RNA–Protein interactions for RNA: ENST00000523514.1

FAM49B-227, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 4

Gene FAM49B, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-227ENST00000523514 JCADQ9P266 1359 aa11.02□□□□□ -0.65
FAM49B-227ENST00000523514 NPHP3Q7Z494 1330 aa11.01□□□□□ -0.65
FAM49B-227ENST00000523514 MINK1Q8N4C8 1332 aaPredicted RBP11.01□□□□□ -0.65
FAM49B-227ENST00000523514 MED1Q15648 1581 aaPredicted RBP11□□□□□ -0.65
FAM49B-227ENST00000523514 USP32Q8NFA0 1604 aa11□□□□□ -0.65
FAM49B-227ENST00000523514 WASLO00401 505 aaPredicted RBP11□□□□□ -0.65
FAM49B-227ENST00000523514 NBPF8Q3BBV2 869 aa11□□□□□ -0.65
FAM49B-227ENST00000523514 ESCO1Q5FWF5 840 aa11□□□□□ -0.65
FAM49B-227ENST00000523514 ORAI2Q96SN7 254 aa11□□□□□ -0.65
FAM49B-227ENST00000523514 CIZ1Q9ULV3 898 aaPredicted RBP11□□□□□ -0.65
FAM49B-227ENST00000523514 RGPD8O14715 1765 aaPredicted RBP11□□□□□ -0.65
FAM49B-227ENST00000523514 RGL2O15211 777 aa10.99□□□□□ -0.65
FAM49B-227ENST00000523514 HAP1P54257 671 aaPredicted RBP10.99□□□□□ -0.65
FAM49B-227ENST00000523514 LRRC59Q96AG4 307 aaKnown RBP10.99□□□□□ -0.65
FAM49B-227ENST00000523514 NUTM2FA1L443 756 aa10.98□□□□□ -0.65
FAM49B-227ENST00000523514 HIRIP3Q9BW71 556 aaPredicted RBP10.98□□□□□ -0.65
FAM49B-227ENST00000523514 CARD11Q9BXL7 1154 aa10.98□□□□□ -0.65
FAM49B-227ENST00000523514 ATP7BP35670 1465 aa10.98□□□□□ -0.65
FAM49B-227ENST00000523514 PHF8Q9UPP1 1060 aa10.97□□□□□ -0.65
FAM49B-227ENST00000523514 SOS2Q07890 1332 aaPredicted RBP10.97□□□□□ -0.65
FAM49B-227ENST00000523514 SPATA31A6Q5VVP1 1343 aa10.97□□□□□ -0.65
FAM49B-227ENST00000523514 SBNO2Q9Y2G9 1366 aa10.97□□□□□ -0.65
FAM49B-227ENST00000523514 PXDNQ92626 1479 aa10.97□□□□□ -0.65
FAM49B-227ENST00000523514 TOPAZ1Q8N9V7 1692 aa10.97□□□□□ -0.65
FAM49B-227ENST00000523514 COL22A1Q8NFW1 1626 aaPredicted RBP10.95□□□□□ -0.66
FAM49B-227ENST00000523514 EVC2Q86UK5 1308 aa10.95□□□□□ -0.66
FAM49B-227ENST00000523514 CDK19Q9BWU1 502 aa10.95□□□□□ -0.66
FAM49B-227ENST00000523514 PNPLA6Q8IY17 1366 aa10.94□□□□□ -0.66
FAM49B-227ENST00000523514 DISP3Q9P2K9 1392 aa10.94□□□□□ -0.66
FAM49B-227ENST00000523514 PRR36Q9H6K5 1346 aa10.94□□□□□ -0.66
FAM49B-227ENST00000523514 FOXO3O43524 673 aa10.94□□□□□ -0.66
FAM49B-227ENST00000523514 DDX17Q92841 729 aaKnown RBP10.94□□□□□ -0.66
FAM49B-227ENST00000523514 SRPK2P78362 688 aaKnown RBP10.93□□□□□ -0.66
FAM49B-227ENST00000523514 PSME1Q06323 249 aa10.93□□□□□ -0.66
FAM49B-227ENST00000523514 NUDT16Q96DE0 195 aaKnown RBP10.93□□□□□ -0.66
FAM49B-227ENST00000523514 CCDC61Q9Y6R9 512 aa10.93□□□□□ -0.66
FAM49B-227ENST00000523514 TNS3Q68CZ2 1445 aa10.92□□□□□ -0.66
FAM49B-227ENST00000523514 SBNO1A3KN83 1393 aa10.92□□□□□ -0.66
FAM49B-227ENST00000523514 GSE1Q14687 1217 aa10.92□□□□□ -0.66
FAM49B-227ENST00000523514 RASEFQ8IZ41 740 aa10.92□□□□□ -0.66
FAM49B-227ENST00000523514 TRPM3Q9HCF6 1732 aaPredicted RBP10.92□□□□□ -0.66
FAM49B-227ENST00000523514 HAX1O00165 279 aa10.91□□□□□ -0.66
FAM49B-227ENST00000523514 EVX2Q03828 476 aa10.91□□□□□ -0.66
FAM49B-227ENST00000523514 KRT28Q7Z3Y7 464 aa10.91□□□□□ -0.66
FAM49B-227ENST00000523514 NGDNQ8NEJ9 315 aaKnown RBP10.91□□□□□ -0.66
FAM49B-227ENST00000523514 PMFBP1Q8TBY8 1022 aa10.91□□□□□ -0.66
FAM49B-227ENST00000523514 FARP1Q9Y4F1 1045 aaPredicted RBP10.91□□□□□ -0.66
FAM49B-227ENST00000523514 PPIP5K1Q6PFW1 1433 aa10.91□□□□□ -0.66
FAM49B-227ENST00000523514 LRP6O75581 1613 aa10.91□□□□□ -0.66
FAM49B-227ENST00000523514 POLR3AO14802 1390 aaPredicted RBP10.9□□□□□ -0.66
FAM49B-227ENST00000523514 ARHGEF10O15013 1369 aa10.9□□□□□ -0.66
FAM49B-227ENST00000523514 ATAD2Q6PL18 1390 aa10.9□□□□□ -0.66
FAM49B-227ENST00000523514 USP47Q96K76 1375 aa10.9□□□□□ -0.66
FAM49B-227ENST00000523514 SPATA31A3Q5VYP0 1347 aa10.9□□□□□ -0.66
FAM49B-227ENST00000523514 PLEKHG3A1L390 1219 aa10.9□□□□□ -0.66
FAM49B-227ENST00000523514 ALS2Q96Q42 1657 aa10.89□□□□□ -0.67
FAM49B-227ENST00000523514 XPCQ01831 940 aaPredicted RBP10.89□□□□□ -0.67
FAM49B-227ENST00000523514 MEX3CQ5U5Q3 659 aaKnown RBP10.89□□□□□ -0.67
FAM49B-227ENST00000523514 CABP2Q9NPB3 220 aa10.89□□□□□ -0.67
FAM49B-227ENST00000523514 BRD4O60885 1362 aaPredicted RBP10.89□□□□□ -0.67
FAM49B-227ENST00000523514 DCAF8Q5TAQ9 597 aa10.88□□□□□ -0.67
FAM49B-227ENST00000523514 RNF25Q96BH1 459 aaPredicted RBP10.88□□□□□ -0.67
FAM49B-227ENST00000523514 MARF1Q9Y4F3 1742 aaKnown RBP10.88□□□□□ -0.67
FAM49B-227ENST00000523514 ACEP12821 1306 aa10.87□□□□□ -0.67
FAM49B-227ENST00000523514 ST20-MTHFSA0A0A6YYL1 179 aa10.87□□□□□ -0.67
FAM49B-227ENST00000523514 FAM212AQ96EL1 285 aa10.87□□□□□ -0.67
FAM49B-227ENST00000523514 PUS7Q96PZ0 661 aaKnown RBP10.87□□□□□ -0.67
FAM49B-227ENST00000523514 ABCA3Q99758 1704 aa10.87□□□□□ -0.67
FAM49B-227ENST00000523514 AKAP12Q02952 1782 aa10.86□□□□□ -0.67
FAM49B-227ENST00000523514 C19orf67A6NJJ6 358 aa10.86□□□□□ -0.67
FAM49B-227ENST00000523514 NUTM2BA6NNL0 878 aaPredicted RBP10.86□□□□□ -0.67
FAM49B-227ENST00000523514 NUTM2EB1AL46 878 aaPredicted RBP10.86□□□□□ -0.67
FAM49B-227ENST00000523514 NUTM2AQ8IVF1 878 aaPredicted RBP10.86□□□□□ -0.67
FAM49B-227ENST00000523514 NINLQ9Y2I6 1382 aa10.86□□□□□ -0.67
FAM49B-227ENST00000523514 TESK2Q96S53 571 aa10.85□□□□□ -0.67
FAM49B-227ENST00000523514 USP6P35125 1406 aa10.84□□□□□ -0.67
FAM49B-227ENST00000523514 PAK3O75914 559 aaPredicted RBP10.84□□□□□ -0.67
FAM49B-227ENST00000523514 TMF1P82094 1093 aa10.84□□□□□ -0.67
FAM49B-227ENST00000523514 CDCA8Q53HL2 280 aa10.84□□□□□ -0.67
FAM49B-227ENST00000523514 ZNF772Q68DY9 489 aaPredicted RBP10.84□□□□□ -0.67
FAM49B-227ENST00000523514 LMOD2Q6P5Q4 547 aa10.84□□□□□ -0.67
FAM49B-227ENST00000523514 CABP1Q9NZU7 370 aa10.84□□□□□ -0.67
FAM49B-227ENST00000523514 MON2Q7Z3U7 1717 aa10.84□□□□□ -0.67
FAM49B-227ENST00000523514 CRYBG1Q9Y4K1 1723 aa10.84□□□□□ -0.67
FAM49B-227ENST00000523514 VSIG10Q8N0Z9 540 aa10.83□□□□□ -0.68
FAM49B-227ENST00000523514 NRKQ7Z2Y5 1582 aa10.82□□□□□ -0.68
FAM49B-227ENST00000523514 ADAMTS2O95450 1211 aa10.82□□□□□ -0.68
FAM49B-227ENST00000523514 EIF4G2P78344 907 aaKnown RBP eCLIP10.82□□□□□ -0.686e-11■■■■■ 31.8
FAM49B-227ENST00000523514 C8orf37Q96NL8 207 aa10.82□□□□□ -0.68
FAM49B-227ENST00000523514 PHRF1Q9P1Y6 1649 aaKnown RBP10.82□□□□□ -0.68
FAM49B-227ENST00000523514 CPSF1Q10570 1443 aaKnown RBP10.82□□□□□ -0.68
FAM49B-227ENST00000523514 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.81□□□□□ -0.68
FAM49B-227ENST00000523514 HDGFL2Q7Z4V5 671 aaPredicted RBP10.81□□□□□ -0.68
FAM49B-227ENST00000523514 NGLY1Q96IV0 654 aa10.81□□□□□ -0.68
FAM49B-227ENST00000523514 AFF2P51816 1311 aa10.81□□□□□ -0.68
FAM49B-227ENST00000523514 TTC21AQ8NDW8 1320 aa10.81□□□□□ -0.68
FAM49B-227ENST00000523514 NWD2Q9ULI1 1742 aa10.81□□□□□ -0.68
FAM49B-227ENST00000523514 KTN1Q86UP2 1357 aaKnown RBP10.8□□□□□ -0.68
FAM49B-227ENST00000523514 ABTB2Q8N961 1025 aa10.8□□□□□ -0.68
FAM49B-227ENST00000523514 TMC1Q8TDI8 760 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms