RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 U2AF1L5P0DN76 240 aaPredicted RBP24.3■■□□□ 1.48
TRAPPC9-210ENST00000521667 U2AF1Q01081 240 aaKnown RBP eCLIP24.3■■□□□ 1.48
TRAPPC9-210ENST00000521667 PIK3R4Q99570 1358 aa24.29■■□□□ 1.48
TRAPPC9-210ENST00000521667 TRMT2AQ8IZ69 625 aaKnown RBP24.29■■□□□ 1.48
TRAPPC9-210ENST00000521667 XRN1Q8IZH2 1706 aaKnown RBP24.28■■□□□ 1.48
TRAPPC9-210ENST00000521667 PNPLA6Q8IY17 1366 aa24.28■■□□□ 1.48
TRAPPC9-210ENST00000521667 AKAP12Q02952 1782 aa24.28■■□□□ 1.48
TRAPPC9-210ENST00000521667 TOPAZ1Q8N9V7 1692 aa24.28■■□□□ 1.48
TRAPPC9-210ENST00000521667 TCP11L2Q8N4U5 519 aa24.27■■□□□ 1.48
TRAPPC9-210ENST00000521667 ITSN1Q15811 1721 aa24.27■■□□□ 1.48
TRAPPC9-210ENST00000521667 NME9Q86XW9 330 aa24.27■■□□□ 1.48
TRAPPC9-210ENST00000521667 PLEKHG3A1L390 1219 aa24.26■■□□□ 1.47
TRAPPC9-210ENST00000521667 E9PSI1 815 aa24.26■■□□□ 1.47
TRAPPC9-210ENST00000521667 B4GALNT3Q6L9W6 998 aa24.25■■□□□ 1.47
TRAPPC9-210ENST00000521667 WWC1Q8IX03 1113 aa24.25■■□□□ 1.47
TRAPPC9-210ENST00000521667 NPHP4O75161 1426 aaPredicted RBP24.25■■□□□ 1.47
TRAPPC9-210ENST00000521667 KCNA6P17658 529 aa24.24■■□□□ 1.47
TRAPPC9-210ENST00000521667 SPINK5Q9NQ38 1064 aaPredicted RBP24.24■■□□□ 1.47
TRAPPC9-210ENST00000521667 U2SURPO15042 1029 aaKnown RBP24.23■■□□□ 1.47
TRAPPC9-210ENST00000521667 DIAPH1O60610 1272 aaKnown RBP24.23■■□□□ 1.47
TRAPPC9-210ENST00000521667 NCBP3Q53F19 620 aaKnown RBP24.23■■□□□ 1.47
TRAPPC9-210ENST00000521667 POLKQ9UBT6 870 aa24.23■■□□□ 1.47
TRAPPC9-210ENST00000521667 ACEP12821 1306 aa24.22■■□□□ 1.47
TRAPPC9-210ENST00000521667 NUTM2FA1L443 756 aa24.22■■□□□ 1.47
TRAPPC9-210ENST00000521667 COG3Q96JB2 828 aa24.22■■□□□ 1.47
TRAPPC9-210ENST00000521667 PHF23Q9BUL5 403 aaPredicted RBP24.22■■□□□ 1.47
TRAPPC9-210ENST00000521667 RRP7AQ9Y3A4 280 aaKnown RBP24.22■■□□□ 1.47
TRAPPC9-210ENST00000521667 NKTRP30414 1462 aaKnown RBP24.21■■□□□ 1.47
TRAPPC9-210ENST00000521667 AATKQ6ZMQ8 1374 aa24.21■■□□□ 1.47
TRAPPC9-210ENST00000521667 NEUROD2Q15784 382 aa24.21■■□□□ 1.47
TRAPPC9-210ENST00000521667 CCDC27Q2M243 656 aa24.21■■□□□ 1.47
TRAPPC9-210ENST00000521667 DMRT2Q9Y5R5 561 aa24.21■■□□□ 1.47
TRAPPC9-210ENST00000521667 CHD2O14647 1828 aaKnown RBP24.21■■□□□ 1.47
TRAPPC9-210ENST00000521667 HSPA2P54652 639 aa24.2■■□□□ 1.47
TRAPPC9-210ENST00000521667 ZRANB1Q9UGI0 708 aa24.2■■□□□ 1.47
TRAPPC9-210ENST00000521667 TSHZ2Q9NRE2 1034 aa24.2■■□□□ 1.46
TRAPPC9-210ENST00000521667 NRKQ7Z2Y5 1582 aa24.19■■□□□ 1.46
TRAPPC9-210ENST00000521667 FBLN1P23142 703 aa24.18■■□□□ 1.46
TRAPPC9-210ENST00000521667 PLEKHF1Q96S99 279 aa24.18■■□□□ 1.46
TRAPPC9-210ENST00000521667 TTC21BQ7Z4L5 1316 aa24.18■■□□□ 1.46
TRAPPC9-210ENST00000521667 USP6P35125 1406 aa24.18■■□□□ 1.46
TRAPPC9-210ENST00000521667 PPM1GO15355 546 aaPredicted RBP24.17■■□□□ 1.46
TRAPPC9-210ENST00000521667 WDR63Q8IWG1 891 aa24.17■■□□□ 1.46
TRAPPC9-210ENST00000521667 CCDC136Q96JN2 1154 aa24.16■■□□□ 1.46
TRAPPC9-210ENST00000521667 PLIN1O60240 522 aa24.15■■□□□ 1.46
TRAPPC9-210ENST00000521667 EXOC6Q8TAG9 804 aa24.15■■□□□ 1.46
TRAPPC9-210ENST00000521667 RBM33Q96EV2 1170 aaKnown RBP24.15■■□□□ 1.46
TRAPPC9-210ENST00000521667 PNNQ9H307 717 aaKnown RBP24.15■■□□□ 1.46
TRAPPC9-210ENST00000521667 EMILIN1Q9Y6C2 1016 aa24.15■■□□□ 1.46
TRAPPC9-210ENST00000521667 CDK12Q9NYV4 1490 aaPredicted RBP24.15■■□□□ 1.46
TRAPPC9-210ENST00000521667 ANKARQ7Z5J8 1434 aa24.14■■□□□ 1.45
TRAPPC9-210ENST00000521667 MAPK8IP3Q9UPT6 1336 aa24.14■■□□□ 1.45
TRAPPC9-210ENST00000521667 MAP2P11137 1827 aaKnown RBP24.12■■□□□ 1.45
TRAPPC9-210ENST00000521667 SSH2Q76I76 1423 aa24.12■■□□□ 1.45
TRAPPC9-210ENST00000521667 LMTK3Q96Q04 1460 aa24.12■■□□□ 1.45
TRAPPC9-210ENST00000521667 OVOS2A0A0J9YW53 1432 aa24.11■■□□□ 1.45
TRAPPC9-210ENST00000521667 OVOS2Q6IE36 1432 aa24.11■■□□□ 1.45
TRAPPC9-210ENST00000521667 FCHSD2O94868 740 aa24.11■■□□□ 1.45
TRAPPC9-210ENST00000521667 PMFBP1Q8TBY8 1022 aa24.11■■□□□ 1.45
TRAPPC9-210ENST00000521667 TMPOP42166 694 aaKnown RBP24.1■■□□□ 1.45
TRAPPC9-210ENST00000521667 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.1■■□□□ 1.45
TRAPPC9-210ENST00000521667 TTC21AQ8NDW8 1320 aa24.09■■□□□ 1.45
TRAPPC9-210ENST00000521667 IL13P35225 146 aa24.08■■□□□ 1.45
TRAPPC9-210ENST00000521667 RRS1Q15050 365 aaKnown RBP24.08■■□□□ 1.45
TRAPPC9-210ENST00000521667 NGDNQ8NEJ9 315 aaKnown RBP24.08■■□□□ 1.45
TRAPPC9-210ENST00000521667 FMN2Q9NZ56 1722 aa24.07■■□□□ 1.44
TRAPPC9-210ENST00000521667 NALCNQ8IZF0 1738 aa24.07■■□□□ 1.44
TRAPPC9-210ENST00000521667 LRRC7Q96NW7 1537 aa24.07■■□□□ 1.44
TRAPPC9-210ENST00000521667 RSPH6AQ9H0K4 717 aa24.06■■□□□ 1.44
TRAPPC9-210ENST00000521667 CRBNQ96SW2 442 aa24.05■■□□□ 1.44
TRAPPC9-210ENST00000521667 MYH16Q9H6N6 1097 aa24.05■■□□□ 1.44
TRAPPC9-210ENST00000521667 RGPD8O14715 1765 aaPredicted RBP24.05■■□□□ 1.44
TRAPPC9-210ENST00000521667 USP31Q70CQ4 1352 aa24.05■■□□□ 1.44
TRAPPC9-210ENST00000521667 PRKAR2BP31323 418 aa24.04■■□□□ 1.44
TRAPPC9-210ENST00000521667 C20orf194Q5TEA3 1177 aa24.04■■□□□ 1.44
TRAPPC9-210ENST00000521667 TRIM35Q9UPQ4 493 aa24.04■■□□□ 1.44
TRAPPC9-210ENST00000521667 NWD1Q149M9 1564 aa24.04■■□□□ 1.44
TRAPPC9-210ENST00000521667 NEFMP07197 916 aa24.03■■□□□ 1.44
TRAPPC9-210ENST00000521667 RIPK4P57078 832 aa24.02■■□□□ 1.44
TRAPPC9-210ENST00000521667 BCAR3O75815 825 aa24.01■■□□□ 1.43
TRAPPC9-210ENST00000521667 STRCQ7RTU9 1775 aa24.01■■□□□ 1.43
TRAPPC9-210ENST00000521667 HMOX1P09601 288 aa24■■□□□ 1.43
TRAPPC9-210ENST00000521667 ADGRL3Q9HAR2 1447 aa24■■□□□ 1.43
TRAPPC9-210ENST00000521667 IL16Q14005 1332 aa23.99■■□□□ 1.43
TRAPPC9-210ENST00000521667 STRCP1A6NGW2 1772 aa23.99■■□□□ 1.43
TRAPPC9-210ENST00000521667 C14orf37Q86TY3 774 aa23.96■■□□□ 1.43
TRAPPC9-210ENST00000521667 PROSER2Q86WR7 435 aaPredicted RBP23.96■■□□□ 1.43
TRAPPC9-210ENST00000521667 RARSP54136 660 aaKnown RBP23.95■■□□□ 1.42
TRAPPC9-210ENST00000521667 NFE2L2Q16236 605 aa23.95■■□□□ 1.42
TRAPPC9-210ENST00000521667 PHACTR3Q96KR7 559 aa23.95■■□□□ 1.42
TRAPPC9-210ENST00000521667 FANCIQ9NVI1 1328 aa23.95■■□□□ 1.42
TRAPPC9-210ENST00000521667 PIK3C2AO00443 1686 aa23.95■■□□□ 1.42
TRAPPC9-210ENST00000521667 EIF4A2Q14240 407 aaKnown RBP23.94■■□□□ 1.42
TRAPPC9-210ENST00000521667 PHF8Q9UPP1 1060 aa23.94■■□□□ 1.42
TRAPPC9-210ENST00000521667 PEAK1Q9H792 1746 aa23.93■■□□□ 1.42
TRAPPC9-210ENST00000521667 CT47B1P0C2W7 299 aaPredicted RBP23.93■■□□□ 1.42
TRAPPC9-210ENST00000521667 TSR2Q969E8 191 aaKnown RBP23.93■■□□□ 1.42
TRAPPC9-210ENST00000521667 SOX12O15370 315 aa23.92■■□□□ 1.42
TRAPPC9-210ENST00000521667 MAP3K19Q56UN5 1328 aa23.91■■□□□ 1.42
TRAPPC9-210ENST00000521667 NLRP6P59044 892 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms