RNA–Protein interactions for RNA: ENST00000520724.5

RUNX1T1-227, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 2 BASIC

Gene RUNX1T1, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-227ENST00000520724 NPHP3Q7Z494 1330 aa15.14■□□□□ 0.01
RUNX1T1-227ENST00000520724 BBXQ8WY36 941 aaPredicted RBP15.14■□□□□ 0.01
RUNX1T1-227ENST00000520724 MYOM2P54296 1465 aa15.13■□□□□ 0.01
RUNX1T1-227ENST00000520724 PLEKHH1Q9ULM0 1364 aa15.12■□□□□ 0.01
RUNX1T1-227ENST00000520724 PXDNQ92626 1479 aa15.12■□□□□ 0.01
RUNX1T1-227ENST00000520724 GTF2E1P29083 439 aaPredicted RBP15.11■□□□□ 0.01
RUNX1T1-227ENST00000520724 GJD4Q96KN9 370 aaPredicted RBP15.11■□□□□ 0.01
RUNX1T1-227ENST00000520724 NEFMP07197 916 aa15.1■□□□□ 0.01
RUNX1T1-227ENST00000520724 HSP90AA1P07900 732 aaKnown RBP15.1■□□□□ 0.01
RUNX1T1-227ENST00000520724 IPO9Q96P70 1041 aaKnown RBP15.09■□□□□ 0.01
RUNX1T1-227ENST00000520724 COL22A1Q8NFW1 1626 aaPredicted RBP15.09■□□□□ 0.01
RUNX1T1-227ENST00000520724 PPLO60437 1756 aa15.08■□□□□ 0.01
RUNX1T1-227ENST00000520724 CNKSR2Q8WXI2 1034 aa15.08■□□□□ 0.01
RUNX1T1-227ENST00000520724 BCCIPQ9P287 314 aaKnown RBP eCLIP15.08■□□□□ 0
RUNX1T1-227ENST00000520724 CHMP4BQ9H444 224 aaKnown RBP15.07■□□□□ 0
RUNX1T1-227ENST00000520724 ZRANB1Q9UGI0 708 aa15.07■□□□□ 0
RUNX1T1-227ENST00000520724 LRPPRCP42704 1394 aaKnown RBP15.07■□□□□ 0
RUNX1T1-227ENST00000520724 ABCC11Q96J66 1382 aa15.07■□□□□ 0
RUNX1T1-227ENST00000520724 SPATA31E1Q6ZUB1 1445 aa15.07■□□□□ 0
RUNX1T1-227ENST00000520724 SPATA31A3Q5VYP0 1347 aa15.07■□□□□ 0
RUNX1T1-227ENST00000520724 CDC42BPGQ6DT37 1551 aa15.07■□□□□ 0
RUNX1T1-227ENST00000520724 HAP1P54257 671 aaPredicted RBP15.07■□□□□ 0
RUNX1T1-227ENST00000520724 KCNA4P22459 653 aa15.06■□□□□ 0
RUNX1T1-227ENST00000520724 KRT28Q7Z3Y7 464 aa15.06■□□□□ 0
RUNX1T1-227ENST00000520724 UNC5CLQ8IV45 518 aa15.06■□□□□ 0
RUNX1T1-227ENST00000520724 MPHOSPH9Q99550 1183 aa15.06■□□□□ 0
RUNX1T1-227ENST00000520724 TECPR2O15040 1411 aa15.06■□□□□ 0
RUNX1T1-227ENST00000520724 CHRM1P11229 460 aaPredicted RBP15.05■□□□□ 0
RUNX1T1-227ENST00000520724 CABLES1Q8TDN4 633 aa15.05■□□□□ 0
RUNX1T1-227ENST00000520724 STAC3Q96MF2 364 aa15.05■□□□□ -0
RUNX1T1-227ENST00000520724 CCDC144AA2RUR9 1427 aa15.05■□□□□ -0
RUNX1T1-227ENST00000520724 CCDC125Q86Z20 511 aa15.04■□□□□ -0
RUNX1T1-227ENST00000520724 CANXP27824 592 aaKnown RBP15.04■□□□□ -0
RUNX1T1-227ENST00000520724 ZBTB47Q9UFB7 747 aaPredicted RBP15.04■□□□□ -0
RUNX1T1-227ENST00000520724 ANKRD30BQ9BXX2 1392 aa15.03■□□□□ -0
RUNX1T1-227ENST00000520724 SLIT2O94813 1529 aa15.03■□□□□ -0
RUNX1T1-227ENST00000520724 RALGAPBQ86X10 1494 aa15.03■□□□□ -0
RUNX1T1-227ENST00000520724 DEFB132Q7Z7B7 95 aa15.02■□□□□ -0
RUNX1T1-227ENST00000520724 TEX2Q8IWB9 1127 aa15.02■□□□□ -0
RUNX1T1-227ENST00000520724 GSE1Q14687 1217 aa15.02□□□□□ -0.01
RUNX1T1-227ENST00000520724 PIK3C2GO75747 1445 aa15.02□□□□□ -0.01
RUNX1T1-227ENST00000520724 YTHDC2Q9H6S0 1430 aaKnown RBP15.02□□□□□ -0.01
RUNX1T1-227ENST00000520724 SAFB2Q14151 953 aaKnown RBP eCLIP15.01□□□□□ -0.01
RUNX1T1-227ENST00000520724 TPRNQ4KMQ1 711 aa15.01□□□□□ -0.01
RUNX1T1-227ENST00000520724 CFAP70Q5T0N1 1121 aa15.01□□□□□ -0.01
RUNX1T1-227ENST00000520724 C14orf93Q9H972 538 aaKnown RBP15.01□□□□□ -0.01
RUNX1T1-227ENST00000520724 PHF8Q9UPP1 1060 aa15.01□□□□□ -0.01
RUNX1T1-227ENST00000520724 SEPT12Q8IYM1 358 aa15□□□□□ -0.01
RUNX1T1-227ENST00000520724 GLI3P10071 1580 aa15□□□□□ -0.01
RUNX1T1-227ENST00000520724 SIRT1Q96EB6 747 aa14.99□□□□□ -0.01
RUNX1T1-227ENST00000520724 FTSJ3Q8IY81 847 aaKnown RBP14.99□□□□□ -0.01
RUNX1T1-227ENST00000520724 FAM83GA6ND36 823 aa14.98□□□□□ -0.01
RUNX1T1-227ENST00000520724 CNGB1Q14028 1251 aaPredicted RBP14.98□□□□□ -0.01
RUNX1T1-227ENST00000520724 LMOD2Q6P5Q4 547 aa14.98□□□□□ -0.01
RUNX1T1-227ENST00000520724 PRAM1Q96QH2 718 aa14.98□□□□□ -0.01
RUNX1T1-227ENST00000520724 MARF1Q9Y4F3 1742 aaKnown RBP14.98□□□□□ -0.01
RUNX1T1-227ENST00000520724 PPM1GO15355 546 aaPredicted RBP14.98□□□□□ -0.01
RUNX1T1-227ENST00000520724 ANP32AP39687 249 aaKnown RBP14.98□□□□□ -0.01
RUNX1T1-227ENST00000520724 PMFBP1Q8TBY8 1022 aa14.98□□□□□ -0.01
RUNX1T1-227ENST00000520724 ZFP91Q96JP5 570 aaPredicted RBP14.98□□□□□ -0.01
RUNX1T1-227ENST00000520724 ONECUT3O60422 494 aaPredicted RBP14.97□□□□□ -0.01
RUNX1T1-227ENST00000520724 NCLP19338 710 aaKnown RBP14.97□□□□□ -0.01
RUNX1T1-227ENST00000520724 VPS72Q15906 364 aa14.97□□□□□ -0.01
RUNX1T1-227ENST00000520724 BLMP54132 1417 aaPredicted RBP14.97□□□□□ -0.01
RUNX1T1-227ENST00000520724 RGS3P49796 1198 aa14.96□□□□□ -0.01
RUNX1T1-227ENST00000520724 PSME1Q06323 249 aa14.96□□□□□ -0.01
RUNX1T1-227ENST00000520724 FMN2Q9NZ56 1722 aa14.96□□□□□ -0.01
RUNX1T1-227ENST00000520724 CCDC9Q9Y3X0 531 aaKnown RBP14.96□□□□□ -0.01
RUNX1T1-227ENST00000520724 PDCL3Q9H2J4 239 aa14.95□□□□□ -0.02
RUNX1T1-227ENST00000520724 TNS3Q68CZ2 1445 aa14.95□□□□□ -0.02
RUNX1T1-227ENST00000520724 IFT172Q9UG01 1749 aa14.95□□□□□ -0.02
RUNX1T1-227ENST00000520724 HSP90B1P14625 803 aaKnown RBP14.94□□□□□ -0.02
RUNX1T1-227ENST00000520724 DHX57Q6P158 1386 aaKnown RBP14.94□□□□□ -0.02
RUNX1T1-227ENST00000520724 USP32Q8NFA0 1604 aa14.94□□□□□ -0.02
RUNX1T1-227ENST00000520724 KRT27Q7Z3Y8 459 aa14.93□□□□□ -0.02
RUNX1T1-227ENST00000520724 HIRIP3Q9BW71 556 aaPredicted RBP14.93□□□□□ -0.02
RUNX1T1-227ENST00000520724 KNDC1Q76NI1 1749 aa14.93□□□□□ -0.02
RUNX1T1-227ENST00000520724 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.93□□□□□ -0.02
RUNX1T1-227ENST00000520724 RGPD8O14715 1765 aaPredicted RBP14.93□□□□□ -0.02
RUNX1T1-227ENST00000520724 SBNO1A3KN83 1393 aa14.93□□□□□ -0.02
RUNX1T1-227ENST00000520724 NRXN1Q9ULB1 1477 aa14.92□□□□□ -0.02
RUNX1T1-227ENST00000520724 BRWD3Q6RI45 1802 aa14.92□□□□□ -0.02
RUNX1T1-227ENST00000520724 POGKQ9P215 609 aa14.92□□□□□ -0.02
RUNX1T1-227ENST00000520724 KIF1AQ12756 1690 aa14.91□□□□□ -0.02
RUNX1T1-227ENST00000520724 SF3B2Q13435 895 aaKnown RBP14.91□□□□□ -0.02
RUNX1T1-227ENST00000520724 FAM98CQ17RN3 349 aaKnown RBP14.9□□□□□ -0.02
RUNX1T1-227ENST00000520724 FAM182BQ5T319 152 aa14.9□□□□□ -0.02
RUNX1T1-227ENST00000520724 BTG4Q9NY30 223 aa14.9□□□□□ -0.02
RUNX1T1-227ENST00000520724 TRAK1Q9UPV9 953 aa14.9□□□□□ -0.02
RUNX1T1-227ENST00000520724 PRR36Q9H6K5 1346 aa14.9□□□□□ -0.02
RUNX1T1-227ENST00000520724 ARHGEF10O15013 1369 aa14.89□□□□□ -0.03
RUNX1T1-227ENST00000520724 A0A0G2JS52 829 aa14.89□□□□□ -0.03
RUNX1T1-227ENST00000520724 PSDA5PKW4 1024 aaPredicted RBP14.89□□□□□ -0.03
RUNX1T1-227ENST00000520724 PPP4R2Q9NY27 417 aa14.88□□□□□ -0.03
RUNX1T1-227ENST00000520724 MINK1Q8N4C8 1332 aaPredicted RBP14.88□□□□□ -0.03
RUNX1T1-227ENST00000520724 SECISBP2LQ93073 1101 aaKnown RBP14.87□□□□□ -0.03
RUNX1T1-227ENST00000520724 KDM2AQ9Y2K7 1162 aa14.87□□□□□ -0.03
RUNX1T1-227ENST00000520724 PLCH1Q4KWH8 1693 aa14.85□□□□□ -0.03
RUNX1T1-227ENST00000520724 EN1Q05925 392 aaPredicted RBP14.85□□□□□ -0.03
RUNX1T1-227ENST00000520724 ANKARQ7Z5J8 1434 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms