RNA–Protein interactions for RNA: ENST00000522411.5

LSS-211, Transcript of lanosterol synthase, humanhuman

TSL 2 BASIC

Gene LSS, Length 2,523 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-211ENST00000522411 TRIM27P14373 513 aa18.19■□□□□ 0.5
LSS-211ENST00000522411 MFAP1P55081 439 aaKnown RBP18.19■□□□□ 0.5
LSS-211ENST00000522411 CAMSAP1Q5T5Y3 1602 aa18.19■□□□□ 0.5
LSS-211ENST00000522411 IDI1Q13907 227 aa18.18■□□□□ 0.5
LSS-211ENST00000522411 FAM43AQ8N2R8 423 aa18.18■□□□□ 0.5
LSS-211ENST00000522411 SSH1Q8WYL5 1049 aa18.18■□□□□ 0.5
LSS-211ENST00000522411 ITPRIPQ8IWB1 547 aa18.18■□□□□ 0.5
LSS-211ENST00000522411 ARXQ96QS3 562 aa18.18■□□□□ 0.5
LSS-211ENST00000522411 C22orf23Q9BZE7 217 aa18.18■□□□□ 0.5
LSS-211ENST00000522411 ANKRD36BQ8N2N9 1353 aa18.18■□□□□ 0.5
LSS-211ENST00000522411 AGLP35573 1532 aa18.17■□□□□ 0.5
LSS-211ENST00000522411 GGNBP2Q9H3C7 697 aa18.17■□□□□ 0.5
LSS-211ENST00000522411 TRIM35Q9UPQ4 493 aa18.17■□□□□ 0.5
LSS-211ENST00000522411 TMPOP42166 694 aaKnown RBP18.16■□□□□ 0.5
LSS-211ENST00000522411 PLEKHF1Q96S99 279 aa18.16■□□□□ 0.5
LSS-211ENST00000522411 USP32Q8NFA0 1604 aa18.16■□□□□ 0.5
LSS-211ENST00000522411 CLTCQ00610 1675 aaKnown RBP18.16■□□□□ 0.5
LSS-211ENST00000522411 NCBP3Q53F19 620 aaKnown RBP18.16■□□□□ 0.5
LSS-211ENST00000522411 NOB1Q9ULX3 412 aaKnown RBP18.16■□□□□ 0.5
LSS-211ENST00000522411 REREQ9P2R6 1566 aa18.16■□□□□ 0.5
LSS-211ENST00000522411 ARHGEF28Q8N1W1 1705 aaKnown RBP18.16■□□□□ 0.5
LSS-211ENST00000522411 RPGRIP1LQ68CZ1 1315 aa18.15■□□□□ 0.5
LSS-211ENST00000522411 PIK3C2BO00750 1634 aa18.15■□□□□ 0.5
LSS-211ENST00000522411 TULP4Q9NRJ4 1543 aa18.14■□□□□ 0.5
LSS-211ENST00000522411 ATF7IPQ6VMQ6 1270 aa18.14■□□□□ 0.49
LSS-211ENST00000522411 CT47B1P0C2W7 299 aaPredicted RBP18.14■□□□□ 0.49
LSS-211ENST00000522411 HDAC1Q13547 482 aaPredicted RBP18.14■□□□□ 0.49
LSS-211ENST00000522411 GZF1Q9H116 711 aaPredicted RBP18.14■□□□□ 0.49
LSS-211ENST00000522411 STK26Q9P289 416 aa18.14■□□□□ 0.49
LSS-211ENST00000522411 DDX19BQ9UMR2 479 aa18.14■□□□□ 0.49
LSS-211ENST00000522411 NSD2O96028 1365 aa18.13■□□□□ 0.49
LSS-211ENST00000522411 EIF5BO60841 1220 aaKnown RBP18.13■□□□□ 0.49
LSS-211ENST00000522411 NEXMIFQ5QGS0 1516 aa18.13■□□□□ 0.49
LSS-211ENST00000522411 MCM4P33991 863 aa18.13■□□□□ 0.49
LSS-211ENST00000522411 L1TD1Q5T7N2 865 aaKnown RBP18.13■□□□□ 0.49
LSS-211ENST00000522411 TMEM57Q8N5G2 664 aa18.13■□□□□ 0.49
LSS-211ENST00000522411 PUS7Q96PZ0 661 aaKnown RBP18.13■□□□□ 0.49
LSS-211ENST00000522411 ADGRB2O60241 1585 aa18.12■□□□□ 0.49
LSS-211ENST00000522411 SRPK2P78362 688 aaKnown RBP18.12■□□□□ 0.49
LSS-211ENST00000522411 VGFO15240 615 aaPredicted RBP18.11■□□□□ 0.49
LSS-211ENST00000522411 A0A1W2PP64 1363 aa18.11■□□□□ 0.49
LSS-211ENST00000522411 RIPK4P57078 832 aa18.11■□□□□ 0.49
LSS-211ENST00000522411 SMC5Q8IY18 1101 aa18.1■□□□□ 0.49
LSS-211ENST00000522411 PPP6R1Q9UPN7 881 aa18.1■□□□□ 0.49
LSS-211ENST00000522411 RRAGDQ9NQL2 400 aaPredicted RBP18.09■□□□□ 0.49
LSS-211ENST00000522411 CHMP5Q9NZZ3 219 aa18.09■□□□□ 0.49
LSS-211ENST00000522411 XRCC6P12956 609 aaKnown RBP eCLIP18.09■□□□□ 0.492e-6■■■■■ 29.9
LSS-211ENST00000522411 ZBTB40Q9NUA8 1239 aa18.09■□□□□ 0.49
LSS-211ENST00000522411 ARHGAP31Q2M1Z3 1444 aa18.09■□□□□ 0.49
LSS-211ENST00000522411 FYB1O15117 783 aa18.08■□□□□ 0.49
LSS-211ENST00000522411 STAG3Q9UJ98 1225 aa18.08■□□□□ 0.48
LSS-211ENST00000522411 ABCC11Q96J66 1382 aa18.07■□□□□ 0.48
LSS-211ENST00000522411 MYO5BQ9ULV0 1848 aa18.07■□□□□ 0.48
LSS-211ENST00000522411 GOLGA6L3A6NEY3 463 aa18.07■□□□□ 0.48
LSS-211ENST00000522411 LNPKQ9C0E8 428 aa18.06■□□□□ 0.48
LSS-211ENST00000522411 TRAK2O60296 914 aa18.06■□□□□ 0.48
LSS-211ENST00000522411 HSCBQ8IWL3 235 aa18.05■□□□□ 0.48
LSS-211ENST00000522411 PANK2Q9BZ23 570 aa18.05■□□□□ 0.48
LSS-211ENST00000522411 MINK1Q8N4C8 1332 aaPredicted RBP18.05■□□□□ 0.48
LSS-211ENST00000522411 PREX1Q8TCU6 1659 aa18.05■□□□□ 0.48
LSS-211ENST00000522411 FSD2A1L4K1 749 aa18.05■□□□□ 0.48
LSS-211ENST00000522411 COL3A1P02461 1466 aaPredicted RBP18.04■□□□□ 0.48
LSS-211ENST00000522411 SLC52A1Q9NWF4 448 aa18.04■□□□□ 0.48
LSS-211ENST00000522411 IL16Q14005 1332 aa18.04■□□□□ 0.48
LSS-211ENST00000522411 DIAPH1O60610 1272 aaKnown RBP18.04■□□□□ 0.48
LSS-211ENST00000522411 NUCB1Q02818 461 aa18.04■□□□□ 0.48
LSS-211ENST00000522411 IPO8O15397 1037 aaKnown RBP18.03■□□□□ 0.48
LSS-211ENST00000522411 ZNF692Q9BU19 519 aaPredicted RBP18.03■□□□□ 0.48
LSS-211ENST00000522411 RSPH6AQ9H0K4 717 aa18.03■□□□□ 0.48
LSS-211ENST00000522411 FBLN1P23142 703 aa18.03■□□□□ 0.48
LSS-211ENST00000522411 KIF16BQ96L93 1317 aa18.02■□□□□ 0.47
LSS-211ENST00000522411 TERF2IPQ9NYB0 399 aa18.02■□□□□ 0.47
LSS-211ENST00000522411 CHD1LQ86WJ1 897 aa18.01■□□□□ 0.47
LSS-211ENST00000522411 PRAM1Q96QH2 718 aa18.01■□□□□ 0.47
LSS-211ENST00000522411 RBM25P49756 843 aaKnown RBP18■□□□□ 0.47
LSS-211ENST00000522411 TMEM131LA2VDJ0 1609 aa17.99■□□□□ 0.47
LSS-211ENST00000522411 ALDH1L2Q3SY69 923 aa17.99■□□□□ 0.47
LSS-211ENST00000522411 C1orf115Q9H7X2 142 aa17.99■□□□□ 0.47
LSS-211ENST00000522411 ZFYVE9O95405 1425 aa17.99■□□□□ 0.47
LSS-211ENST00000522411 ANKRD45Q5TZF3 282 aa17.98■□□□□ 0.47
LSS-211ENST00000522411 PRKAR2BP31323 418 aa17.98■□□□□ 0.47
LSS-211ENST00000522411 DDIT3P35638 169 aa17.98■□□□□ 0.47
LSS-211ENST00000522411 PTPRMP28827 1452 aa17.97■□□□□ 0.47
LSS-211ENST00000522411 CD163L1Q9NR16 1453 aa17.97■□□□□ 0.47
LSS-211ENST00000522411 THUMPD2Q9BTF0 503 aaKnown RBP17.97■□□□□ 0.47
LSS-211ENST00000522411 CABP1Q9NZU7 370 aa17.97■□□□□ 0.47
LSS-211ENST00000522411 PNNQ9H307 717 aaKnown RBP17.97■□□□□ 0.47
LSS-211ENST00000522411 ATAD2Q6PL18 1390 aa17.96■□□□□ 0.47
LSS-211ENST00000522411 TNRQ92752 1358 aa17.96■□□□□ 0.47
LSS-211ENST00000522411 ZBTB7BO15156 539 aaPredicted RBP17.96■□□□□ 0.47
LSS-211ENST00000522411 FCHSD2O94868 740 aa17.96■□□□□ 0.47
LSS-211ENST00000522411 SNX21Q969T3 373 aa17.96■□□□□ 0.47
LSS-211ENST00000522411 PNPLA6Q8IY17 1366 aa17.96■□□□□ 0.47
LSS-211ENST00000522411 ELL2O00472 640 aaPredicted RBP17.96■□□□□ 0.47
LSS-211ENST00000522411 HDGFL2Q7Z4V5 671 aaPredicted RBP17.96■□□□□ 0.47
LSS-211ENST00000522411 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.96■□□□□ 0.476e-8■□□□□ 9.7
LSS-211ENST00000522411 CDK19Q9BWU1 502 aa17.96■□□□□ 0.47
LSS-211ENST00000522411 TNPO1Q92973 898 aaKnown RBP17.95■□□□□ 0.46
LSS-211ENST00000522411 PHACTR3Q96KR7 559 aa17.95■□□□□ 0.46
LSS-211ENST00000522411 FER1L4A9Z1Z3 1794 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms