RNA–Protein interactions for RNA: ENST00000521610.5

HDAC2-212, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-212ENST00000521610 ALS2Q96Q42 1657 aa15.1■□□□□ 0.01
HDAC2-212ENST00000521610 SLC24A1O60721 1099 aa15.1■□□□□ 0.01
HDAC2-212ENST00000521610 HAP1P54257 671 aaPredicted RBP15.1■□□□□ 0.01
HDAC2-212ENST00000521610 MARF1Q9Y4F3 1742 aaKnown RBP15.09■□□□□ 0.01
HDAC2-212ENST00000521610 ST20-MTHFSA0A0A6YYL1 179 aa15.09■□□□□ 0.01
HDAC2-212ENST00000521610 SOCS7O14512 581 aa15.09■□□□□ 0.01
HDAC2-212ENST00000521610 FNBP4Q8N3X1 1017 aaPredicted RBP15.09■□□□□ 0.01
HDAC2-212ENST00000521610 CABLES1Q8TDN4 633 aa15.09■□□□□ 0.01
HDAC2-212ENST00000521610 ATAD2Q6PL18 1390 aa15.09■□□□□ 0.01
HDAC2-212ENST00000521610 PLEKHG5O94827 1062 aa15.08■□□□□ 0
HDAC2-212ENST00000521610 POTEDQ86YR6 584 aa15.08■□□□□ 0
HDAC2-212ENST00000521610 BRD4O60885 1362 aaPredicted RBP15.08■□□□□ 0
HDAC2-212ENST00000521610 PUS7Q96PZ0 661 aaKnown RBP15.07■□□□□ 0
HDAC2-212ENST00000521610 QTRT2Q9H974 415 aaKnown RBP15.07■□□□□ 0
HDAC2-212ENST00000521610 USP21Q9UK80 565 aa15.07■□□□□ 0
HDAC2-212ENST00000521610 RXRBP28702 533 aa15.06■□□□□ 0
HDAC2-212ENST00000521610 TESK2Q96S53 571 aa15.06■□□□□ 0
HDAC2-212ENST00000521610 ZNF692Q9BU19 519 aaPredicted RBP15.06■□□□□ 0
HDAC2-212ENST00000521610 USP47Q96K76 1375 aa15.06■□□□□ 0
HDAC2-212ENST00000521610 ABCA3Q99758 1704 aa15.06■□□□□ 0
HDAC2-212ENST00000521610 USP6P35125 1406 aa15.04■□□□□ -0
HDAC2-212ENST00000521610 ABTB2Q8N961 1025 aa15.04■□□□□ -0
HDAC2-212ENST00000521610 TRPC5Q9UL62 973 aaPredicted RBP15.04■□□□□ -0
HDAC2-212ENST00000521610 RBM6P78332 1123 aaKnown RBP15.03■□□□□ -0
HDAC2-212ENST00000521610 SLIT2O94813 1529 aa15.02■□□□□ -0
HDAC2-212ENST00000521610 BCL9LQ86UU0 1499 aa15.02■□□□□ -0
HDAC2-212ENST00000521610 NUTM2GQ5VZR2 741 aa15.02■□□□□ -0
HDAC2-212ENST00000521610 NLRP13Q86W25 1043 aa15.02■□□□□ -0
HDAC2-212ENST00000521610 CRYBG1Q9Y4K1 1723 aa15.02□□□□□ -0.01
HDAC2-212ENST00000521610 CPSF1Q10570 1443 aaKnown RBP15.01□□□□□ -0.01
HDAC2-212ENST00000521610 FAM83GA6ND36 823 aa15.01□□□□□ -0.01
HDAC2-212ENST00000521610 TMF1P82094 1093 aa15.01□□□□□ -0.01
HDAC2-212ENST00000521610 UNC5CLQ8IV45 518 aa15.01□□□□□ -0.01
HDAC2-212ENST00000521610 TMC1Q8TDI8 760 aa15.01□□□□□ -0.01
HDAC2-212ENST00000521610 AKAP12Q02952 1782 aa15.01□□□□□ -0.01
HDAC2-212ENST00000521610 ATRNO75882 1429 aa15□□□□□ -0.01
HDAC2-212ENST00000521610 SSH2Q76I76 1423 aa15□□□□□ -0.01
HDAC2-212ENST00000521610 KCNA4P22459 653 aa15□□□□□ -0.01
HDAC2-212ENST00000521610 CDK12Q9NYV4 1490 aaPredicted RBP15□□□□□ -0.01
HDAC2-212ENST00000521610 KTN1Q86UP2 1357 aaKnown RBP14.99□□□□□ -0.01
HDAC2-212ENST00000521610 TTC21BQ7Z4L5 1316 aa14.99□□□□□ -0.01
HDAC2-212ENST00000521610 HDGFL2Q7Z4V5 671 aaPredicted RBP14.99□□□□□ -0.01
HDAC2-212ENST00000521610 SLC12A5Q9H2X9 1139 aa14.99□□□□□ -0.01
HDAC2-212ENST00000521610 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.99□□□□□ -0.01
HDAC2-212ENST00000521610 PHRF1Q9P1Y6 1649 aaKnown RBP14.99□□□□□ -0.01
HDAC2-212ENST00000521610 USP19O94966 1318 aa14.98□□□□□ -0.01
HDAC2-212ENST00000521610 TTC21AQ8NDW8 1320 aa14.98□□□□□ -0.01
HDAC2-212ENST00000521610 NWD2Q9ULI1 1742 aa14.98□□□□□ -0.01
HDAC2-212ENST00000521610 PLCH1Q4KWH8 1693 aa14.98□□□□□ -0.01
HDAC2-212ENST00000521610 NLRP6P59044 892 aa14.98□□□□□ -0.01
HDAC2-212ENST00000521610 TERF2IPQ9NYB0 399 aa14.98□□□□□ -0.01
HDAC2-212ENST00000521610 NINLQ9Y2I6 1382 aa14.98□□□□□ -0.01
HDAC2-212ENST00000521610 CDCA8Q53HL2 280 aa14.97□□□□□ -0.01
HDAC2-212ENST00000521610 GJD4Q96KN9 370 aaPredicted RBP14.97□□□□□ -0.01
HDAC2-212ENST00000521610 PRDM11Q9NQV5 511 aa14.97□□□□□ -0.01
HDAC2-212ENST00000521610 COL14A1Q05707 1796 aaKnown RBP14.97□□□□□ -0.01
HDAC2-212ENST00000521610 CD163L1Q9NR16 1453 aa14.96□□□□□ -0.01
HDAC2-212ENST00000521610 GCP02774 474 aa14.96□□□□□ -0.01
HDAC2-212ENST00000521610 ZC3H6P61129 1189 aaKnown RBP14.96□□□□□ -0.01
HDAC2-212ENST00000521610 MON2Q7Z3U7 1717 aa14.96□□□□□ -0.01
HDAC2-212ENST00000521610 BTG4Q9NY30 223 aa14.96□□□□□ -0.01
HDAC2-212ENST00000521610 KIAA0232Q92628 1395 aa14.96□□□□□ -0.02
HDAC2-212ENST00000521610 NRKQ7Z2Y5 1582 aa14.95□□□□□ -0.02
HDAC2-212ENST00000521610 EIF4G2P78344 907 aaKnown RBP eCLIP14.95□□□□□ -0.02
HDAC2-212ENST00000521610 VPS72Q15906 364 aa14.95□□□□□ -0.02
HDAC2-212ENST00000521610 PIK3C2AO00443 1686 aa14.95□□□□□ -0.02
HDAC2-212ENST00000521610 A0A1W2PP64 1363 aa14.94□□□□□ -0.02
HDAC2-212ENST00000521610 CPDO75976 1380 aa14.94□□□□□ -0.02
HDAC2-212ENST00000521610 RGS12O14924 1447 aa14.93□□□□□ -0.02
HDAC2-212ENST00000521610 EDC4Q6P2E9 1401 aaKnown RBP14.93□□□□□ -0.02
HDAC2-212ENST00000521610 CHRNA2Q15822 529 aa14.93□□□□□ -0.02
HDAC2-212ENST00000521610 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.93□□□□□ -0.02
HDAC2-212ENST00000521610 CCDC9Q9Y3X0 531 aaKnown RBP14.93□□□□□ -0.02
HDAC2-212ENST00000521610 SLIT3O75094 1523 aa14.92□□□□□ -0.02
HDAC2-212ENST00000521610 KCNH5Q8NCM2 988 aa14.92□□□□□ -0.02
HDAC2-212ENST00000521610 NRAPQ86VF7 1730 aa14.92□□□□□ -0.02
HDAC2-212ENST00000521610 USP31Q70CQ4 1352 aa14.91□□□□□ -0.02
HDAC2-212ENST00000521610 HSPA5P11021 654 aaKnown RBP14.91□□□□□ -0.02
HDAC2-212ENST00000521610 GLI3P10071 1580 aa14.9□□□□□ -0.02
HDAC2-212ENST00000521610 ANKRD36BQ8N2N9 1353 aa14.9□□□□□ -0.02
HDAC2-212ENST00000521610 EVA1CP58658 441 aa14.89□□□□□ -0.03
HDAC2-212ENST00000521610 NME9Q86XW9 330 aa14.89□□□□□ -0.03
HDAC2-212ENST00000521610 ONECUT3O60422 494 aaPredicted RBP14.88□□□□□ -0.03
HDAC2-212ENST00000521610 STRN4Q9NRL3 753 aa14.88□□□□□ -0.03
HDAC2-212ENST00000521610 ZRANB1Q9UGI0 708 aa14.88□□□□□ -0.03
HDAC2-212ENST00000521610 USP54Q70EL1 1684 aa14.87□□□□□ -0.03
HDAC2-212ENST00000521610 LMO7Q8WWI1 1683 aa14.87□□□□□ -0.03
HDAC2-212ENST00000521610 CAMTA1Q9Y6Y1 1673 aa14.87□□□□□ -0.03
HDAC2-212ENST00000521610 AATKQ6ZMQ8 1374 aa14.87□□□□□ -0.03
HDAC2-212ENST00000521610 ZBTB7CA1YPR0 619 aa14.87□□□□□ -0.03
HDAC2-212ENST00000521610 ARHGEF25Q86VW2 580 aa14.87□□□□□ -0.03
HDAC2-212ENST00000521610 RNF216Q9NWF9 866 aaPredicted RBP14.87□□□□□ -0.03
HDAC2-212ENST00000521610 SPATA31A5Q5VU36 1347 aa14.87□□□□□ -0.03
HDAC2-212ENST00000521610 SPATA31A7Q8IWB4 1347 aa14.87□□□□□ -0.03
HDAC2-212ENST00000521610 SOX12O15370 315 aa14.86□□□□□ -0.03
HDAC2-212ENST00000521610 NPM3O75607 178 aaKnown RBP14.85□□□□□ -0.03
HDAC2-212ENST00000521610 HOXD11P31277 338 aaPredicted RBP14.85□□□□□ -0.03
HDAC2-212ENST00000521610 SEPT12Q8IYM1 358 aa14.85□□□□□ -0.03
HDAC2-212ENST00000521610 NFAT5O94916 1531 aa14.85□□□□□ -0.03
HDAC2-212ENST00000521610 SPATA31A1Q5TZJ5 1347 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms