RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 PRDM15P57071 1507 aaPredicted RBP12.51□□□□□ -0.41
PVT1-213ENST00000522414 DEPDC5O75140 1603 aa12.51□□□□□ -0.41
PVT1-213ENST00000522414 PPP1R3GB7ZBB8 358 aa12.5□□□□□ -0.41
PVT1-213ENST00000522414 MFSD10Q14728 455 aa12.5□□□□□ -0.41
PVT1-213ENST00000522414 RABGEF1Q9UJ41 708 aa12.5□□□□□ -0.41
PVT1-213ENST00000522414 DUOX2Q9NRD8 1548 aa12.5□□□□□ -0.41
PVT1-213ENST00000522414 SPATA31D1Q6ZQQ2 1576 aa12.5□□□□□ -0.41
PVT1-213ENST00000522414 PTPN23Q9H3S7 1636 aa12.5□□□□□ -0.41
PVT1-213ENST00000522414 POLR1AO95602 1720 aaPredicted RBP12.49□□□□□ -0.41
PVT1-213ENST00000522414 NEURL4Q96JN8 1562 aa12.49□□□□□ -0.41
PVT1-213ENST00000522414 ABCC5O15440 1437 aa12.49□□□□□ -0.41
PVT1-213ENST00000522414 DISP3Q9P2K9 1392 aa12.49□□□□□ -0.41
PVT1-213ENST00000522414 NLRP1Q9C000 1473 aa12.48□□□□□ -0.41
PVT1-213ENST00000522414 ITGBL1O95965 494 aaPredicted RBP12.48□□□□□ -0.41
PVT1-213ENST00000522414 BCAMP50895 628 aa12.48□□□□□ -0.41
PVT1-213ENST00000522414 ILDR2Q71H61 639 aa12.48□□□□□ -0.41
PVT1-213ENST00000522414 FGD6Q6ZV73 1430 aa12.47□□□□□ -0.41
PVT1-213ENST00000522414 ERBINQ96RT1 1412 aa12.47□□□□□ -0.41
PVT1-213ENST00000522414 CFAP65Q6ZU64 1925 aaKnown RBP12.47□□□□□ -0.41
PVT1-213ENST00000522414 KIF15Q9NS87 1388 aa12.46□□□□□ -0.41
PVT1-213ENST00000522414 PIP4K2BP78356 416 aa12.46□□□□□ -0.41
PVT1-213ENST00000522414 VWDEQ8N2E2 1590 aa12.46□□□□□ -0.42
PVT1-213ENST00000522414 FAM50AQ14320 339 aaKnown RBP12.45□□□□□ -0.42
PVT1-213ENST00000522414 ANKK1Q8NFD2 765 aa12.45□□□□□ -0.42
PVT1-213ENST00000522414 CEP152O94986 1710 aa12.45□□□□□ -0.42
PVT1-213ENST00000522414 DAPK1P53355 1430 aa12.45□□□□□ -0.42
PVT1-213ENST00000522414 ARHGAP31Q2M1Z3 1444 aa12.45□□□□□ -0.42
PVT1-213ENST00000522414 MED14O60244 1454 aa12.44□□□□□ -0.42
PVT1-213ENST00000522414 ADGRL2O95490 1459 aa12.44□□□□□ -0.42
PVT1-213ENST00000522414 ERVK-7P63135 1459 aa12.44□□□□□ -0.42
PVT1-213ENST00000522414 UGGT1Q9NYU2 1555 aa12.43□□□□□ -0.42
PVT1-213ENST00000522414 LMTK2Q8IWU2 1503 aa12.43□□□□□ -0.42
PVT1-213ENST00000522414 LTKP29376 864 aa12.43□□□□□ -0.42
PVT1-213ENST00000522414 TXNDC2Q86VQ3 553 aa12.43□□□□□ -0.42
PVT1-213ENST00000522414 SOWAHBA6NEL2 793 aa12.42□□□□□ -0.42
PVT1-213ENST00000522414 NPHP4O75161 1426 aaPredicted RBP12.42□□□□□ -0.42
PVT1-213ENST00000522414 TOM1O60784 492 aa12.41□□□□□ -0.42
PVT1-213ENST00000522414 HSPA1LP34931 641 aa12.41□□□□□ -0.42
PVT1-213ENST00000522414 TYW1BQ6NUM6 668 aa12.41□□□□□ -0.42
PVT1-213ENST00000522414 PPARGC1BQ86YN6 1023 aaKnown RBP12.41□□□□□ -0.42
PVT1-213ENST00000522414 KIAA1468Q9P260 1216 aa12.41□□□□□ -0.42
PVT1-213ENST00000522414 KDM5AP29375 1690 aaKnown RBP12.41□□□□□ -0.42
PVT1-213ENST00000522414 UBR1Q8IWV7 1749 aa12.4□□□□□ -0.42
PVT1-213ENST00000522414 PHF14O94880 888 aa12.4□□□□□ -0.42
PVT1-213ENST00000522414 IDI1Q13907 227 aa12.4□□□□□ -0.42
PVT1-213ENST00000522414 CADPS2Q86UW7 1296 aa12.4□□□□□ -0.42
PVT1-213ENST00000522414 ANKRD30AQ9BXX3 1397 aa12.4□□□□□ -0.42
PVT1-213ENST00000522414 LAPTM4BQ86VI4 370 aa12.39□□□□□ -0.43
PVT1-213ENST00000522414 FBXW7Q969H0 707 aa12.39□□□□□ -0.43
PVT1-213ENST00000522414 ZFRQ96KR1 1074 aaKnown RBP12.39□□□□□ -0.43
PVT1-213ENST00000522414 WBP1LQ9NX94 342 aa12.39□□□□□ -0.43
PVT1-213ENST00000522414 ARHGAP23Q9P227 1491 aa12.38□□□□□ -0.43
PVT1-213ENST00000522414 SLIT1O75093 1534 aa12.37□□□□□ -0.43
PVT1-213ENST00000522414 CPS1P31327 1500 aa12.37□□□□□ -0.43
PVT1-213ENST00000522414 SEPT9Q9UHD8 586 aaPredicted RBP12.37□□□□□ -0.43
PVT1-213ENST00000522414 EID1Q9Y6B2 187 aa12.37□□□□□ -0.43
PVT1-213ENST00000522414 KANK1Q14678 1352 aa12.37□□□□□ -0.43
PVT1-213ENST00000522414 IQGAP1P46940 1657 aa12.37□□□□□ -0.43
PVT1-213ENST00000522414 EFCAB6Q5THR3 1501 aa12.37□□□□□ -0.43
PVT1-213ENST00000522414 SOCS7O14512 581 aa12.34□□□□□ -0.43
PVT1-213ENST00000522414 ITGAEP38570 1179 aa12.34□□□□□ -0.43
PVT1-213ENST00000522414 C6orf132Q5T0Z8 1188 aa12.34□□□□□ -0.43
PVT1-213ENST00000522414 SLC26A8Q96RN1 970 aa12.34□□□□□ -0.43
PVT1-213ENST00000522414 SYNMO15061 1565 aa12.34□□□□□ -0.43
PVT1-213ENST00000522414 RBM33Q96EV2 1170 aaKnown RBP12.33□□□□□ -0.44
PVT1-213ENST00000522414 NOS1P29475 1434 aa12.33□□□□□ -0.44
PVT1-213ENST00000522414 UNC13BO14795 1591 aa12.33□□□□□ -0.44
PVT1-213ENST00000522414 SCAF11Q99590 1463 aaKnown RBP12.33□□□□□ -0.44
PVT1-213ENST00000522414 PIK3C2BO00750 1634 aa12.33□□□□□ -0.44
PVT1-213ENST00000522414 STRCP1A6NGW2 1772 aa12.33□□□□□ -0.44
PVT1-213ENST00000522414 TMEM2Q9UHN6 1383 aa12.32□□□□□ -0.44
PVT1-213ENST00000522414 ONECUT3O60422 494 aaPredicted RBP12.32□□□□□ -0.44
PVT1-213ENST00000522414 ALKQ9UM73 1620 aa12.32□□□□□ -0.44
PVT1-213ENST00000522414 RPRD2Q5VT52 1461 aaKnown RBP12.32□□□□□ -0.44
PVT1-213ENST00000522414 LRRC7Q96NW7 1537 aa12.32□□□□□ -0.44
PVT1-213ENST00000522414 KCNC4Q03721 635 aa12.31□□□□□ -0.44
PVT1-213ENST00000522414 Q6ZNB5 142 aa12.31□□□□□ -0.44
PVT1-213ENST00000522414 NYAP1Q6ZVC0 841 aa12.31□□□□□ -0.44
PVT1-213ENST00000522414 BCANQ96GW7 911 aa12.31□□□□□ -0.44
PVT1-213ENST00000522414 ANKRD50Q9ULJ7 1429 aa12.3□□□□□ -0.44
PVT1-213ENST00000522414 TET3O43151 1660 aa12.3□□□□□ -0.44
PVT1-213ENST00000522414 TRIM6-TRIM34B2RNG4 842 aa12.3□□□□□ -0.44
PVT1-213ENST00000522414 SLC52A1Q9NWF4 448 aa12.3□□□□□ -0.44
PVT1-213ENST00000522414 ROCK1Q13464 1354 aa12.3□□□□□ -0.44
PVT1-213ENST00000522414 GCC2Q8IWJ2 1684 aa12.29□□□□□ -0.44
PVT1-213ENST00000522414 CAMK2BQ13554 666 aa12.29□□□□□ -0.44
PVT1-213ENST00000522414 ADGRB3O60242 1522 aa12.28□□□□□ -0.44
PVT1-213ENST00000522414 DPYSL4O14531 572 aa12.28□□□□□ -0.44
PVT1-213ENST00000522414 KCNA6P17658 529 aa12.28□□□□□ -0.44
PVT1-213ENST00000522414 EPAS1Q99814 870 aa12.28□□□□□ -0.44
PVT1-213ENST00000522414 LCE2BO14633 110 aa12.27□□□□□ -0.45
PVT1-213ENST00000522414 FAM98CQ17RN3 349 aaKnown RBP12.27□□□□□ -0.45
PVT1-213ENST00000522414 NUTM2DQ5VT03 806 aaPredicted RBP12.27□□□□□ -0.45
PVT1-213ENST00000522414 PROSER2Q86WR7 435 aaPredicted RBP12.27□□□□□ -0.45
PVT1-213ENST00000522414 IQGAP3Q86VI3 1631 aa12.26□□□□□ -0.45
PVT1-213ENST00000522414 HPS5Q9UPZ3 1129 aa12.25□□□□□ -0.45
PVT1-213ENST00000522414 XIRP1Q702N8 1843 aaKnown RBP12.25□□□□□ -0.45
PVT1-213ENST00000522414 TMEM94Q12767 1356 aa12.24□□□□□ -0.45
PVT1-213ENST00000522414 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.24□□□□□ -0.45
PVT1-213ENST00000522414 TSR3Q9UJK0 312 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms