RNA–Protein interactions for RNA: ENST00000521671.1

ATP6V1C1-206, Transcript of ATPase H+ transporting V1 subunit C1, humanhuman

TSL 3

Gene ATP6V1C1, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C1-206ENST00000521671 VARSP26640 1264 aaKnown RBP9.77□□□□□ -0.85
ATP6V1C1-206ENST00000521671 PRPF38BQ5VTL8 546 aaKnown RBP9.77□□□□□ -0.85
ATP6V1C1-206ENST00000521671 LYPD8Q6UX82 237 aa9.77□□□□□ -0.85
ATP6V1C1-206ENST00000521671 BMP1P13497 986 aa9.76□□□□□ -0.85
ATP6V1C1-206ENST00000521671 HRCP23327 699 aa9.76□□□□□ -0.85
ATP6V1C1-206ENST00000521671 RIC3Q7Z5B4 369 aa9.76□□□□□ -0.85
ATP6V1C1-206ENST00000521671 TERTO14746 1132 aaKnown RBP9.75□□□□□ -0.85
ATP6V1C1-206ENST00000521671 CSPP1Q1MSJ5 1256 aa9.74□□□□□ -0.85
ATP6V1C1-206ENST00000521671 MPNDQ8N594 471 aa9.74□□□□□ -0.85
ATP6V1C1-206ENST00000521671 F12P00748 615 aaPredicted RBP9.73□□□□□ -0.85
ATP6V1C1-206ENST00000521671 PDE4DQ08499 809 aa9.73□□□□□ -0.85
ATP6V1C1-206ENST00000521671 NNTQ13423 1086 aa9.73□□□□□ -0.85
ATP6V1C1-206ENST00000521671 TRIM46Q7Z4K8 759 aa9.73□□□□□ -0.85
ATP6V1C1-206ENST00000521671 FAM174AQ8TBP5 190 aa9.73□□□□□ -0.85
ATP6V1C1-206ENST00000521671 CABLES1Q8TDN4 633 aa9.73□□□□□ -0.85
ATP6V1C1-206ENST00000521671 MAP10Q9P2G4 905 aa9.73□□□□□ -0.85
ATP6V1C1-206ENST00000521671 WIPF1O43516 503 aa9.72□□□□□ -0.85
ATP6V1C1-206ENST00000521671 MYSM1Q5VVJ2 828 aa9.71□□□□□ -0.86
ATP6V1C1-206ENST00000521671 TSC1Q92574 1164 aa9.7□□□□□ -0.86
ATP6V1C1-206ENST00000521671 ADH1CP00326 375 aa9.69□□□□□ -0.86
ATP6V1C1-206ENST00000521671 INSM1Q01101 510 aaPredicted RBP9.69□□□□□ -0.86
ATP6V1C1-206ENST00000521671 TUSC1Q2TAM9 212 aa9.69□□□□□ -0.86
ATP6V1C1-206ENST00000521671 LIMD1Q9UGP4 676 aa9.69□□□□□ -0.86
ATP6V1C1-206ENST00000521671 NUTM2BA6NNL0 878 aaPredicted RBP9.68□□□□□ -0.86
ATP6V1C1-206ENST00000521671 NUTM2EB1AL46 878 aaPredicted RBP9.68□□□□□ -0.86
ATP6V1C1-206ENST00000521671 NUTM2DQ5VT03 806 aaPredicted RBP9.68□□□□□ -0.86
ATP6V1C1-206ENST00000521671 NUTM2AQ8IVF1 878 aaPredicted RBP9.68□□□□□ -0.86
ATP6V1C1-206ENST00000521671 FOXJ1Q92949 421 aa9.68□□□□□ -0.86
ATP6V1C1-206ENST00000521671 SLC24A3Q9HC58 644 aa9.68□□□□□ -0.86
ATP6V1C1-206ENST00000521671 PER1O15534 1290 aaPredicted RBP9.67□□□□□ -0.86
ATP6V1C1-206ENST00000521671 WDR4P57081 412 aaKnown RBP9.67□□□□□ -0.86
ATP6V1C1-206ENST00000521671 AGERQ15109 404 aa9.67□□□□□ -0.86
ATP6V1C1-206ENST00000521671 QPCTQ16769 361 aa9.67□□□□□ -0.86
ATP6V1C1-206ENST00000521671 SLC16A10Q8TF71 515 aa9.67□□□□□ -0.86
ATP6V1C1-206ENST00000521671 NXF1Q9UBU9 619 aaKnown RBP9.67□□□□□ -0.86
ATP6V1C1-206ENST00000521671 TIMP2P16035 220 aa9.66□□□□□ -0.86
ATP6V1C1-206ENST00000521671 LCE2CQ5TA81 110 aa9.66□□□□□ -0.86
ATP6V1C1-206ENST00000521671 BPHLQ86WA6 291 aaPredicted RBP9.66□□□□□ -0.86
ATP6V1C1-206ENST00000521671 HELBQ8NG08 1087 aaPredicted RBP9.66□□□□□ -0.86
ATP6V1C1-206ENST00000521671 ZFP42Q96MM3 310 aa9.66□□□□□ -0.86
ATP6V1C1-206ENST00000521671 CDK15Q96Q40 435 aa9.66□□□□□ -0.86
ATP6V1C1-206ENST00000521671 LILRB3O75022 631 aa9.65□□□□□ -0.86
ATP6V1C1-206ENST00000521671 CLK2P49760 499 aaKnown RBP9.65□□□□□ -0.86
ATP6V1C1-206ENST00000521671 ARID5BQ14865 1188 aa9.65□□□□□ -0.86
ATP6V1C1-206ENST00000521671 MRPL14Q6P1L8 145 aaKnown RBP9.65□□□□□ -0.86
ATP6V1C1-206ENST00000521671 ARMC2Q8NEN0 867 aa9.65□□□□□ -0.86
ATP6V1C1-206ENST00000521671 STK17AQ9UEE5 414 aa9.65□□□□□ -0.86
ATP6V1C1-206ENST00000521671 SCARF1Q14162 830 aa9.64□□□□□ -0.87
ATP6V1C1-206ENST00000521671 NPAS3Q8IXF0 933 aa9.64□□□□□ -0.87
ATP6V1C1-206ENST00000521671 NR5A1Q13285 461 aa9.63□□□□□ -0.87
ATP6V1C1-206ENST00000521671 C4orf48Q5BLP8 95 aa9.63□□□□□ -0.87
ATP6V1C1-206ENST00000521671 NBPF14Q5TI25 921 aa9.63□□□□□ -0.87
ATP6V1C1-206ENST00000521671 RSPH6AQ9H0K4 717 aa9.62□□□□□ -0.87
ATP6V1C1-206ENST00000521671 PURBQ96QR8 312 aaKnown RBP9.61□□□□□ -0.87
ATP6V1C1-206ENST00000521671 KLF16Q9BXK1 252 aaPredicted RBP9.61□□□□□ -0.87
ATP6V1C1-206ENST00000521671 ZIC2O95409 532 aaPredicted RBP9.6□□□□□ -0.87
ATP6V1C1-206ENST00000521671 IRF7Q92985 503 aa9.6□□□□□ -0.87
ATP6V1C1-206ENST00000521671 H3BM21 787 aa9.59□□□□□ -0.87
ATP6V1C1-206ENST00000521671 NR3C2P08235 984 aa9.59□□□□□ -0.87
ATP6V1C1-206ENST00000521671 RTL5Q5HYW3 569 aaPredicted RBP9.59□□□□□ -0.87
ATP6V1C1-206ENST00000521671 C1QTNF2Q9BXJ5 285 aa9.59□□□□□ -0.87
ATP6V1C1-206ENST00000521671 ZFAND3Q9H8U3 227 aa9.59□□□□□ -0.87
ATP6V1C1-206ENST00000521671 VEGFBP49765 207 aa9.58□□□□□ -0.88
ATP6V1C1-206ENST00000521671 SH3RF1Q7Z6J0 888 aa9.58□□□□□ -0.88
ATP6V1C1-206ENST00000521671 ITPKCQ96DU7 683 aa9.58□□□□□ -0.88
ATP6V1C1-206ENST00000521671 GRM5P41594 1212 aa9.57□□□□□ -0.88
ATP6V1C1-206ENST00000521671 GPKOWQ92917 476 aaPredicted RBP eCLIP9.57□□□□□ -0.88
ATP6V1C1-206ENST00000521671 POLR3EQ9NVU0 708 aa9.57□□□□□ -0.88
ATP6V1C1-206ENST00000521671 MAP4K5Q9Y4K4 846 aa9.57□□□□□ -0.88
ATP6V1C1-206ENST00000521671 MAGEB6P1A0A0J9YX57 407 aa9.56□□□□□ -0.88
ATP6V1C1-206ENST00000521671 FSHRP23945 695 aa9.56□□□□□ -0.88
ATP6V1C1-206ENST00000521671 SH3BP5LQ7L8J4 393 aa9.56□□□□□ -0.88
ATP6V1C1-206ENST00000521671 TRMT44Q8IYL2 757 aaKnown RBP9.56□□□□□ -0.88
ATP6V1C1-206ENST00000521671 UPP2O95045 317 aa9.55□□□□□ -0.88
ATP6V1C1-206ENST00000521671 GMPRP36959 345 aa9.55□□□□□ -0.88
ATP6V1C1-206ENST00000521671 C6orf118Q5T5N4 469 aa9.54□□□□□ -0.88
ATP6V1C1-206ENST00000521671 VASH1Q7L8A9 365 aaPredicted RBP9.54□□□□□ -0.88
ATP6V1C1-206ENST00000521671 MEIOBQ8N635 442 aa9.54□□□□□ -0.88
ATP6V1C1-206ENST00000521671 SOBPA7XYQ1 873 aa9.53□□□□□ -0.88
ATP6V1C1-206ENST00000521671 LINC00528Q8N1L1 170 aa9.53□□□□□ -0.88
ATP6V1C1-206ENST00000521671 CARD14Q9BXL6 1004 aa9.53□□□□□ -0.88
ATP6V1C1-206ENST00000521671 FAM181BA6NEQ2 426 aa9.52□□□□□ -0.89
ATP6V1C1-206ENST00000521671 MAN1A2O60476 641 aa9.52□□□□□ -0.89
ATP6V1C1-206ENST00000521671 BMP2P12643 396 aa9.52□□□□□ -0.89
ATP6V1C1-206ENST00000521671 ERBB4Q15303 1308 aa9.52□□□□□ -0.89
ATP6V1C1-206ENST00000521671 CTDSPL2Q05D32 466 aa9.51□□□□□ -0.89
ATP6V1C1-206ENST00000521671 EMILIN1Q9Y6C2 1016 aa9.51□□□□□ -0.89
ATP6V1C1-206ENST00000521671 ERFEQ4G0M1 354 aa9.5□□□□□ -0.89
ATP6V1C1-206ENST00000521671 SH3D19Q5HYK7 790 aa9.5□□□□□ -0.89
ATP6V1C1-206ENST00000521671 CCDC116Q8IYX3 515 aa9.5□□□□□ -0.89
ATP6V1C1-206ENST00000521671 SKIV2LQ15477 1246 aaKnown RBP9.49□□□□□ -0.89
ATP6V1C1-206ENST00000521671 ZSCAN1Q8NBB4 408 aa9.49□□□□□ -0.89
ATP6V1C1-206ENST00000521671 DDRGK1Q96HY6 314 aa9.49□□□□□ -0.89
ATP6V1C1-206ENST00000521671 PDXDC2PQ6P474 469 aa9.48□□□□□ -0.89
ATP6V1C1-206ENST00000521671 LRRN4Q8WUT4 740 aa9.48□□□□□ -0.89
ATP6V1C1-206ENST00000521671 SLC10A4Q96EP9 437 aa9.48□□□□□ -0.89
ATP6V1C1-206ENST00000521671 ARHGAP9Q9BRR9 750 aa9.48□□□□□ -0.89
ATP6V1C1-206ENST00000521671 TSEN34Q9BSV6 310 aaKnown RBP9.48□□□□□ -0.89
ATP6V1C1-206ENST00000521671 KDM4CQ9H3R0 1056 aa9.48□□□□□ -0.89
ATP6V1C1-206ENST00000521671 FKBPLQ9UIM3 349 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms