RNA–Protein interactions for RNA: ENST00000522545.1

IKBKB-224, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 3

Gene IKBKB, Length 452 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-224ENST00000522545 CPSF1Q10570 1443 aaKnown RBP9.47□□□□□ -0.89
IKBKB-224ENST00000522545 AKAP12Q02952 1782 aa9.46□□□□□ -0.9
IKBKB-224ENST00000522545 UBAP1LF5GYI3 381 aa9.46□□□□□ -0.9
IKBKB-224ENST00000522545 PANK3Q9H999 370 aa9.46□□□□□ -0.9
IKBKB-224ENST00000522545 KNSTRNQ9Y448 316 aa9.46□□□□□ -0.9
IKBKB-224ENST00000522545 KTN1Q86UP2 1357 aaKnown RBP9.46□□□□□ -0.9
IKBKB-224ENST00000522545 EDC4Q6P2E9 1401 aaKnown RBP9.46□□□□□ -0.9
IKBKB-224ENST00000522545 MON2Q7Z3U7 1717 aa9.45□□□□□ -0.9
IKBKB-224ENST00000522545 DDX10Q13206 875 aaKnown RBP9.45□□□□□ -0.9
IKBKB-224ENST00000522545 CGNL1Q0VF96 1302 aa9.45□□□□□ -0.9
IKBKB-224ENST00000522545 TTC21AQ8NDW8 1320 aa9.45□□□□□ -0.9
IKBKB-224ENST00000522545 NSD2O96028 1365 aa9.45□□□□□ -0.9
IKBKB-224ENST00000522545 BRINP3Q76B58 766 aa9.44□□□□□ -0.9
IKBKB-224ENST00000522545 PMFBP1Q8TBY8 1022 aa9.44□□□□□ -0.9
IKBKB-224ENST00000522545 ORAI2Q96SN7 254 aa9.44□□□□□ -0.9
IKBKB-224ENST00000522545 ATF5Q9Y2D1 282 aaPredicted RBP9.44□□□□□ -0.9
IKBKB-224ENST00000522545 A0A1W2PP64 1363 aa9.44□□□□□ -0.9
IKBKB-224ENST00000522545 NPC1L1Q9UHC9 1359 aa9.44□□□□□ -0.9
IKBKB-224ENST00000522545 USP6P35125 1406 aa9.44□□□□□ -0.9
IKBKB-224ENST00000522545 ROBO1Q9Y6N7 1651 aa9.43□□□□□ -0.9
IKBKB-224ENST00000522545 CD163L1Q9NR16 1453 aa9.43□□□□□ -0.9
IKBKB-224ENST00000522545 SBNO1A3KN83 1393 aa9.43□□□□□ -0.9
IKBKB-224ENST00000522545 FOXO3O43524 673 aa9.43□□□□□ -0.9
IKBKB-224ENST00000522545 ATXN8OSP0DMR3 200 aa9.43□□□□□ -0.9
IKBKB-224ENST00000522545 KRT28Q7Z3Y7 464 aa9.43□□□□□ -0.9
IKBKB-224ENST00000522545 NHSL1Q5SYE7 1610 aa9.42□□□□□ -0.9
IKBKB-224ENST00000522545 PER1O15534 1290 aaPredicted RBP9.42□□□□□ -0.9
IKBKB-224ENST00000522545 ABCB7O75027 752 aa9.42□□□□□ -0.9
IKBKB-224ENST00000522545 AHDC1Q5TGY3 1603 aaPredicted RBP9.42□□□□□ -0.9
IKBKB-224ENST00000522545 NSD3Q9BZ95 1437 aa9.41□□□□□ -0.9
IKBKB-224ENST00000522545 ARHGEF10O15013 1369 aa9.41□□□□□ -0.9
IKBKB-224ENST00000522545 SOS2Q07890 1332 aaPredicted RBP9.41□□□□□ -0.9
IKBKB-224ENST00000522545 LRRC59Q96AG4 307 aaKnown RBP9.41□□□□□ -0.9
IKBKB-224ENST00000522545 NRKQ7Z2Y5 1582 aa9.41□□□□□ -0.9
IKBKB-224ENST00000522545 SSH2Q76I76 1423 aa9.4□□□□□ -0.9
IKBKB-224ENST00000522545 TTC21BQ7Z4L5 1316 aa9.4□□□□□ -0.9
IKBKB-224ENST00000522545 PAK3O75914 559 aaPredicted RBP9.4□□□□□ -0.9
IKBKB-224ENST00000522545 PIP4K2BP78356 416 aa9.4□□□□□ -0.9
IKBKB-224ENST00000522545 NLRP13Q86W25 1043 aa9.4□□□□□ -0.9
IKBKB-224ENST00000522545 CARD14Q9BXL6 1004 aa9.4□□□□□ -0.9
IKBKB-224ENST00000522545 PXDNQ92626 1479 aa9.4□□□□□ -0.91
IKBKB-224ENST00000522545 RALBP1Q15311 655 aa9.39□□□□□ -0.91
IKBKB-224ENST00000522545 DIEXFQ68CQ4 756 aaKnown RBP9.39□□□□□ -0.91
IKBKB-224ENST00000522545 ABTB2Q8N961 1025 aa9.39□□□□□ -0.91
IKBKB-224ENST00000522545 COG3Q96JB2 828 aa9.39□□□□□ -0.91
IKBKB-224ENST00000522545 KIF20BQ96Q89 1820 aa9.39□□□□□ -0.91
IKBKB-224ENST00000522545 ANKRD26Q9UPS8 1709 aa9.39□□□□□ -0.91
IKBKB-224ENST00000522545 TNS3Q68CZ2 1445 aa9.39□□□□□ -0.91
IKBKB-224ENST00000522545 USP31Q70CQ4 1352 aa9.38□□□□□ -0.91
IKBKB-224ENST00000522545 SPATA31A3Q5VYP0 1347 aa9.38□□□□□ -0.91
IKBKB-224ENST00000522545 FYB1O15117 783 aa9.38□□□□□ -0.91
IKBKB-224ENST00000522545 ANP32CO43423 234 aa9.38□□□□□ -0.91
IKBKB-224ENST00000522545 AMER1Q5JTC6 1135 aaPredicted RBP9.38□□□□□ -0.91
IKBKB-224ENST00000522545 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.38□□□□□ -0.91
IKBKB-224ENST00000522545 KCNH5Q8NCM2 988 aa9.38□□□□□ -0.91
IKBKB-224ENST00000522545 PHLPP1O60346 1717 aa9.38□□□□□ -0.91
IKBKB-224ENST00000522545 TRPM3Q9HCF6 1732 aaPredicted RBP9.38□□□□□ -0.91
IKBKB-224ENST00000522545 USP54Q70EL1 1684 aa9.38□□□□□ -0.91
IKBKB-224ENST00000522545 ALS2Q96Q42 1657 aa9.37□□□□□ -0.91
IKBKB-224ENST00000522545 NLRP6P59044 892 aa9.36□□□□□ -0.91
IKBKB-224ENST00000522545 MORC1Q86VD1 984 aa9.36□□□□□ -0.91
IKBKB-224ENST00000522545 FBXO41Q8TF61 875 aa9.36□□□□□ -0.91
IKBKB-224ENST00000522545 PIK3C2AO00443 1686 aa9.36□□□□□ -0.91
IKBKB-224ENST00000522545 LMOD2Q6P5Q4 547 aa9.35□□□□□ -0.91
IKBKB-224ENST00000522545 KIF24Q5T7B8 1368 aa9.35□□□□□ -0.91
IKBKB-224ENST00000522545 COL16A1Q07092 1604 aaPredicted RBP9.34□□□□□ -0.91
IKBKB-224ENST00000522545 MED1Q15648 1581 aaPredicted RBP9.34□□□□□ -0.91
IKBKB-224ENST00000522545 OVOS2A0A0J9YW53 1432 aa9.34□□□□□ -0.91
IKBKB-224ENST00000522545 OVOS2Q6IE36 1432 aa9.34□□□□□ -0.91
IKBKB-224ENST00000522545 XPCQ01831 940 aaPredicted RBP9.34□□□□□ -0.91
IKBKB-224ENST00000522545 POLA2Q14181 598 aa9.34□□□□□ -0.91
IKBKB-224ENST00000522545 NME9Q86XW9 330 aa9.34□□□□□ -0.91
IKBKB-224ENST00000522545 PRKRIP1Q9H875 184 aaPredicted RBP9.34□□□□□ -0.91
IKBKB-224ENST00000522545 AATKQ6ZMQ8 1374 aa9.34□□□□□ -0.91
IKBKB-224ENST00000522545 PARD3Q8TEW0 1356 aa9.34□□□□□ -0.91
IKBKB-224ENST00000522545 COL22A1Q8NFW1 1626 aaPredicted RBP9.34□□□□□ -0.91
IKBKB-224ENST00000522545 SHPRHQ149N8 1683 aa9.33□□□□□ -0.92
IKBKB-224ENST00000522545 HAP1P54257 671 aaPredicted RBP9.33□□□□□ -0.92
IKBKB-224ENST00000522545 CC2D1BQ5T0F9 858 aaKnown RBP9.33□□□□□ -0.92
IKBKB-224ENST00000522545 DDX17Q92841 729 aaKnown RBP9.33□□□□□ -0.92
IKBKB-224ENST00000522545 GGNBP2Q9H3C7 697 aa9.33□□□□□ -0.92
IKBKB-224ENST00000522545 JCADQ9P266 1359 aa9.33□□□□□ -0.92
IKBKB-224ENST00000522545 USP19O94966 1318 aa9.32□□□□□ -0.92
IKBKB-224ENST00000522545 SPATA31A6Q5VVP1 1343 aa9.32□□□□□ -0.92
IKBKB-224ENST00000522545 GCP02774 474 aa9.32□□□□□ -0.92
IKBKB-224ENST00000522545 MYBBP1AQ9BQG0 1328 aaKnown RBP9.31□□□□□ -0.92
IKBKB-224ENST00000522545 SLIT3O75094 1523 aa9.31□□□□□ -0.92
IKBKB-224ENST00000522545 CFAP53Q96M91 514 aa9.31□□□□□ -0.92
IKBKB-224ENST00000522545 ABCC6O95255 1503 aa9.31□□□□□ -0.92
IKBKB-224ENST00000522545 RTL1A6NKG5 1358 aa9.3□□□□□ -0.92
IKBKB-224ENST00000522545 CPDO75976 1380 aa9.3□□□□□ -0.92
IKBKB-224ENST00000522545 PNPLA6Q8IY17 1366 aa9.3□□□□□ -0.92
IKBKB-224ENST00000522545 PHRF1Q9P1Y6 1649 aaKnown RBP9.3□□□□□ -0.92
IKBKB-224ENST00000522545 MAP2P11137 1827 aaKnown RBP9.29□□□□□ -0.92
IKBKB-224ENST00000522545 MARF1Q9Y4F3 1742 aaKnown RBP9.29□□□□□ -0.92
IKBKB-224ENST00000522545 CRYBG1Q9Y4K1 1723 aa9.29□□□□□ -0.92
IKBKB-224ENST00000522545 CCER2I3L3R5 266 aa9.29□□□□□ -0.92
IKBKB-224ENST00000522545 HSPA1LP34931 641 aa9.29□□□□□ -0.92
IKBKB-224ENST00000522545 NUTM2GQ5VZR2 741 aa9.29□□□□□ -0.92
IKBKB-224ENST00000522545 NFAT5O94916 1531 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms