RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 SOS2Q07890 1332 aaPredicted RBP30.11■■■□□ 2.41
PTP4A3-204ENST00000521578 USP6P35125 1406 aa30.1■■■□□ 2.41
PTP4A3-204ENST00000521578 PAK3O75914 559 aaPredicted RBP30.09■■■□□ 2.41
PTP4A3-204ENST00000521578 HSPA1LP34931 641 aa30.08■■■□□ 2.41
PTP4A3-204ENST00000521578 MON2Q7Z3U7 1717 aa30.07■■■□□ 2.4
PTP4A3-204ENST00000521578 CARD14Q9BXL6 1004 aa30.07■■■□□ 2.4
PTP4A3-204ENST00000521578 COL16A1Q07092 1604 aaPredicted RBP30.05■■■□□ 2.4
PTP4A3-204ENST00000521578 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.05■■■□□ 2.4
PTP4A3-204ENST00000521578 TRPM3Q9HCF6 1732 aaPredicted RBP30.04■■■□□ 2.4
PTP4A3-204ENST00000521578 LMOD2Q6P5Q4 547 aa30.04■■■□□ 2.4
PTP4A3-204ENST00000521578 TTC21BQ7Z4L5 1316 aa30.04■■■□□ 2.4
PTP4A3-204ENST00000521578 SSH2Q76I76 1423 aa30.03■■■□□ 2.4
PTP4A3-204ENST00000521578 EDC4Q6P2E9 1401 aaKnown RBP30.02■■■□□ 2.4
PTP4A3-204ENST00000521578 SBNO1A3KN83 1393 aa30.02■■■□□ 2.4
PTP4A3-204ENST00000521578 NSD3Q9BZ95 1437 aa30.02■■■□□ 2.4
PTP4A3-204ENST00000521578 LRRC59Q96AG4 307 aaKnown RBP30.02■■■□□ 2.4
PTP4A3-204ENST00000521578 NRKQ7Z2Y5 1582 aa30.01■■■□□ 2.4
PTP4A3-204ENST00000521578 SPATA31A3Q5VYP0 1347 aa30.01■■■□□ 2.39
PTP4A3-204ENST00000521578 PRKRIP1Q9H875 184 aaPredicted RBP29.99■■■□□ 2.39
PTP4A3-204ENST00000521578 BRD4O60885 1362 aaPredicted RBP29.99■■■□□ 2.39
PTP4A3-204ENST00000521578 TNS3Q68CZ2 1445 aa29.99■■■□□ 2.39
PTP4A3-204ENST00000521578 NUTM2GQ5VZR2 741 aa29.98■■■□□ 2.39
PTP4A3-204ENST00000521578 ABTB2Q8N961 1025 aa29.98■■■□□ 2.39
PTP4A3-204ENST00000521578 TTC21AQ8NDW8 1320 aa29.96■■■□□ 2.39
PTP4A3-204ENST00000521578 PLEKHG5O94827 1062 aa29.96■■■□□ 2.39
PTP4A3-204ENST00000521578 NME9Q86XW9 330 aa29.96■■■□□ 2.39
PTP4A3-204ENST00000521578 ALS2Q96Q42 1657 aa29.95■■■□□ 2.39
PTP4A3-204ENST00000521578 KNSTRNQ9Y448 316 aa29.95■■■□□ 2.38
PTP4A3-204ENST00000521578 PER1O15534 1290 aaPredicted RBP29.93■■■□□ 2.38
PTP4A3-204ENST00000521578 ZRANB1Q9UGI0 708 aa29.93■■■□□ 2.38
PTP4A3-204ENST00000521578 PIK3C2AO00443 1686 aa29.93■■■□□ 2.38
PTP4A3-204ENST00000521578 ARHGEF10O15013 1369 aa29.92■■■□□ 2.38
PTP4A3-204ENST00000521578 CGNL1Q0VF96 1302 aa29.91■■■□□ 2.38
PTP4A3-204ENST00000521578 NLRP6P59044 892 aa29.91■■■□□ 2.38
PTP4A3-204ENST00000521578 FYB1O15117 783 aa29.91■■■□□ 2.38
PTP4A3-204ENST00000521578 PNPLA6Q8IY17 1366 aa29.9■■■□□ 2.38
PTP4A3-204ENST00000521578 GGNBP2Q9H3C7 697 aa29.89■■■□□ 2.38
PTP4A3-204ENST00000521578 JCADQ9P266 1359 aa29.89■■■□□ 2.38
PTP4A3-204ENST00000521578 CNGB1Q14028 1251 aaPredicted RBP29.88■■■□□ 2.37
PTP4A3-204ENST00000521578 CABLES1Q8TDN4 633 aa29.87■■■□□ 2.37
PTP4A3-204ENST00000521578 KIF20BQ96Q89 1820 aa29.87■■■□□ 2.37
PTP4A3-204ENST00000521578 ILDR1Q86SU0 546 aaPredicted RBP29.86■■■□□ 2.37
PTP4A3-204ENST00000521578 NLRP13Q86W25 1043 aa29.86■■■□□ 2.37
PTP4A3-204ENST00000521578 AMER1Q5JTC6 1135 aaPredicted RBP29.85■■■□□ 2.37
PTP4A3-204ENST00000521578 SHPRHQ149N8 1683 aa29.84■■■□□ 2.37
PTP4A3-204ENST00000521578 COG3Q96JB2 828 aa29.83■■■□□ 2.37
PTP4A3-204ENST00000521578 USP31Q70CQ4 1352 aa29.83■■■□□ 2.37
PTP4A3-204ENST00000521578 CC2D1BQ5T0F9 858 aaKnown RBP29.82■■■□□ 2.36
PTP4A3-204ENST00000521578 MED1Q15648 1581 aaPredicted RBP29.81■■■□□ 2.36
PTP4A3-204ENST00000521578 COL22A1Q8NFW1 1626 aaPredicted RBP29.81■■■□□ 2.36
PTP4A3-204ENST00000521578 MARF1Q9Y4F3 1742 aaKnown RBP29.81■■■□□ 2.36
PTP4A3-204ENST00000521578 OVOS2A0A0J9YW53 1432 aa29.81■■■□□ 2.36
PTP4A3-204ENST00000521578 OVOS2Q6IE36 1432 aa29.81■■■□□ 2.36
PTP4A3-204ENST00000521578 SOX12O15370 315 aa29.8■■■□□ 2.36
PTP4A3-204ENST00000521578 NUTM2BA6NNL0 878 aaPredicted RBP29.79■■■□□ 2.36
PTP4A3-204ENST00000521578 NUTM2EB1AL46 878 aaPredicted RBP29.79■■■□□ 2.36
PTP4A3-204ENST00000521578 HAP1P54257 671 aaPredicted RBP29.79■■■□□ 2.36
PTP4A3-204ENST00000521578 NUTM2AQ8IVF1 878 aaPredicted RBP29.79■■■□□ 2.36
PTP4A3-204ENST00000521578 CCDC184Q52MB2 194 aa29.79■■■□□ 2.36
PTP4A3-204ENST00000521578 USP19O94966 1318 aa29.79■■■□□ 2.36
PTP4A3-204ENST00000521578 NSD2O96028 1365 aa29.77■■■□□ 2.36
PTP4A3-204ENST00000521578 CRYBG1Q9Y4K1 1723 aa29.76■■■□□ 2.36
PTP4A3-204ENST00000521578 USP54Q70EL1 1684 aa29.76■■■□□ 2.36
PTP4A3-204ENST00000521578 GCP02774 474 aa29.76■■■□□ 2.35
PTP4A3-204ENST00000521578 ABCA3Q99758 1704 aa29.75■■■□□ 2.35
PTP4A3-204ENST00000521578 PHRF1Q9P1Y6 1649 aaKnown RBP29.74■■■□□ 2.35
PTP4A3-204ENST00000521578 SPATA31A6Q5VVP1 1343 aa29.74■■■□□ 2.35
PTP4A3-204ENST00000521578 ANKRD26Q9UPS8 1709 aa29.74■■■□□ 2.35
PTP4A3-204ENST00000521578 TNNT2P45379 298 aaPredicted RBP29.74■■■□□ 2.35
PTP4A3-204ENST00000521578 MORC1Q86VD1 984 aa29.74■■■□□ 2.35
PTP4A3-204ENST00000521578 MRS2Q9HD23 443 aa29.74■■■□□ 2.35
PTP4A3-204ENST00000521578 NPC1L1Q9UHC9 1359 aa29.73■■■□□ 2.35
PTP4A3-204ENST00000521578 SLIT3O75094 1523 aa29.73■■■□□ 2.35
PTP4A3-204ENST00000521578 FBLN1P23142 703 aa29.73■■■□□ 2.35
PTP4A3-204ENST00000521578 ADAMTS2O95450 1211 aa29.71■■■□□ 2.35
PTP4A3-204ENST00000521578 ZC3H6P61129 1189 aaKnown RBP29.71■■■□□ 2.35
PTP4A3-204ENST00000521578 KCNH5Q8NCM2 988 aa29.71■■■□□ 2.35
PTP4A3-204ENST00000521578 HNRNPUQ00839 825 aaKnown RBP eCLIP29.7■■■□□ 2.341e-11■■■□□ 18.2
PTP4A3-204ENST00000521578 SUPT16HQ9Y5B9 1047 aaKnown RBP29.7■■■□□ 2.34
PTP4A3-204ENST00000521578 ZBTB7CA1YPR0 619 aa29.68■■■□□ 2.34
PTP4A3-204ENST00000521578 LRP6O75581 1613 aa29.68■■■□□ 2.34
PTP4A3-204ENST00000521578 NFAT5O94916 1531 aa29.67■■■□□ 2.34
PTP4A3-204ENST00000521578 KIAA0232Q92628 1395 aa29.65■■■□□ 2.34
PTP4A3-204ENST00000521578 RRS1Q15050 365 aaKnown RBP29.64■■■□□ 2.34
PTP4A3-204ENST00000521578 CHRNA2Q15822 529 aa29.62■■■□□ 2.33
PTP4A3-204ENST00000521578 PRDM11Q9NQV5 511 aa29.62■■■□□ 2.33
PTP4A3-204ENST00000521578 MEX3CQ5U5Q3 659 aaKnown RBP29.61■■■□□ 2.33
PTP4A3-204ENST00000521578 ARHGEF25Q86VW2 580 aa29.61■■■□□ 2.33
PTP4A3-204ENST00000521578 RALBP1Q15311 655 aa29.59■■■□□ 2.33
PTP4A3-204ENST00000521578 MAP3K19Q56UN5 1328 aa29.59■■■□□ 2.33
PTP4A3-204ENST00000521578 MAP2P11137 1827 aaKnown RBP29.59■■■□□ 2.33
PTP4A3-204ENST00000521578 LTN1O94822 1766 aa29.59■■■□□ 2.33
PTP4A3-204ENST00000521578 CPDO75976 1380 aa29.59■■■□□ 2.33
PTP4A3-204ENST00000521578 PARD3Q8TEW0 1356 aa29.59■■■□□ 2.33
PTP4A3-204ENST00000521578 FAM83GA6ND36 823 aa29.59■■■□□ 2.33
PTP4A3-204ENST00000521578 FAM9BQ8IZU0 186 aa29.59■■■□□ 2.33
PTP4A3-204ENST00000521578 AATKQ6ZMQ8 1374 aa29.58■■■□□ 2.33
PTP4A3-204ENST00000521578 C8orf37Q96NL8 207 aa29.58■■■□□ 2.33
PTP4A3-204ENST00000521578 EMILIN1Q9Y6C2 1016 aa29.58■■■□□ 2.33
PTP4A3-204ENST00000521578 POLKQ9UBT6 870 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms