1.23
IKBKB-228ENST00000523517 DDX19BQ9UMR2 479 aa22.74■■□□□ 1.23
IKBKB-228ENST00000523517 HDAC1Q13547 482 aaPredicted RBP22.74■■□□□ 1.23
IKBKB-228ENST00000523517 IL27Q8NEV9 243 aa22.74■■□□□ 1.23
IKBKB-228ENST00000523517 ARHGEF40Q8TER5 1519 aa22.73■■□□□ 1.23
IKBKB-228ENST00000523517 NOB1Q9ULX3 412 aaKnown RBP22.73■■□□□ 1.23
IKBKB-228ENST00000523517 ITPRIPQ8IWB1 547 aa22.72■■□□□ 1.23
IKBKB-228ENST00000523517 ALKQ9UM73 1620 aa22.72■■□□□ 1.23
IKBKB-228ENST00000523517 MYO5BQ9ULV0 1848 aa22.71■■□□□ 1.23
IKBKB-228ENST00000523517 ANKRD26Q9UPS8 1709 aa22.7■■□□□ 1.22
IKBKB-228ENST00000523517 FCHSD2O94868 740 aa22.7■■□□□ 1.22
IKBKB-228ENST00000523517 STAG3Q9UJ98 1225 aa22.7■■□□□ 1.22
IKBKB-228ENST00000523517 KIF16BQ96L93 1317 aa22.68■■□□□ 1.22
IKBKB-228ENST00000523517 IPO8O15397 1037 aaKnown RBP22.68■■□□□ 1.22
IKBKB-228ENST00000523517 TMEM57Q8N5G2 664 aa22.68■■□□□ 1.22
IKBKB-228ENST00000523517 ALDH1L2Q3SY69 923 aa22.66■■□□□ 1.22
IKBKB-228ENST00000523517 ZBTB40Q9NUA8 1239 aa22.66■■□□□ 1.22
IKBKB-228ENST00000523517 SMC5Q8IY18 1101 aa22.65■■□□□ 1.22
IKBKB-228ENST00000523517 RSPH6AQ9H0K4 717 aa22.65■■□□□ 1.22
IKBKB-228ENST00000523517 POLKQ9UBT6 870 aa22.65■■□□□ 1.22
IKBKB-228ENST00000523517 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.65■■□□□ 1.22
IKBKB-228ENST00000523517 TBC1D2Q9BYX2 928 aa22.65■■□□□ 1.22
IKBKB-228ENST00000523517 SLKQ9H2G2 1235 aaPredicted RBP22.65■■□□□ 1.22
IKBKB-228ENST00000523517 ANTXR1Q9H6X2 564 aa22.65■■□□□ 1.22
IKBKB-228ENST00000523517 PRKAR2BP31323 418 aa22.64■■□□□ 1.21
IKBKB-228ENST00000523517 CDC42BPGQ6DT37 1551 aa22.64■■□□□ 1.21
IKBKB-228ENST00000523517 WAPLQ7Z5K2 1190 aa22.63■■□□□ 1.21
IKBKB-228ENST00000523517 FAM135BQ49AJ0 1406 aa22.62■■□□□ 1.21
IKBKB-228ENST00000523517 ATP7BP35670 1465 aa22.62■■□□□ 1.21
IKBKB-228ENST00000523517 FBLN1P23142 703 aa22.62■■□□□ 1.21
IKBKB-228ENST00000523517 LRRC7Q96NW7 1537 aa22.62■■□□□ 1.21
IKBKB-228ENST00000523517 DLC1Q96QB1 1528 aa22.62■■□□□ 1.21
IKBKB-228ENST00000523517 BRPF3Q9ULD4 1205 aa22.61■■□□□ 1.21
IKBKB-228ENST00000523517 ZNF428Q96B54 188 aa22.6■■□□□ 1.21
IKBKB-228ENST00000523517 PPP6R1Q9UPN7 881 aa22.6■■□□□ 1.21
IKBKB-228ENST00000523517 BRPF1P55201 1214 aaPredicted RBP22.6■■□□□ 1.21
IKBKB-228ENST00000523517 NFE2L2Q16236 605 aa22.59■■□□□ 1.21
IKBKB-228ENST00000523517 C22orf23Q9BZE7 217 aa22.59■■□□□ 1.21
IKBKB-228ENST00000523517 A2ML1A8K2U0 1454 aa22.59■■□□□ 1.21
IKBKB-228ENST00000523517 KIF20BQ96Q89 1820 aa22.58■■□□□ 1.21
IKBKB-228ENST00000523517 PPIP5K1Q6PFW1 1433 aa22.58■■□□□ 1.21
IKBKB-228ENST00000523517 PHACTR3Q96KR7 559 aa22.58■■□□□ 1.21
IKBKB-228ENST00000523517 MFAP1P55081 439 aaKnown RBP22.57■■□□□ 1.2
IKBKB-228ENST00000523517 RIMS2Q9UQ26 1411 aa22.57■■□□□ 1.2
IKBKB-228ENST00000523517 NUCB1Q02818 461 aa22.56■■□□□ 1.2
IKBKB-228ENST00000523517 RTN4Q9NQC3 1192 aaKnown RBP22.56■■□□□ 1.2
IKBKB-228ENST00000523517 HMOX1P09601 288 aa22.56■■□□□ 1.2
IKBKB-228ENST00000523517 CALD1Q05682 793 aaKnown RBP22.56■■□□□ 1.2
IKBKB-228ENST00000523517 VAMP4O75379 141 aa22.54■■□□□ 1.2
IKBKB-228ENST00000523517 IL13P35225 146 aa22.54■■□□□ 1.2
IKBKB-228ENST00000523517 FAM69CQ0P6D2 419 aa22.54■■□□□ 1.2
IKBKB-228ENST00000523517 EMILIN1Q9Y6C2 1016 aa22.54■■□□□ 1.2
IKBKB-228ENST00000523517 CPSF1Q10570 1443 aaKnown RBP22.54■■□□□ 1.2
IKBKB-228ENST00000523517 AGLP35573 1532 aa22.53■■□□□ 1.2
IKBKB-228ENST00000523517 CYB5RLQ6IPT4 315 aa22.53■■□□□ 1.2
IKBKB-228ENST00000523517 MRPL50Q8N5N7 158 aaKnown RBP22.53■■□□□ 1.2
IKBKB-228ENST00000523517 THUMPD2Q9BTF0 503 aaKnown RBP22.53■■□□□ 1.2
IKBKB-228ENST00000523517 EDC4Q6P2E9 1401 aaKnown RBP22.53■■□□□ 1.2
IKBKB-228ENST00000523517 WASLO00401 505 aaPredicted RBP22.53■■□□□ 1.2
IKBKB-228ENST00000523517 NME9Q86XW9 330 aa22.52■■□□□ 1.2
IKBKB-228ENST00000523517 ARHGAP45Q92619 1136 aa22.52■■□□□ 1.2
IKBKB-228ENST00000523517 IFT57Q9NWB7 429 aa22.52■■□□□ 1.2
IKBKB-228ENST00000523517 GNAI1P63096 354 aa22.52■■□□□ 1.19
IKBKB-228ENST00000523517 REREQ9P2R6 1566 aa22.51■■□□□ 1.19
IKBKB-228ENST00000523517 ZBTB7BO15156 539 aaPredicted RBP22.51■■□□□ 1.19
IKBKB-228ENST00000523517 CHD1LQ86WJ1 897 aa22.51■■□□□ 1.19
IKBKB-228ENST00000523517 SPATA31D1Q6ZQQ2 1576 aa22.51■■□□□ 1.19
IKBKB-228ENST00000523517 LNPKQ9C0E8 428 aa22.5■■□□□ 1.19
IKBKB-228ENST00000523517 CHMP4BQ9H444 224 aaKnown RBP22.5■■□□□ 1.19
IKBKB-228ENST00000523517 ZNF853P0CG23 659 aa22.5■■□□□ 1.19
IKBKB-228ENST00000523517 TSPYL6Q8N831 410 aa22.5■■□□□ 1.19
IKBKB-228ENST00000523517 AATKQ6ZMQ8 1374 aa22.5■■□□□ 1.19
IKBKB-228ENST00000523517 PIK3R4Q99570 1358 aa22.49■■□□□ 1.19
IKBKB-228ENST00000523517 ZRANB1Q9UGI0 708 aa22.49■■□□□ 1.19
IKBKB-228ENST00000523517 CDK12Q9NYV4 1490 aaPredicted RBP22.48■■□□□ 1.19
IKBKB-228ENST00000523517 SPRYD3Q8NCJ5 442 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms