RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 CDC42BPGQ6DT37 1551 aa12.99□□□□□ -0.33
SHPRH-209ENST00000521977 NSD3Q9BZ95 1437 aa12.99□□□□□ -0.33
SHPRH-209ENST00000521977 A0A1W2PP64 1363 aa12.99□□□□□ -0.33
SHPRH-209ENST00000521977 PRR36Q9H6K5 1346 aa12.99□□□□□ -0.33
SHPRH-209ENST00000521977 NUDT16Q96DE0 195 aaKnown RBP12.99□□□□□ -0.33
SHPRH-209ENST00000521977 NALCNQ8IZF0 1738 aa12.99□□□□□ -0.33
SHPRH-209ENST00000521977 CPSF1Q10570 1443 aaKnown RBP12.98□□□□□ -0.33
SHPRH-209ENST00000521977 CABP1Q9NZU7 370 aa12.98□□□□□ -0.33
SHPRH-209ENST00000521977 CCDC61Q9Y6R9 512 aa12.98□□□□□ -0.33
SHPRH-209ENST00000521977 PPIP5K1Q6PFW1 1433 aa12.97□□□□□ -0.33
SHPRH-209ENST00000521977 ANKARQ7Z5J8 1434 aa12.97□□□□□ -0.33
SHPRH-209ENST00000521977 ADGRL3Q9HAR2 1447 aa12.97□□□□□ -0.33
SHPRH-209ENST00000521977 STRCP1A6NGW2 1772 aa12.97□□□□□ -0.33
SHPRH-209ENST00000521977 FMN2Q9NZ56 1722 aa12.97□□□□□ -0.33
SHPRH-209ENST00000521977 MYBBP1AQ9BQG0 1328 aaKnown RBP12.97□□□□□ -0.33
SHPRH-209ENST00000521977 CD44P16070 742 aaKnown RBP12.97□□□□□ -0.33
SHPRH-209ENST00000521977 CLCN6P51797 869 aa12.97□□□□□ -0.33
SHPRH-209ENST00000521977 TERF2IPQ9NYB0 399 aa12.97□□□□□ -0.33
SHPRH-209ENST00000521977 NCOA3Q9Y6Q9 1424 aa12.96□□□□□ -0.33
SHPRH-209ENST00000521977 PLEKHG3A1L390 1219 aa12.96□□□□□ -0.33
SHPRH-209ENST00000521977 GABBR2O75899 941 aa12.96□□□□□ -0.33
SHPRH-209ENST00000521977 CC2D1BQ5T0F9 858 aaKnown RBP12.96□□□□□ -0.33
SHPRH-209ENST00000521977 NSD2O96028 1365 aa12.95□□□□□ -0.34
SHPRH-209ENST00000521977 AKAP12Q02952 1782 aa12.95□□□□□ -0.34
SHPRH-209ENST00000521977 CCDC184Q52MB2 194 aa12.95□□□□□ -0.34
SHPRH-209ENST00000521977 HDGFL2Q7Z4V5 671 aaPredicted RBP12.95□□□□□ -0.34
SHPRH-209ENST00000521977 BRD4O60885 1362 aaPredicted RBP12.94□□□□□ -0.34
SHPRH-209ENST00000521977 CGNL1Q0VF96 1302 aa12.94□□□□□ -0.34
SHPRH-209ENST00000521977 ITSN1Q15811 1721 aa12.94□□□□□ -0.34
SHPRH-209ENST00000521977 MON2Q7Z3U7 1717 aa12.93□□□□□ -0.34
SHPRH-209ENST00000521977 NLRP13Q86W25 1043 aa12.93□□□□□ -0.34
SHPRH-209ENST00000521977 CNGB1Q14028 1251 aaPredicted RBP12.92□□□□□ -0.34
SHPRH-209ENST00000521977 EDC4Q6P2E9 1401 aaKnown RBP12.92□□□□□ -0.34
SHPRH-209ENST00000521977 PROSER2Q86WR7 435 aaPredicted RBP12.92□□□□□ -0.34
SHPRH-209ENST00000521977 POLR3AO14802 1390 aaPredicted RBP12.92□□□□□ -0.34
SHPRH-209ENST00000521977 RGPD8O14715 1765 aaPredicted RBP12.92□□□□□ -0.34
SHPRH-209ENST00000521977 ANKRD26Q9UPS8 1709 aa12.91□□□□□ -0.34
SHPRH-209ENST00000521977 MRS2Q9HD23 443 aa12.91□□□□□ -0.34
SHPRH-209ENST00000521977 NRKQ7Z2Y5 1582 aa12.9□□□□□ -0.34
SHPRH-209ENST00000521977 DCCP43146 1447 aa12.9□□□□□ -0.34
SHPRH-209ENST00000521977 PPP2R1AP30153 589 aa12.9□□□□□ -0.34
SHPRH-209ENST00000521977 RBM33Q96EV2 1170 aaKnown RBP12.9□□□□□ -0.34
SHPRH-209ENST00000521977 KIF20BQ96Q89 1820 aa12.9□□□□□ -0.34
SHPRH-209ENST00000521977 ACEP12821 1306 aa12.89□□□□□ -0.35
SHPRH-209ENST00000521977 SSH2Q76I76 1423 aa12.89□□□□□ -0.35
SHPRH-209ENST00000521977 NUTM2FA1L443 756 aa12.89□□□□□ -0.35
SHPRH-209ENST00000521977 FYB1O15117 783 aa12.89□□□□□ -0.35
SHPRH-209ENST00000521977 TMEM94Q12767 1356 aa12.89□□□□□ -0.35
SHPRH-209ENST00000521977 USP6P35125 1406 aa12.88□□□□□ -0.35
SHPRH-209ENST00000521977 XIRP1Q702N8 1843 aaKnown RBP12.88□□□□□ -0.35
SHPRH-209ENST00000521977 C19orf44Q9H6X5 657 aa12.88□□□□□ -0.35
SHPRH-209ENST00000521977 LRRC7Q96NW7 1537 aa12.88□□□□□ -0.35
SHPRH-209ENST00000521977 MORC1Q86VD1 984 aa12.87□□□□□ -0.35
SHPRH-209ENST00000521977 PNISRQ8TF01 805 aaKnown RBP12.87□□□□□ -0.35
SHPRH-209ENST00000521977 ZNF335Q9H4Z2 1342 aaPredicted RBP12.87□□□□□ -0.35
SHPRH-209ENST00000521977 C14orf37Q86TY3 774 aa12.85□□□□□ -0.35
SHPRH-209ENST00000521977 PMFBP1Q8TBY8 1022 aa12.85□□□□□ -0.35
SHPRH-209ENST00000521977 GGNBP2Q9H3C7 697 aa12.85□□□□□ -0.35
SHPRH-209ENST00000521977 TTC21BQ7Z4L5 1316 aa12.85□□□□□ -0.35
SHPRH-209ENST00000521977 C1orf167Q5SNV9 1468 aa12.85□□□□□ -0.35
SHPRH-209ENST00000521977 FKBP8Q14318 412 aa12.84□□□□□ -0.35
SHPRH-209ENST00000521977 ZNF579Q8NAF0 562 aaKnown RBP12.84□□□□□ -0.35
SHPRH-209ENST00000521977 YTHDC1Q96MU7 727 aaKnown RBP12.84□□□□□ -0.35
SHPRH-209ENST00000521977 PHF8Q9UPP1 1060 aa12.84□□□□□ -0.35
SHPRH-209ENST00000521977 MST1RQ04912 1400 aa12.84□□□□□ -0.35
SHPRH-209ENST00000521977 TTC21AQ8NDW8 1320 aa12.84□□□□□ -0.35
SHPRH-209ENST00000521977 INSRP06213 1382 aa12.83□□□□□ -0.36
SHPRH-209ENST00000521977 MNX1P50219 401 aaPredicted RBP12.83□□□□□ -0.36
SHPRH-209ENST00000521977 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.83□□□□□ -0.36
SHPRH-209ENST00000521977 NGDNQ8NEJ9 315 aaKnown RBP12.83□□□□□ -0.36
SHPRH-209ENST00000521977 OVOS2A0A0J9YW53 1432 aa12.82□□□□□ -0.36
SHPRH-209ENST00000521977 OVOS2Q6IE36 1432 aa12.82□□□□□ -0.36
SHPRH-209ENST00000521977 NME9Q86XW9 330 aa12.82□□□□□ -0.36
SHPRH-209ENST00000521977 FAM9BQ8IZU0 186 aa12.82□□□□□ -0.36
SHPRH-209ENST00000521977 KIF1AQ12756 1690 aa12.82□□□□□ -0.36
SHPRH-209ENST00000521977 MSH6P52701 1360 aa12.81□□□□□ -0.36
SHPRH-209ENST00000521977 USP31Q70CQ4 1352 aa12.81□□□□□ -0.36
SHPRH-209ENST00000521977 USP54Q70EL1 1684 aa12.81□□□□□ -0.36
SHPRH-209ENST00000521977 CADPS2Q86UW7 1296 aa12.81□□□□□ -0.36
SHPRH-209ENST00000521977 AATKQ6ZMQ8 1374 aa12.81□□□□□ -0.36
SHPRH-209ENST00000521977 ATF3P18847 181 aa12.8□□□□□ -0.36
SHPRH-209ENST00000521977 ESCO1Q5FWF5 840 aa12.8□□□□□ -0.36
SHPRH-209ENST00000521977 ORAI2Q96SN7 254 aa12.8□□□□□ -0.36
SHPRH-209ENST00000521977 ZRANB1Q9UGI0 708 aa12.8□□□□□ -0.36
SHPRH-209ENST00000521977 PIK3C2AO00443 1686 aa12.8□□□□□ -0.36
SHPRH-209ENST00000521977 SMG6Q86US8 1419 aaKnown RBP12.79□□□□□ -0.36
SHPRH-209ENST00000521977 COG3Q96JB2 828 aa12.79□□□□□ -0.36
SHPRH-209ENST00000521977 LTBP4Q8N2S1 1624 aa12.78□□□□□ -0.36
SHPRH-209ENST00000521977 TNNT2P45379 298 aaPredicted RBP12.78□□□□□ -0.36
SHPRH-209ENST00000521977 MTHFSP49914 203 aa12.78□□□□□ -0.36
SHPRH-209ENST00000521977 PNPLA6Q8IY17 1366 aa12.78□□□□□ -0.36
SHPRH-209ENST00000521977 SHPRHQ149N8 1683 aa12.77□□□□□ -0.36
SHPRH-209ENST00000521977 MARF1Q9Y4F3 1742 aaKnown RBP12.77□□□□□ -0.36
SHPRH-209ENST00000521977 PAK3O75914 559 aaPredicted RBP12.77□□□□□ -0.37
SHPRH-209ENST00000521977 CENPBP07199 599 aaPredicted RBP12.77□□□□□ -0.37
SHPRH-209ENST00000521977 BLMP54132 1417 aaPredicted RBP12.77□□□□□ -0.37
SHPRH-209ENST00000521977 COL3A1P02461 1466 aaPredicted RBP12.77□□□□□ -0.37
SHPRH-209ENST00000521977 TRPM3Q9HCF6 1732 aaPredicted RBP12.76□□□□□ -0.37
SHPRH-209ENST00000521977 POLKQ9UBT6 870 aa12.76□□□□□ -0.37
SHPRH-209ENST00000521977 MAP2P11137 1827 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms