RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 DCTN1Q14203 1278 aa16.1■□□□□ 0.17
PCDHGB1-201ENST00000523390 FBLN1P23142 703 aa16.1■□□□□ 0.17
PCDHGB1-201ENST00000523390 DNTTIP2Q5QJE6 756 aaKnown RBP16.09■□□□□ 0.17
PCDHGB1-201ENST00000523390 FOXO3O43524 673 aa16.09■□□□□ 0.17
PCDHGB1-201ENST00000523390 TATP17735 454 aaPredicted RBP16.09■□□□□ 0.17
PCDHGB1-201ENST00000523390 TESK2Q96S53 571 aa16.08■□□□□ 0.17
PCDHGB1-201ENST00000523390 ZNF428Q96B54 188 aa16.08■□□□□ 0.16
PCDHGB1-201ENST00000523390 ANO2Q9NQ90 1003 aa16.08■□□□□ 0.16
PCDHGB1-201ENST00000523390 TOMM22Q9NS69 142 aa16.08■□□□□ 0.16
PCDHGB1-201ENST00000523390 TNRQ92752 1358 aa16.08■□□□□ 0.16
PCDHGB1-201ENST00000523390 REC8O95072 547 aa16.07■□□□□ 0.16
PCDHGB1-201ENST00000523390 PRDM11Q9NQV5 511 aa16.07■□□□□ 0.16
PCDHGB1-201ENST00000523390 MIS18AQ9NYP9 233 aa16.07■□□□□ 0.16
PCDHGB1-201ENST00000523390 TULP1O00294 542 aaPredicted RBP16.07■□□□□ 0.16
PCDHGB1-201ENST00000523390 MCM10Q7L590 875 aa16.07■□□□□ 0.16
PCDHGB1-201ENST00000523390 GNAI3P08754 354 aa16.07■□□□□ 0.16
PCDHGB1-201ENST00000523390 L1TD1Q5T7N2 865 aaKnown RBP16.07■□□□□ 0.16
PCDHGB1-201ENST00000523390 C20orf194Q5TEA3 1177 aa16.07■□□□□ 0.16
PCDHGB1-201ENST00000523390 AMER1Q5JTC6 1135 aaPredicted RBP16.06■□□□□ 0.16
PCDHGB1-201ENST00000523390 PHF8Q9UPP1 1060 aa16.06■□□□□ 0.16
PCDHGB1-201ENST00000523390 CT47B1P0C2W7 299 aaPredicted RBP16.06■□□□□ 0.16
PCDHGB1-201ENST00000523390 TOM1L2Q6ZVM7 507 aa16.06■□□□□ 0.16
PCDHGB1-201ENST00000523390 MVPQ14764 893 aaKnown RBP16.06■□□□□ 0.16
PCDHGB1-201ENST00000523390 SURF6O75683 361 aaKnown RBP16.05■□□□□ 0.16
PCDHGB1-201ENST00000523390 FOXD4L6Q3SYB3 417 aaPredicted RBP16.05■□□□□ 0.16
PCDHGB1-201ENST00000523390 FOXD4L3Q6VB84 417 aaPredicted RBP16.05■□□□□ 0.16
PCDHGB1-201ENST00000523390 DDX54Q8TDD1 881 aaKnown RBP16.04■□□□□ 0.16
PCDHGB1-201ENST00000523390 C22orf23Q9BZE7 217 aa16.04■□□□□ 0.16
PCDHGB1-201ENST00000523390 USHBP1Q8N6Y0 703 aa16.04■□□□□ 0.16
PCDHGB1-201ENST00000523390 TEX14Q8IWB6 1497 aa16.03■□□□□ 0.16
PCDHGB1-201ENST00000523390 HSP90AB4PQ58FF6 505 aa16.03■□□□□ 0.16
PCDHGB1-201ENST00000523390 IL27Q8NEV9 243 aa16.03■□□□□ 0.16
PCDHGB1-201ENST00000523390 RUFY2Q8WXA3 655 aa16.03■□□□□ 0.16
PCDHGB1-201ENST00000523390 UHRF1BP1LA0JNW5 1464 aa16.02■□□□□ 0.16
PCDHGB1-201ENST00000523390 SSH1Q8WYL5 1049 aa16.02■□□□□ 0.16
PCDHGB1-201ENST00000523390 TMX4Q9H1E5 349 aaPredicted RBP16.02■□□□□ 0.16
PCDHGB1-201ENST00000523390 INTS3Q68E01 1043 aaKnown RBP16.02■□□□□ 0.15
PCDHGB1-201ENST00000523390 ADGRL2O95490 1459 aa16.02■□□□□ 0.15
PCDHGB1-201ENST00000523390 RARSP54136 660 aaKnown RBP16.01■□□□□ 0.15
PCDHGB1-201ENST00000523390 RBM42Q9BTD8 480 aaKnown RBP16.01■□□□□ 0.15
PCDHGB1-201ENST00000523390 ACEP12821 1306 aa16.01■□□□□ 0.15
PCDHGB1-201ENST00000523390 TMEM57Q8N5G2 664 aa16.01■□□□□ 0.15
PCDHGB1-201ENST00000523390 NEUROD6Q96NK8 337 aa16.01■□□□□ 0.15
PCDHGB1-201ENST00000523390 MEX3CQ5U5Q3 659 aaKnown RBP16.01■□□□□ 0.15
PCDHGB1-201ENST00000523390 DUSP27Q5VZP5 1158 aa16.01■□□□□ 0.15
PCDHGB1-201ENST00000523390 FYB1O15117 783 aa16.01■□□□□ 0.15
PCDHGB1-201ENST00000523390 GNAI2P04899 355 aa16.01■□□□□ 0.15
PCDHGB1-201ENST00000523390 SKAP1Q86WV1 359 aa16.01■□□□□ 0.15
PCDHGB1-201ENST00000523390 PTMSP20962 102 aa16■□□□□ 0.15
PCDHGB1-201ENST00000523390 KCNH5Q8NCM2 988 aa16■□□□□ 0.15
PCDHGB1-201ENST00000523390 ANO8Q9HCE9 1232 aaPredicted RBP16■□□□□ 0.15
PCDHGB1-201ENST00000523390 CDK11BP21127 795 aaKnown RBP16■□□□□ 0.15
PCDHGB1-201ENST00000523390 CDC45O75419 566 aa15.99■□□□□ 0.15
PCDHGB1-201ENST00000523390 ZKSCAN1P17029 563 aaPredicted RBP15.99■□□□□ 0.15
PCDHGB1-201ENST00000523390 CABP4P57796 275 aa15.99■□□□□ 0.15
PCDHGB1-201ENST00000523390 CLASRPQ8N2M8 674 aaKnown RBP15.99■□□□□ 0.15
PCDHGB1-201ENST00000523390 RIMS2Q9UQ26 1411 aa15.99■□□□□ 0.15
PCDHGB1-201ENST00000523390 G3V3G9 751 aa15.99■□□□□ 0.15
PCDHGB1-201ENST00000523390 DCAF8Q5TAQ9 597 aa15.99■□□□□ 0.15
PCDHGB1-201ENST00000523390 NUTM2BA6NNL0 878 aaPredicted RBP15.98■□□□□ 0.15
PCDHGB1-201ENST00000523390 FAM177BA6PVY3 158 aa15.98■□□□□ 0.15
PCDHGB1-201ENST00000523390 GNAT3A8MTJ3 354 aa15.98■□□□□ 0.15
PCDHGB1-201ENST00000523390 NUTM2EB1AL46 878 aaPredicted RBP15.98■□□□□ 0.15
PCDHGB1-201ENST00000523390 NUTM2AQ8IVF1 878 aaPredicted RBP15.98■□□□□ 0.15
PCDHGB1-201ENST00000523390 SRCIN1Q9C0H9 1055 aa15.98■□□□□ 0.15
PCDHGB1-201ENST00000523390 SPG7Q9UQ90 795 aa15.98■□□□□ 0.15
PCDHGB1-201ENST00000523390 NINLQ9Y2I6 1382 aa15.98■□□□□ 0.15
PCDHGB1-201ENST00000523390 ERC2O15083 957 aa15.97■□□□□ 0.15
PCDHGB1-201ENST00000523390 MYL6BP14649 208 aa15.97■□□□□ 0.15
PCDHGB1-201ENST00000523390 GCC1Q96CN9 775 aa15.97■□□□□ 0.15
PCDHGB1-201ENST00000523390 NSD2O96028 1365 aa15.97■□□□□ 0.15
PCDHGB1-201ENST00000523390 CCT4P50991 539 aaKnown RBP15.97■□□□□ 0.15
PCDHGB1-201ENST00000523390 BTBD11A6QL63 1104 aa15.97■□□□□ 0.15
PCDHGB1-201ENST00000523390 HTATSF1O43719 755 aaKnown RBP15.97■□□□□ 0.15
PCDHGB1-201ENST00000523390 AEBP2Q6ZN18 517 aaPredicted RBP15.96■□□□□ 0.15
PCDHGB1-201ENST00000523390 NAP1L5Q96NT1 182 aaPredicted RBP15.96■□□□□ 0.15
PCDHGB1-201ENST00000523390 ARHGEF12Q9NZN5 1544 aa15.96■□□□□ 0.15
PCDHGB1-201ENST00000523390 GOLGA6L3A6NEY3 463 aa15.96■□□□□ 0.15
PCDHGB1-201ENST00000523390 SYAP1Q96A49 352 aaPredicted RBP15.96■□□□□ 0.15
PCDHGB1-201ENST00000523390 CARD14Q9BXL6 1004 aa15.96■□□□□ 0.15
PCDHGB1-201ENST00000523390 BACH2Q9BYV9 841 aa15.96■□□□□ 0.15
PCDHGB1-201ENST00000523390 ABCC11Q96J66 1382 aa15.96■□□□□ 0.15
PCDHGB1-201ENST00000523390 ATP7AQ04656 1500 aa15.96■□□□□ 0.14
PCDHGB1-201ENST00000523390 ZRANB1Q9UGI0 708 aa15.95■□□□□ 0.14
PCDHGB1-201ENST00000523390 ANKRD36BQ8N2N9 1353 aa15.95■□□□□ 0.14
PCDHGB1-201ENST00000523390 NKTRP30414 1462 aaKnown RBP15.95■□□□□ 0.14
PCDHGB1-201ENST00000523390 PARD3Q8TEW0 1356 aa15.95■□□□□ 0.14
PCDHGB1-201ENST00000523390 DRC7Q8IY82 874 aa15.95■□□□□ 0.14
PCDHGB1-201ENST00000523390 APPP05067 770 aa15.95■□□□□ 0.14
PCDHGB1-201ENST00000523390 FAM83GA6ND36 823 aa15.94■□□□□ 0.14
PCDHGB1-201ENST00000523390 IFT57Q9NWB7 429 aa15.94■□□□□ 0.14
PCDHGB1-201ENST00000523390 DDX49Q9Y6V7 483 aaKnown RBP15.94■□□□□ 0.14
PCDHGB1-201ENST00000523390 ASXL1Q8IXJ9 1541 aa15.94■□□□□ 0.14
PCDHGB1-201ENST00000523390 HSP90AB2PQ58FF8 381 aa15.94■□□□□ 0.14
PCDHGB1-201ENST00000523390 LRRFIP1Q32MZ4 808 aaKnown RBP15.94■□□□□ 0.14
PCDHGB1-201ENST00000523390 CFAP65Q6ZU64 1925 aaKnown RBP15.94■□□□□ 0.14
PCDHGB1-201ENST00000523390 PER1O15534 1290 aaPredicted RBP15.93■□□□□ 0.14
PCDHGB1-201ENST00000523390 DDX11L8A8MPP1 907 aa15.93■□□□□ 0.14
PCDHGB1-201ENST00000523390 GOLGA6L6A8MZA4 724 aa15.93■□□□□ 0.14
PCDHGB1-201ENST00000523390 FAM184AQ8NB25 1140 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms